BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5484.p (317 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777727.1| methionyl-tRNA formyltransferase [Herbaspiri... 530 e-148 ref|YP_001098484.1| methionyl-tRNA formyltransferase [Herminiimo... 437 e-120 ref|YP_004754754.1| methionyl-tRNA formyltransferase [Collimonas... 422 e-116 ref|YP_001351834.1| methionyl-tRNA formyltransferase [Janthinoba... 416 e-114 ref|ZP_08275971.1| Methionyl-tRNA formyltransferase [Oxalobacter... 399 e-109 >ref|YP_003777727.1| methionyl-tRNA formyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ65819.1| methionyl-tRNA formyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 317 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 293/317 (92%), Positives = 308/317 (97%) Query: 1 MKIIFAGTPEFAAVALEALYAAGHEITLVLTQPDRPAGRGMQLQASPVKQCAIKHGTPVA 60 MKIIFAGTPEFAAVALEALYAAGHEITLVLTQPDRPAGRGMQLQASPVKQCA+KHGTPVA Sbjct: 1 MKIIFAGTPEFAAVALEALYAAGHEITLVLTQPDRPAGRGMQLQASPVKQCALKHGTPVA 60 Query: 61 QPVSLRLNGKYPDVAQEAHALLQSTPHDVMVVAAYGLILPRSVLDIPRLGCINIHGSLLP 120 QPVSLRL+GKYP+VAQEAHALL+STPHDVM+VAAYGLILPRSVLDIPR GCINIHGSLLP Sbjct: 61 QPVSLRLDGKYPEVAQEAHALLRSTPHDVMIVAAYGLILPRSVLDIPRYGCINIHGSLLP 120 Query: 121 RWRGAAPIHRAIEAGDTETGITIMQMEEGLDTGPMMLIESVPIAEDDTTGSLHDKLAALG 180 RWRGAAPIHRAIEAGD ETGITIMQMEEGLDTGPMMLIES+PI+++DTTGSLHDKLAALG Sbjct: 121 RWRGAAPIHRAIEAGDAETGITIMQMEEGLDTGPMMLIESLPISDEDTTGSLHDKLAALG 180 Query: 181 GKMIVEAIARLEQGTLPATPQPEEGANYAAKIAKEEAALDFTQSAEQLARRIRAFNPFPG 240 KMIVEA+ +LEQGTLPATPQPE+GANYAAKIAKEEAALDF+QSAEQLARRIRAFNPFPG Sbjct: 181 AKMIVEAMEKLEQGTLPATPQPEQGANYAAKIAKEEAALDFSQSAEQLARRIRAFNPFPG 240 Query: 241 ATGRFGDTVVKLWQARPVKVAQPGEPGQVLSADAQAGIVVACGEGALLLTELQKPGGKRL 300 ATGRFGDTVVKLW+AR V VAQ GEPGQVLSADAQ GIVVACGEGALLLTELQKPGGKRL Sbjct: 241 ATGRFGDTVVKLWKARAVTVAQQGEPGQVLSADAQGGIVVACGEGALLLTELQKPGGKRL 300 Query: 301 PAAEFLKGFPLEGGRFA 317 PAAEFLKGFP+EGGR A Sbjct: 301 PAAEFLKGFPMEGGRLA 317 >ref|YP_001098484.1| methionyl-tRNA formyltransferase [Herminiimonas arsenicoxydans] sp|A4G1G8|FMT_HERAR RecName: Full=Methionyl-tRNA formyltransferase emb|CAL60355.1| Methionyl-tRNA formyltransferase [Herminiimonas arsenicoxydans] Length = 317 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 243/316 (76%), Positives = 273/316 (86%) Query: 1 MKIIFAGTPEFAAVALEALYAAGHEITLVLTQPDRPAGRGMQLQASPVKQCAIKHGTPVA 60 MKIIFAGTPEFAAVAL AL+AAG EI LVLTQPDRPAGRGMQLQAS VKQ A+ H PVA Sbjct: 1 MKIIFAGTPEFAAVALAALHAAGFEIPLVLTQPDRPAGRGMQLQASAVKQFALAHKIPVA 60 Query: 61 QPVSLRLNGKYPDVAQEAHALLQSTPHDVMVVAAYGLILPRSVLDIPRLGCINIHGSLLP 120 QP+SLRL+GKYPDVAQEAH LL++TPHDVMVVAAYGLILP+SVLDIP LGC+NIH SLLP Sbjct: 61 QPISLRLDGKYPDVAQEAHDLLRATPHDVMVVAAYGLILPQSVLDIPPLGCLNIHASLLP 120 Query: 121 RWRGAAPIHRAIEAGDTETGITIMQMEEGLDTGPMMLIESVPIAEDDTTGSLHDKLAALG 180 RWRGAAPIHRAIE GD +TGITIMQME GLDTGPM+L+ES+PIA DDTT SLHDKLA LG Sbjct: 121 RWRGAAPIHRAIEVGDEKTGITIMQMELGLDTGPMLLMESLPIAADDTTASLHDKLARLG 180 Query: 181 GKMIVEAIARLEQGTLPATPQPEEGANYAAKIAKEEAALDFTQSAEQLARRIRAFNPFPG 240 G+MIVEA+ +LE+G L ATPQPE GANYAAKIAKEEA LD QSA++LAR+IRAFNPFPG Sbjct: 181 GEMIVEALLKLEKGELTATPQPEAGANYAAKIAKEEATLDLRQSAQELARKIRAFNPFPG 240 Query: 241 ATGRFGDTVVKLWQARPVKVAQPGEPGQVLSADAQAGIVVACGEGALLLTELQKPGGKRL 300 A G T VK WQA+ ++ + GQV+SA+AQ G+V+ACG+GAL +TELQKPGGKRL Sbjct: 241 AMGICNGTPVKFWQAQALECSNQWPAGQVISANAQDGVVIACGDGALRVTELQKPGGKRL 300 Query: 301 PAAEFLKGFPLEGGRF 316 PAAEF+KGF LE RF Sbjct: 301 PAAEFIKGFALEAQRF 316 >ref|YP_004754754.1| methionyl-tRNA formyltransferase [Collimonas fungivorans Ter331] gb|AEK63931.1| Methionyl-tRNA formyltransferase [Collimonas fungivorans Ter331] Length = 339 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 233/316 (73%), Positives = 265/316 (83%) Query: 1 MKIIFAGTPEFAAVALEALYAAGHEITLVLTQPDRPAGRGMQLQASPVKQCAIKHGTPVA 60 MKIIFAGTPEFAAVAL+AL+ AGH++ LVLTQPDRPAGRGMQL ASPVKQ A+ H VA Sbjct: 23 MKIIFAGTPEFAAVALKALHDAGHQVPLVLTQPDRPAGRGMQLHASPVKQFALDHQIAVA 82 Query: 61 QPVSLRLNGKYPDVAQEAHALLQSTPHDVMVVAAYGLILPRSVLDIPRLGCINIHGSLLP 120 QPVSLRL+GKYPDVA+EAHALLQ+TPHD+MVVAAYGLILP SVLDIP GC+NIHGSLLP Sbjct: 83 QPVSLRLDGKYPDVAREAHALLQATPHDIMVVAAYGLILPSSVLDIPPRGCLNIHGSLLP 142 Query: 121 RWRGAAPIHRAIEAGDTETGITIMQMEEGLDTGPMMLIESVPIAEDDTTGSLHDKLAALG 180 RWRGAAPIHRAIEAGD+ETGITIMQM++GLDTG M+LIE + I DTTG+LHDK+A LG Sbjct: 143 RWRGAAPIHRAIEAGDSETGITIMQMDQGLDTGAMLLIEKMTIGASDTTGTLHDKMAKLG 202 Query: 181 GKMIVEAIARLEQGTLPATPQPEEGANYAAKIAKEEAALDFTQSAEQLARRIRAFNPFPG 240 G +IVEA+ RLEQ LPATPQPE+G YAAKI+KEEAALDF+ AE L R+IRAFNPFP Sbjct: 203 GDLIVEALRRLEQNVLPATPQPEQGVTYAAKISKEEAALDFSLPAEVLERKIRAFNPFPA 262 Query: 241 ATGRFGDTVVKLWQARPVKVAQPGEPGQVLSADAQAGIVVACGEGALLLTELQKPGGKRL 300 A F +KLWQA+ + G V+SAD Q G++VACG GAL +TELQKPGGKRL Sbjct: 263 AAAVFAGVTLKLWQAQVIAADGKHAAGTVISADPQDGVIVACGSGALRITELQKPGGKRL 322 Query: 301 PAAEFLKGFPLEGGRF 316 PAAEFLK FP++GGRF Sbjct: 323 PAAEFLKAFPMQGGRF 338 >ref|YP_001351834.1| methionyl-tRNA formyltransferase [Janthinobacterium sp. Marseille] sp|A6SU87|FMT_JANMA RecName: Full=Methionyl-tRNA formyltransferase gb|ABR88409.1| methionyl-tRNA formyltransferase [Janthinobacterium sp. Marseille] Length = 316 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 232/316 (73%), Positives = 263/316 (83%), Gaps = 1/316 (0%) Query: 1 MKIIFAGTPEFAAVALEALYAAGHEITLVLTQPDRPAGRGMQLQASPVKQCAIKHGTPVA 60 MKIIFAGTPEFAAVAL AL+AAG EI LVLTQPDRPAGRGMQL AS VKQ A+ H PVA Sbjct: 1 MKIIFAGTPEFAAVALAALHAAGFEIPLVLTQPDRPAGRGMQLHASAVKQFALAHDIPVA 60 Query: 61 QPVSLRLNGKYPDVAQEAHALLQSTPHDVMVVAAYGLILPRSVLDIPRLGCINIHGSLLP 120 QPVSLRL+GKYP+VA EAHALL++TPHDVMVVAAYGLILP+S+LDIP GCINIH SLLP Sbjct: 61 QPVSLRLDGKYPEVAAEAHALLKATPHDVMVVAAYGLILPQSILDIPPRGCINIHASLLP 120 Query: 121 RWRGAAPIHRAIEAGDTETGITIMQMEEGLDTGPMMLIESVPIAEDDTTGSLHDKLAALG 180 RWRGAAPIHRAIE+GD ETG+TIMQME GLDTGPM+ ++ +PI DDTT SLHDKLA LG Sbjct: 121 RWRGAAPIHRAIESGDAETGVTIMQMELGLDTGPMLAMQRLPITADDTTASLHDKLATLG 180 Query: 181 GKMIVEAIARLEQGTLPATPQPEEGANYAAKIAKEEAALDFTQSAEQLARRIRAFNPFPG 240 G+MIV+ + R+EQG LPA PQP +GANYAAKI KEEA LDFTQ AEQLAR+IRAFNPFPG Sbjct: 181 GEMIVQTLRRMEQGDLPAEPQP-DGANYAAKILKEEATLDFTQPAEQLARKIRAFNPFPG 239 Query: 241 ATGRFGDTVVKLWQARPVKVAQPGEPGQVLSADAQAGIVVACGEGALLLTELQKPGGKRL 300 A T++K W A+ V + PGQV++A+ G++VACG+GAL +TELQKPGGKRL Sbjct: 240 AAATCDGTLIKFWHAQAVPASNQLPPGQVIAANPHDGVLVACGDGALRVTELQKPGGKRL 299 Query: 301 PAAEFLKGFPLEGGRF 316 A EFLKGF LE RF Sbjct: 300 SAVEFLKGFTLEDKRF 315 >ref|ZP_08275971.1| Methionyl-tRNA formyltransferase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30552.1| Methionyl-tRNA formyltransferase [Oxalobacteraceae bacterium IMCC9480] Length = 323 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 226/317 (71%), Positives = 263/317 (82%) Query: 1 MKIIFAGTPEFAAVALEALYAAGHEITLVLTQPDRPAGRGMQLQASPVKQCAIKHGTPVA 60 MKIIFAGTPEFAAVAL A++AAG +I LVLTQPDRPAGRGMQL AS VKQ A+ HG PVA Sbjct: 1 MKIIFAGTPEFAAVALAAIHAAGFDIPLVLTQPDRPAGRGMQLHASAVKQFALAHGIPVA 60 Query: 61 QPVSLRLNGKYPDVAQEAHALLQSTPHDVMVVAAYGLILPRSVLDIPRLGCINIHGSLLP 120 QPVSLRL+GKYPDVA EA ALL++T HDVMVVAAYGLILP SVL IP GC+NIH SLLP Sbjct: 61 QPVSLRLDGKYPDVASEADALLRATAHDVMVVAAYGLILPPSVLAIPPSGCLNIHASLLP 120 Query: 121 RWRGAAPIHRAIEAGDTETGITIMQMEEGLDTGPMMLIESVPIAEDDTTGSLHDKLAALG 180 RWRGAAPIHRAIEAGD ETGITIMQM++GLDTGPM+L+E + I DDTTGSLHD+LA LG Sbjct: 121 RWRGAAPIHRAIEAGDPETGITIMQMDKGLDTGPMLLVERLAIDADDTTGSLHDRLATLG 180 Query: 181 GKMIVEAIARLEQGTLPATPQPEEGANYAAKIAKEEAALDFTQSAEQLARRIRAFNPFPG 240 GK+IV+A+ +LE+G L AT QPE G YAAKI+KEEAALDF Q AE LAR+IRAF+P PG Sbjct: 181 GKLIVDALRQLERGPLLATEQPETGTCYAAKISKEEAALDFAQPAELLARKIRAFHPAPG 240 Query: 241 ATGRFGDTVVKLWQARPVKVAQPGEPGQVLSADAQAGIVVACGEGALLLTELQKPGGKRL 300 A+ G +K+W+A V ++ PG++++ADA +G+V+ACG AL LTELQKPGGKRL Sbjct: 241 ASALIGGVAIKIWRAEVVACSELALPGEIIAADAVSGLVIACGHSALRLTELQKPGGKRL 300 Query: 301 PAAEFLKGFPLEGGRFA 317 PA+EFLKGFP+ G A Sbjct: 301 PASEFLKGFPIAAGTCA 317