BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5464.p (416 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777721.1| oxalate/formate antiporter protein [Herbaspi... 629 e-178 ref|YP_550208.1| major facilitator transporter [Polaromonas sp. ... 482 e-134 ref|YP_002942984.1| major facilitator superfamily protein [Vario... 459 e-127 ref|YP_004618013.1| transporter [Ramlibacter tataouinensis TTB31... 449 e-124 ref|YP_004416370.1| major facilitator transporter [Pusillimonas ... 442 e-122 >ref|YP_003777721.1| oxalate/formate antiporter protein [Herbaspirillum seropedicae SmR1] gb|ADJ65813.1| oxalate/formate antiporter protein [Herbaspirillum seropedicae SmR1] Length = 416 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 369/404 (91%), Positives = 386/404 (95%) Query: 13 DPHQVDSPYAVMRLCITMILMVVGASGMYVIAVVLPYVQAHYYVDRGLASMPYTLTMLGV 72 D HQ+DSPYAVMRLCITM+LMVVGASGMYVIAVVLPYVQAHYYVDRGLASMPYTLTMLGV Sbjct: 13 DRHQIDSPYAVMRLCITMVLMVVGASGMYVIAVVLPYVQAHYYVDRGLASMPYTLTMLGV 72 Query: 73 GVGGLLMGRMADRSGITRPMMLGGLCLGGGFLAASYAPDIWTFMAVHCILIGLLGTSATF 132 GVGGLLMGRMADR+GITRP+ LGGLCLGGGF+AASYAPDIWTFMAVHC+ IGLLGTSATF Sbjct: 73 GVGGLLMGRMADRAGITRPLFLGGLCLGGGFIAASYAPDIWTFMAVHCLFIGLLGTSATF 132 Query: 133 SPLVADTSLWFRKRRGIAVAVCASGNYLGGAIWPPIVQHFVDNYGWQETYRGLGLICILV 192 SPLVADTSLWFRKRRGIAVAVCASGNYLGGAIWPPIVQHFVD+ GWQ+TY G+G+ C L+ Sbjct: 133 SPLVADTSLWFRKRRGIAVAVCASGNYLGGAIWPPIVQHFVDSVGWQQTYIGMGIACSLI 192 Query: 193 MCPLALLMRARPPVQDSNAATPRAGGGPRPFGLAPGSAQLLLCVVGVACCVAMAMPQVHI 252 MC LALLMRARPP QDS+AA+ R GGGPRPFGLAPGSAQLLLCV GVACCVAMAMPQVHI Sbjct: 193 MCSLALLMRARPPAQDSSAASARPGGGPRPFGLAPGSAQLLLCVAGVACCVAMAMPQVHI 252 Query: 253 VAYCGDLGYGPARGAQMLSLMLACGVVSRLVSGAICDRIGGLRTLLLGSALQGLSLLLFI 312 VAYCGDLGYGPARGAQMLSLMLACGVVSRLVSGAICDRIGGLRTLLLGS LQGLSLLLFI Sbjct: 253 VAYCGDLGYGPARGAQMLSLMLACGVVSRLVSGAICDRIGGLRTLLLGSMLQGLSLLLFI 312 Query: 313 PFDSLASLYLISALFGLFQGGIVPSYAIIVREYFPAAEAGQRVGAVIMATMFGMALGGWM 372 PFDSLASLYLISALFGLFQGGIVPSYAIIVREYFPAAEAGQRVGAVIMATMFGMALGGW+ Sbjct: 313 PFDSLASLYLISALFGLFQGGIVPSYAIIVREYFPAAEAGQRVGAVIMATMFGMALGGWV 372 Query: 373 SGKIFDLTGSYHAAFANGIAWNLLNLGIAVLLFTRVRGMRLRAA 416 SGKIFD+TGSYHAAFANGIAWNLLNL IA+ L TRVR + LRAA Sbjct: 373 SGKIFDMTGSYHAAFANGIAWNLLNLAIALFLLTRVRSLHLRAA 416 >ref|YP_550208.1| major facilitator transporter [Polaromonas sp. JS666] gb|ABE45310.1| major facilitator superfamily MFS_1 [Polaromonas sp. JS666] Length = 394 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 276/387 (71%), Positives = 318/387 (82%), Gaps = 2/387 (0%) Query: 28 ITMILMVVGASGMYVIAVVLPYVQAHYYVDRGLASMPYTLTMLGVGVGGLLMGRMADRSG 87 IT+ LM VGASGMYV+ VVLP VQA + V R AS+PYTL M+G G+GG+LMGR+ADR G Sbjct: 2 ITLALMTVGASGMYVVPVVLPAVQADFGVARADASLPYTLLMIGFGLGGVLMGRLADRFG 61 Query: 88 ITRPMMLGGLCLGGGFLAASYAPDIWTFMAVHCILIGLLGTSATFSPLVADTSLWFRKRR 147 + P+++G + LG G+ AA+ A +IW FM H L+GLLG+SATF+PL+ADTSLWF +RR Sbjct: 62 VMVPLLIGAVGLGLGYAAAAMASNIWMFMLAHGFLVGLLGSSATFAPLLADTSLWFVRRR 121 Query: 148 GIAVAVCASGNYLGGAIWPPIVQHFVDNYGWQETYRGLGLICILVMCPLALLMRARPPVQ 207 GIAVAVCASGNY+GGAIWPP+VQHFV+ GW++TY GLGL ++ M LALLMR RPP+ Sbjct: 122 GIAVAVCASGNYVGGAIWPPVVQHFVEAVGWRQTYLGLGLFSVVTMAGLALLMRKRPPMA 181 Query: 208 DSNAATPRAGGGPR--PFGLAPGSAQLLLCVVGVACCVAMAMPQVHIVAYCGDLGYGPAR 265 + P PFGL PG AQ+LLC+ GV+CCVAMAMPQVHIV+YC DLGYG AR Sbjct: 182 VAAPVNRHFAASPSSLPFGLPPGKAQVLLCIAGVSCCVAMAMPQVHIVSYCTDLGYGAAR 241 Query: 266 GAQMLSLMLACGVVSRLVSGAICDRIGGLRTLLLGSALQGLSLLLFIPFDSLASLYLISA 325 GA+MLSLMLACGVVSRLVSG ICDRIGGLRTLLLGSALQG++LL+F+PF+ L SLYLI+A Sbjct: 242 GAEMLSLMLACGVVSRLVSGLICDRIGGLRTLLLGSALQGIALLMFLPFNGLVSLYLIAA 301 Query: 326 LFGLFQGGIVPSYAIIVREYFPAAEAGQRVGAVIMATMFGMALGGWMSGKIFDLTGSYHA 385 LFGLFQGGIVPSYAIIVREYF AEAG RVG VIMATMFGMALGGWMSGK+FDLTGSY A Sbjct: 302 LFGLFQGGIVPSYAIIVREYFLPAEAGARVGTVIMATMFGMALGGWMSGKVFDLTGSYQA 361 Query: 386 AFANGIAWNLLNLGIAVLLFTRVRGMR 412 AF NGIAWNLLNLGIAV L RVR R Sbjct: 362 AFLNGIAWNLLNLGIAVFLLWRVRPPR 388 >ref|YP_002942984.1| major facilitator superfamily protein [Variovorax paradoxus S110] gb|ACS17718.1| major facilitator superfamily MFS_1 [Variovorax paradoxus S110] Length = 417 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 277/410 (67%), Positives = 326/410 (79%), Gaps = 5/410 (1%) Query: 12 TDPHQVDSPYAVMRLCITMILMVVGASGMYVIAVVLPYVQAHYYVDRGLASMPYTLTMLG 71 T H DS YA++RL +T+++M VG+SGMYV++V+LP VQA + + R AS+PYTL MLG Sbjct: 6 TSAHAADSRYAMLRLGLTLLVMTVGSSGMYVVSVMLPAVQAEFGIARADASLPYTLLMLG 65 Query: 72 VGVGGLLMGRMADRSGITRPMMLGGLCLGGGFLAASYAPDIWTFMAVHCILIGLLGTSAT 131 GVGG+LMGR+ADR G+ P+++G L LG G++A A I +F +L+GLLG++A Sbjct: 66 FGVGGVLMGRLADRFGVMWPLLIGALSLGVGYVACGMADGIVSFTLAQAVLVGLLGSAAA 125 Query: 132 FSPLVADTSLWFRKRRGIAVAVCASGNYLGGAIWPPIVQHFVDNYGWQETYRGLGLICIL 191 F+PLVADTSLWF KRRGIAVAVCASGNY+ GAIWPPI QHF++ GW++TY G+GL C L Sbjct: 126 FAPLVADTSLWFVKRRGIAVAVCASGNYVAGAIWPPIAQHFIETVGWRQTYIGMGLFCGL 185 Query: 192 VMCPLALLMRARPPVQDSNAATPRAGGG-----PRPFGLAPGSAQLLLCVVGVACCVAMA 246 M LAL RARPP + A+ G RPFG + G+AQ LLCV GVACCVAMA Sbjct: 186 AMAALALFFRARPPAVAAAPASHAGHAGRRRDMTRPFGFSMGTAQGLLCVAGVACCVAMA 245 Query: 247 MPQVHIVAYCGDLGYGPARGAQMLSLMLACGVVSRLVSGAICDRIGGLRTLLLGSALQGL 306 MPQVHIVAYCGDLGYGPA+GAQMLSLML GVVSRLVSGAICDRIGGLRTLLLG ALQG+ Sbjct: 246 MPQVHIVAYCGDLGYGPAQGAQMLSLMLGFGVVSRLVSGAICDRIGGLRTLLLGGALQGV 305 Query: 307 SLLLFIPFDSLASLYLISALFGLFQGGIVPSYAIIVREYFPAAEAGQRVGAVIMATMFGM 366 +LLLF+PFD L SLY+ISALFGLFQGGIVPSYAIIVRE+FP EAG RVG V+M T+FGM Sbjct: 306 ALLLFLPFDGLVSLYVISALFGLFQGGIVPSYAIIVREHFPPEEAGARVGTVLMFTLFGM 365 Query: 367 ALGGWMSGKIFDLTGSYHAAFANGIAWNLLNLGIAVLLFTRVRGMRLRAA 416 ALGGWMSGK+FDLTGSYHAAF NGI WNLLN+ IA +L RVR +RLR A Sbjct: 366 ALGGWMSGKVFDLTGSYHAAFLNGIGWNLLNVSIAAMLLFRVRHLRLRTA 415 >ref|YP_004618013.1| transporter [Ramlibacter tataouinensis TTB310] gb|AEG91994.1| Candidate transporter [Ramlibacter tataouinensis TTB310] Length = 423 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 265/405 (65%), Positives = 317/405 (78%), Gaps = 3/405 (0%) Query: 8 SPAPTDPHQVDSPYAVMRLCITMILMVVGASGMYVIAVVLPYVQAHYYVDRGLASMPYTL 67 S P DP +DS YA MRL T+ L+ +G SGMYV+AVVLP VQA + VDR AS+PYTL Sbjct: 2 SSLPADPGLIDSRYAAMRLLTTLALVTLGNSGMYVVAVVLPAVQAEFGVDRADASLPYTL 61 Query: 68 TMLGVGVGGLLMGRMADRSGITRPMMLGGLCLGGGFLAASYAPDIWTFMAVHCILIGLLG 127 M+G+G+GGL G+ ADR GI R + +G + GGF A A +W+F H +L+GLLG Sbjct: 62 MMVGLGIGGLFTGKWADRYGIARVLAIGAAAVFGGFAWAGMADSLWSFALAHGLLLGLLG 121 Query: 128 TSATFSPLVADTSLWFRKRRGIAVAVCASGNYLGGAIWPPIVQHFVDNYGWQETYRGLGL 187 +S+TF+PL+ADTSLW+ +RRGIAVAVCASGNY+ GA+WPP+VQ V+ GW++TY LGL Sbjct: 122 SSSTFAPLLADTSLWWNRRRGIAVAVCASGNYVAGAVWPPLVQWGVEEIGWRQTYLLLGL 181 Query: 188 ICILVMCPLALLMRARPPV---QDSNAATPRAGGGPRPFGLAPGSAQLLLCVVGVACCVA 244 +C + M L+L MR RPP+ + A RPFGL PG AQLLLC+ GVACCVA Sbjct: 182 VCGVGMALLSLRMRQRPPLVVAAPAAKGLAAAADATRPFGLRPGHAQLLLCIAGVACCVA 241 Query: 245 MAMPQVHIVAYCGDLGYGPARGAQMLSLMLACGVVSRLVSGAICDRIGGLRTLLLGSALQ 304 M+MPQVHIVAYC DLG+G ARGA+MLSLMLACG+VSRLVSG ICDRIGG+RTLLLGSALQ Sbjct: 242 MSMPQVHIVAYCADLGFGAARGAEMLSLMLACGIVSRLVSGLICDRIGGIRTLLLGSALQ 301 Query: 305 GLSLLLFIPFDSLASLYLISALFGLFQGGIVPSYAIIVREYFPAAEAGQRVGAVIMATMF 364 G++LL+F+PFD L SLYL+SALFGLFQGGIVP+YAIIVRE+FP EAG RVGAVIMAT+ Sbjct: 302 GIALLMFLPFDGLVSLYLVSALFGLFQGGIVPAYAIIVREHFPPQEAGARVGAVIMATLL 361 Query: 365 GMALGGWMSGKIFDLTGSYHAAFANGIAWNLLNLGIAVLLFTRVR 409 GMALGGW+SG +FDLTGSY AAF NGIAWNLLNL I L+ RVR Sbjct: 362 GMALGGWLSGLVFDLTGSYDAAFLNGIAWNLLNLAIVGSLYWRVR 406 >ref|YP_004416370.1| major facilitator transporter [Pusillimonas sp. T7-7] gb|AEC19746.1| major facilitator transporter [Pusillimonas sp. T7-7] Length = 427 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 244/405 (60%), Positives = 302/405 (74%), Gaps = 12/405 (2%) Query: 17 VDSPYAVMRLCITMILMVVGASGMYVIAVVLPYVQAHYYVDRGLASMPYTLTMLGVGVGG 76 V++PYA RL ++++LM +G SGMY + VVLP +QA + + R AS+PYTLTMLG G+GG Sbjct: 11 VETPYAWARLIVSLLLMTLGGSGMYSVTVVLPQIQAEFGISRSDASLPYTLTMLGFGLGG 70 Query: 77 LLMGRMADRSGITRPMMLGGLCLGGGFLAASYAPDIWTFMAVHCILIGLLGTSATFSPLV 136 +LMGR++DR G+ P+++G L LG GF+ A A +W +LIGLLGT+A+F+PLV Sbjct: 71 ILMGRLSDRFGVVVPLVVGTLGLGTGFIWAGSATALWQLNLAQGLLIGLLGTAASFAPLV 130 Query: 137 ADTSLWFRKRRGIAVAVCASGNYLGGAIWPPIVQHFVDNYGWQETYRGLGLICILVMCPL 196 ADTS WF +RRGIA+A+C SGNYL G +WPPI+QHF+D GW++TY G+G+ C+ M PL Sbjct: 131 ADTSQWFTRRRGIALAICMSGNYLAGTVWPPILQHFIDTAGWRQTYTGVGVFCLAAMLPL 190 Query: 197 ALLMRARPP----------VQDSNAATPRAG--GGPRPFGLAPGSAQLLLCVVGVACCVA 244 AL+ R RPP V T A RP G +P + Q LLC+ GVACCVA Sbjct: 191 ALVYRRRPPSIAVGATGTTVHRQTFFTREAARFDQSRPLGFSPATLQTLLCIAGVACCVA 250 Query: 245 MAMPQVHIVAYCGDLGYGPARGAQMLSLMLACGVVSRLVSGAICDRIGGLRTLLLGSALQ 304 MAMPQVHIVAYCGDLG+G ARGA+ML+LML G++SRL SG I D IGGLRTLLLGS LQ Sbjct: 251 MAMPQVHIVAYCGDLGFGAARGAEMLALMLGLGIISRLGSGWISDHIGGLRTLLLGSVLQ 310 Query: 305 GLSLLLFIPFDSLASLYLISALFGLFQGGIVPSYAIIVREYFPAAEAGQRVGAVIMATMF 364 G++LL+F+P L SLYLIS +FGLFQGGIVP+YA+IVREYF AEAG RVG V+MAT+F Sbjct: 311 GIALLMFLPSKGLVSLYLISGMFGLFQGGIVPAYALIVREYFSPAEAGARVGTVLMATLF 370 Query: 365 GMALGGWMSGKIFDLTGSYHAAFANGIAWNLLNLGIAVLLFTRVR 409 GMALGGWMSG IFDL+GSY AAF NGIAWNLLN+ I L R + Sbjct: 371 GMALGGWMSGAIFDLSGSYQAAFVNGIAWNLLNISIIGFLLYRSK 415