BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.5471.p         (149 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_06144430.1| hypothetical protein RflaF_14557 [Ruminococcu...    58   4e-07

>ref|ZP_06144430.1| hypothetical protein RflaF_14557 [Ruminococcus flavefaciens FD-1]
          Length = 192

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/80 (38%), Positives = 45/80 (56%)

Query: 64  SLIALCKKIALPGIVLYLEAEYFGGVGTQACAVINGGELVSGPIVGADAINSALALVGVN 123
           S+I   K+ +L G +LY+E ++FGG GTQA  +   GE+ S P+ G   +N  L L+GV 
Sbjct: 113 SVICFLKECSLEGQLLYMETDFFGGYGTQAGVIFENGEMKSEPMDGDGTVNRLLGLLGVR 172

Query: 124 VSEDEDGFRVVGLNKCRDTD 143
               +D F  + L K R  D
Sbjct: 173 KHLLKDEFDSLELYKYRRMD 192