BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5492.p (287 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777734.1| arogenate dehydratase [Herbaspirillum serope... 465 e-129 ref|YP_004755029.1| cyclohexadienyl dehydratase [Collimonas fung... 342 3e-92 ref|YP_002909988.1| Prephenate dehydratase [Burkholderia glumae ... 340 2e-91 ref|YP_001117977.1| cyclohexadienyl dehydratase [Burkholderia vi... 335 5e-90 ref|YP_001806827.1| arogenate dehydratase [Burkholderia ambifari... 332 3e-89 >ref|YP_003777734.1| arogenate dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ65826.1| arogenate dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 219/232 (94%), Positives = 226/232 (97%) Query: 56 SRLDQVIKAGKLRICMTGDYKPFTYYRPDQTFEGMDVELGQALAKSLGVEAQFVKTTWST 115 SRLDQVIKAGKLRICMTGDYKPFTYYRPDQ+FEGMDVELGQALAKSLGVEAQF+KTTWS Sbjct: 36 SRLDQVIKAGKLRICMTGDYKPFTYYRPDQSFEGMDVELGQALAKSLGVEAQFIKTTWSN 95 Query: 116 LMNDFIAQCDVAMGGVSITLDRARRAAFSEPVMVDGKAPIIRCADKDKFRNFDMIDQPGT 175 LMNDFIAQCD+AMGGVSITLDRAR+AAFSEP MVDGKAPIIRCADKDKFRNFDMIDQPGT Sbjct: 96 LMNDFIAQCDIAMGGVSITLDRARKAAFSEPTMVDGKAPIIRCADKDKFRNFDMIDQPGT 155 Query: 176 RAIVNPGGTNERFAKARYKNATLLQHPDNVTIFQQIIDGKADVMVTDASETLWQSKLHPE 235 RAIVNPGGTNERFA+ARYK ATL HPDNVTIFQQI+DGKADVMVTDASETLWQSKLHPE Sbjct: 156 RAIVNPGGTNERFARARYKRATLTLHPDNVTIFQQIVDGKADVMVTDASETLWQSKLHPE 215 Query: 236 LCPVQPDQPLQFAEKAYLLPRGDVAFKAYVDTWLHLAKATGEYQRIFDKWLK 287 LCPV PDQPLQFAEKAYLLPRGDVAFKAYVDTWLHLAKATGEYQ+IFDKWLK Sbjct: 216 LCPVTPDQPLQFAEKAYLLPRGDVAFKAYVDTWLHLAKATGEYQQIFDKWLK 267 >ref|YP_004755029.1| cyclohexadienyl dehydratase [Collimonas fungivorans Ter331] gb|AEK64206.1| Cyclohexadienyl dehydratase [Collimonas fungivorans Ter331] Length = 263 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 156/232 (67%), Positives = 199/232 (85%) Query: 56 SRLDQVIKAGKLRICMTGDYKPFTYYRPDQTFEGMDVELGQALAKSLGVEAQFVKTTWST 115 SRLD+V+K+G LR+CMTGDYKPFT+++ D +FEG+DV+L ++LAK+LGVEA+FVKT+W+ Sbjct: 32 SRLDEVVKSGNLRVCMTGDYKPFTFFKSDNSFEGIDVDLARSLAKALGVEARFVKTSWTN 91 Query: 116 LMNDFIAQCDVAMGGVSITLDRARRAAFSEPVMVDGKAPIIRCADKDKFRNFDMIDQPGT 175 L DF+ +CD+AMGGVS+TL+R ++ +FS P MVDGKA I RCAD KF++ IDQP T Sbjct: 92 LTGDFLEKCDIAMGGVSVTLERQKKVSFSAPHMVDGKAAIARCADAAKFQSLAAIDQPST 151 Query: 176 RAIVNPGGTNERFAKARYKNATLLQHPDNVTIFQQIIDGKADVMVTDASETLWQSKLHPE 235 RAIVNPGGTNERFA+A YK A L+ HPDNVTIF QI+ GKADVMVTDASETLWQ+KLHP+ Sbjct: 152 RAIVNPGGTNERFARANYKQAQLILHPDNVTIFDQIVQGKADVMVTDASETLWQAKLHPQ 211 Query: 236 LCPVQPDQPLQFAEKAYLLPRGDVAFKAYVDTWLHLAKATGEYQRIFDKWLK 287 LC ++P+QPLQF+EKA++LPRGDV FK +VDTW+H KATG+Y R+ ++WLK Sbjct: 212 LCSIRPEQPLQFSEKAFMLPRGDVPFKEFVDTWMHQLKATGDYDRVVNQWLK 263 >ref|YP_002909988.1| Prephenate dehydratase [Burkholderia glumae BGR1] gb|ACR27284.1| Prephenate dehydratase [Burkholderia glumae BGR1] Length = 263 Score = 340 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 154/242 (63%), Positives = 190/242 (78%) Query: 46 AARADDAIPASRLDQVIKAGKLRICMTGDYKPFTYYRPDQTFEGMDVELGQALAKSLGVE 105 ++ A PASRLD V+ G LR+C TGDY+P++YYRPD FEG+D++L ++LA+SLGV Sbjct: 22 SSAATPPTPASRLDAVLARGTLRVCTTGDYRPYSYYRPDGRFEGIDIDLAESLARSLGVR 81 Query: 106 AQFVKTTWSTLMNDFIAQCDVAMGGVSITLDRARRAAFSEPVMVDGKAPIIRCADKDKFR 165 A+FVKT+W TL +DF+A+CDVA+GG+S TLDR +R F+ M DGK PI+RCAD D++R Sbjct: 82 AEFVKTSWRTLTDDFVAKCDVAVGGISTTLDRQKRVFFTRATMQDGKTPIVRCADVDRYR 141 Query: 166 NFDMIDQPGTRAIVNPGGTNERFAKARYKNATLLQHPDNVTIFQQIIDGKADVMVTDASE 225 IDQP TR IVNPGGTNERFA+ +ATL +PDNVTIF+QI+DG+ADVMVTDASE Sbjct: 142 TIAQIDQPSTRVIVNPGGTNERFARQFLPHATLTVYPDNVTIFRQILDGRADVMVTDASE 201 Query: 226 TLWQSKLHPELCPVQPDQPLQFAEKAYLLPRGDVAFKAYVDTWLHLAKATGEYQRIFDKW 285 T WQ KL+P LC V PDQP QF EKAY+LPRGDV F+ YVD WLHLA+ TGE+Q I D W Sbjct: 202 TRWQQKLNPGLCSVHPDQPFQFGEKAYMLPRGDVVFQQYVDQWLHLARETGEFQSITDHW 261 Query: 286 LK 287 LK Sbjct: 262 LK 263 >ref|YP_001117977.1| cyclohexadienyl dehydratase [Burkholderia vietnamiensis G4] gb|ABO53142.1| cyclohexadienyl dehydratase [Burkholderia vietnamiensis G4] Length = 265 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 150/233 (64%), Positives = 188/233 (80%) Query: 55 ASRLDQVIKAGKLRICMTGDYKPFTYYRPDQTFEGMDVELGQALAKSLGVEAQFVKTTWS 114 +SRLD V+ G LR+C TGDYKP++YYR D FEG+D+++ ++LA SLGV+A+FVKT+WS Sbjct: 33 SSRLDDVLARGTLRVCTTGDYKPYSYYRGDGRFEGIDIDMAESLATSLGVKAEFVKTSWS 92 Query: 115 TLMNDFIAQCDVAMGGVSITLDRARRAAFSEPVMVDGKAPIIRCADKDKFRNFDMIDQPG 174 +L NDF+A+CD+A+GGVS TL+R +R F++P +VDGK PI+RCAD DK++ ID+P Sbjct: 93 SLTNDFVAKCDIAVGGVSTTLERQKRVFFTQPYVVDGKTPIVRCADADKYQTIAQIDRPE 152 Query: 175 TRAIVNPGGTNERFAKARYKNATLLQHPDNVTIFQQIIDGKADVMVTDASETLWQSKLHP 234 TR IVNPGGTNERFAK + +A L +PDNVTIF+QI+ GKADVMVTDASETL Q KL+P Sbjct: 153 TRVIVNPGGTNERFAKQFFTHANLSVYPDNVTIFKQILAGKADVMVTDASETLLQQKLNP 212 Query: 235 ELCPVQPDQPLQFAEKAYLLPRGDVAFKAYVDTWLHLAKATGEYQRIFDKWLK 287 LC V PD+P QF EKAY++PRGDV F+ YVD WLHLA ATG YQ I DKWLK Sbjct: 213 GLCSVHPDKPFQFGEKAYMVPRGDVVFQQYVDQWLHLALATGAYQTISDKWLK 265 >ref|YP_001806827.1| arogenate dehydratase [Burkholderia ambifaria MC40-6] gb|ACB62611.1| Arogenate dehydratase [Burkholderia ambifaria MC40-6] Length = 270 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 150/233 (64%), Positives = 187/233 (80%) Query: 55 ASRLDQVIKAGKLRICMTGDYKPFTYYRPDQTFEGMDVELGQALAKSLGVEAQFVKTTWS 114 SRLD V+ G LR+C TGDYKP++YYR D FEG+D+++G++LAKSLGV+A FVKT+WS Sbjct: 38 GSRLDDVLARGTLRVCTTGDYKPYSYYRTDGRFEGIDIDMGESLAKSLGVKADFVKTSWS 97 Query: 115 TLMNDFIAQCDVAMGGVSITLDRARRAAFSEPVMVDGKAPIIRCADKDKFRNFDMIDQPG 174 L NDF+A+CD+A+GG+S TL+R +R F++P +VDGK I RCAD DK++ ID+P Sbjct: 98 NLTNDFVAKCDIAVGGISTTLERQKRVFFTQPYVVDGKTAIARCADADKYQTVAQIDRPE 157 Query: 175 TRAIVNPGGTNERFAKARYKNATLLQHPDNVTIFQQIIDGKADVMVTDASETLWQSKLHP 234 TR IVNPGGTNERFAK + +A L +PDNVTIF+QI+ GKADVMVTDASETL Q KL+P Sbjct: 158 TRVIVNPGGTNERFAKQFFTHANLTVYPDNVTIFKQILAGKADVMVTDASETLLQQKLNP 217 Query: 235 ELCPVQPDQPLQFAEKAYLLPRGDVAFKAYVDTWLHLAKATGEYQRIFDKWLK 287 LC V PD+P QF EKAY++PRGDVAF+ YVD WLHLA ++GEYQ I DKWLK Sbjct: 218 GLCSVHPDKPFQFGEKAYMVPRGDVAFQQYVDQWLHLALSSGEYQAISDKWLK 270