BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5461.p (299 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777718.1| sporulation protein [Herbaspirillum seropedi... 558 e-157 ref|YP_004754793.1| stage V sporulation protein R [Collimonas fu... 490 e-136 ref|YP_004029284.1| Stage V sporulation protein R [Burkholderia ... 464 e-129 ref|ZP_06845848.1| SpoVR family protein [Burkholderia sp. Ch1-1]... 464 e-128 ref|YP_004228022.1| SpoVR family protein [Burkholderia sp. CCGE1... 463 e-128 >ref|YP_003777718.1| sporulation protein [Herbaspirillum seropedicae SmR1] gb|ADJ65810.1| sporulation protein [Herbaspirillum seropedicae SmR1] Length = 509 Score = 558 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 274/278 (98%), Positives = 277/278 (99%) Query: 22 PXEPQKNLLYFAEKNAPLLEPWEREVIRIVRKVGQYFYPQRQTQVMNEGWATFWHYTLLN 81 P EPQ+NLLYFAEKNAPLLEPWEREVIRIVRKVGQYFYPQRQTQVMNEGWATFWHYTLLN Sbjct: 232 PSEPQENLLYFAEKNAPLLEPWEREVIRIVRKVGQYFYPQRQTQVMNEGWATFWHYTLLN 291 Query: 82 TLYDQGRLTDGFMMEFLHSHSNVVFQPPITKPYYNGINPYALGFSMMSDIRRICENPTNE 141 TLYDQGRLTDGFMMEFLHSHSNVVFQPPITKPYYNGINPYALGFSMMSDIRRICENPT+E Sbjct: 292 TLYDQGRLTDGFMMEFLHSHSNVVFQPPITKPYYNGINPYALGFSMMSDIRRICENPTDE 351 Query: 142 DREWFPDIAGRNWLDTLQYVMRNYKDESFIAQYLSPKLMRDMRMFAVLDDEARSEIEVSA 201 DREWFPDIAGRNWLDTLQYVMRNYKDESFIAQYLSPKLMRDMRMFAVLDDE+RSEIEVSA Sbjct: 352 DREWFPDIAGRNWLDTLQYVMRNYKDESFIAQYLSPKLMRDMRMFAVLDDESRSEIEVSA 411 Query: 202 IHNERGFQYVRQALSRQYDINHREPNIQVWSVNTRGNRSLTLRHFRSDGRSLGDSTNEVL 261 IHNERGFQYVRQALSRQYDINHREPNIQVWSVNTRGNRSLTLRHFRSDGRSLGDSTNEVL Sbjct: 412 IHNERGFQYVRQALSRQYDINHREPNIQVWSVNTRGNRSLTLRHFRSDGRSLGDSTNEVL 471 Query: 262 RHMARLWQFDVYLESVDDNGYIVQRYECVAENRYALRS 299 RHMARLWQFDVYLESVDDNGYIVQRYECVAENRYALRS Sbjct: 472 RHMARLWQFDVYLESVDDNGYIVQRYECVAENRYALRS 509 >ref|YP_004754793.1| stage V sporulation protein R [Collimonas fungivorans Ter331] gb|AEK63970.1| Stage V sporulation protein R [Collimonas fungivorans Ter331] Length = 509 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 229/277 (82%), Positives = 258/277 (93%) Query: 22 PXEPQKNLLYFAEKNAPLLEPWEREVIRIVRKVGQYFYPQRQTQVMNEGWATFWHYTLLN 81 P E Q+NLLYFAEKN+PLLE WEREVIRIVRKV QYFYPQRQTQVMNEGWATFWHYT+LN Sbjct: 232 PPETQENLLYFAEKNSPLLESWEREVIRIVRKVAQYFYPQRQTQVMNEGWATFWHYTILN 291 Query: 82 TLYDQGRLTDGFMMEFLHSHSNVVFQPPITKPYYNGINPYALGFSMMSDIRRICENPTNE 141 TLYD+G+LTDGFMMEFLHSHSNVV+QPP+TK YY+G+NPYALGF MMSDIRRICE PT+E Sbjct: 292 TLYDEGKLTDGFMMEFLHSHSNVVYQPPVTKSYYSGMNPYALGFGMMSDIRRICEKPTDE 351 Query: 142 DREWFPDIAGRNWLDTLQYVMRNYKDESFIAQYLSPKLMRDMRMFAVLDDEARSEIEVSA 201 DR+WFP++AG WL+TL Y MRN+KDESF+AQYLSPKL+RDMR+FAVLDDE RSE+EVSA Sbjct: 352 DRQWFPELAGTPWLETLHYAMRNFKDESFVAQYLSPKLIRDMRLFAVLDDENRSELEVSA 411 Query: 202 IHNERGFQYVRQALSRQYDINHREPNIQVWSVNTRGNRSLTLRHFRSDGRSLGDSTNEVL 261 IHN+ G+QYVRQALSRQYDINHREPNIQVWSVNTRG+RSLTLRHFRSD R L D T+E+L Sbjct: 412 IHNDAGYQYVRQALSRQYDINHREPNIQVWSVNTRGDRSLTLRHFRSDSRPLADGTDEIL 471 Query: 262 RHMARLWQFDVYLESVDDNGYIVQRYECVAENRYALR 298 RHMARLWQFDVYLESVDD+G ++QRYECV+EN+Y LR Sbjct: 472 RHMARLWQFDVYLESVDDSGNVLQRYECVSENKYVLR 508 >ref|YP_004029284.1| Stage V sporulation protein R [Burkholderia rhizoxinica HKI 454] emb|CBW75140.1| Stage V sporulation protein R [Burkholderia rhizoxinica HKI 454] Length = 540 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 212/268 (79%), Positives = 246/268 (91%) Query: 22 PXEPQKNLLYFAEKNAPLLEPWEREVIRIVRKVGQYFYPQRQTQVMNEGWATFWHYTLLN 81 P EPQ+NLLYFAEKNAPLLEPWEREVIRIVRK+GQYFYPQRQTQVMNEGWA FWHYTLLN Sbjct: 264 PPEPQENLLYFAEKNAPLLEPWEREVIRIVRKIGQYFYPQRQTQVMNEGWACFWHYTLLN 323 Query: 82 TLYDQGRLTDGFMMEFLHSHSNVVFQPPITKPYYNGINPYALGFSMMSDIRRICENPTNE 141 TLY +G+L DGFM+EFLHSHSNVV+QPP+TKPYY+GINPYALGFSMM+DIRRICE PT+E Sbjct: 324 TLYSEGKLADGFMLEFLHSHSNVVYQPPVTKPYYSGINPYALGFSMMTDIRRICEQPTDE 383 Query: 142 DREWFPDIAGRNWLDTLQYVMRNYKDESFIAQYLSPKLMRDMRMFAVLDDEARSEIEVSA 201 DR WFP++AGR WL+ L Y MRN+KDESF+AQYLSP L+RDMR+F++LDD+++ +E+SA Sbjct: 384 DRRWFPELAGRPWLEALDYAMRNFKDESFVAQYLSPSLIRDMRLFSILDDDSKEALEISA 443 Query: 202 IHNERGFQYVRQALSRQYDINHREPNIQVWSVNTRGNRSLTLRHFRSDGRSLGDSTNEVL 261 IH+E G+QYVRQALSRQYDI+HREPNIQVWSVNTRG+RSLTLRHF +D R LG T EVL Sbjct: 444 IHDESGYQYVRQALSRQYDIHHREPNIQVWSVNTRGDRSLTLRHFMTDNRHLGSDTEEVL 503 Query: 262 RHMARLWQFDVYLESVDDNGYIVQRYEC 289 +HMARLWQF+VYLESVD+NG + +RYEC Sbjct: 504 KHMARLWQFNVYLESVDENGAVRRRYEC 531 >ref|ZP_06845848.1| SpoVR family protein [Burkholderia sp. Ch1-1] gb|EFG66508.1| SpoVR family protein [Burkholderia sp. Ch1-1] Length = 576 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 214/268 (79%), Positives = 245/268 (91%) Query: 22 PXEPQKNLLYFAEKNAPLLEPWEREVIRIVRKVGQYFYPQRQTQVMNEGWATFWHYTLLN 81 P EPQ+NLLYFAEKNAPLLEPWEREVIRIVRKVGQYFYPQRQTQVMNEGWATFWHYTLLN Sbjct: 300 PPEPQENLLYFAEKNAPLLEPWEREVIRIVRKVGQYFYPQRQTQVMNEGWATFWHYTLLN 359 Query: 82 TLYDQGRLTDGFMMEFLHSHSNVVFQPPITKPYYNGINPYALGFSMMSDIRRICENPTNE 141 T+Y+QG+L DGFMMEFLHSHSNVV+QPP+TKPYY+GINPYALGFSMMSDIRRICE PT E Sbjct: 360 TMYNQGKLEDGFMMEFLHSHSNVVYQPPVTKPYYSGINPYALGFSMMSDIRRICETPTEE 419 Query: 142 DREWFPDIAGRNWLDTLQYVMRNYKDESFIAQYLSPKLMRDMRMFAVLDDEARSEIEVSA 201 DR+WFP++AG WL + Y MRN+KDESF+AQYLSP L+R+MR+F+VLDD+ R +EVSA Sbjct: 420 DRKWFPELAGSPWLPAMHYAMRNFKDESFVAQYLSPHLIREMRLFSVLDDDMRDALEVSA 479 Query: 202 IHNERGFQYVRQALSRQYDINHREPNIQVWSVNTRGNRSLTLRHFRSDGRSLGDSTNEVL 261 IH++ G+QYVRQALSRQYD++HREPNIQVWSVNTRG+RSLTLRHF SD R L ++EVL Sbjct: 480 IHDDSGYQYVRQALSRQYDMHHREPNIQVWSVNTRGDRSLTLRHFMSDNRHLSGDSDEVL 539 Query: 262 RHMARLWQFDVYLESVDDNGYIVQRYEC 289 +HMARLWQFDVYLESVD+NG + +RYEC Sbjct: 540 KHMARLWQFDVYLESVDENGTVRKRYEC 567 >ref|YP_004228022.1| SpoVR family protein [Burkholderia sp. CCGE1001] gb|ADX54962.1| SpoVR family protein [Burkholderia sp. CCGE1001] Length = 571 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 214/268 (79%), Positives = 247/268 (92%) Query: 22 PXEPQKNLLYFAEKNAPLLEPWEREVIRIVRKVGQYFYPQRQTQVMNEGWATFWHYTLLN 81 P EPQ+NLLYFAEKNAPLLEPWEREVIRIVRKVGQYFYPQRQTQVMNEGWATFWHYTLLN Sbjct: 295 PPEPQENLLYFAEKNAPLLEPWEREVIRIVRKVGQYFYPQRQTQVMNEGWATFWHYTLLN 354 Query: 82 TLYDQGRLTDGFMMEFLHSHSNVVFQPPITKPYYNGINPYALGFSMMSDIRRICENPTNE 141 T+Y+QG+L DGFMMEFLHSHSNVV+QPP+TKPYY+GINPYALGFSMMSDIRRICENPT+E Sbjct: 355 TMYNQGKLEDGFMMEFLHSHSNVVYQPPVTKPYYSGINPYALGFSMMSDIRRICENPTDE 414 Query: 142 DREWFPDIAGRNWLDTLQYVMRNYKDESFIAQYLSPKLMRDMRMFAVLDDEARSEIEVSA 201 DR+WFP++AG WL + Y MRN+KDESF+AQYLSP L+R+MR+F+VLDD+ R +EVSA Sbjct: 415 DRKWFPELAGSPWLPAMHYAMRNFKDESFVAQYLSPHLIREMRLFSVLDDDMRDALEVSA 474 Query: 202 IHNERGFQYVRQALSRQYDINHREPNIQVWSVNTRGNRSLTLRHFRSDGRSLGDSTNEVL 261 IH++ G+QYVRQALSRQYD++HREPNIQVW+VNTRG+RSLTLRHF SD R L ++EVL Sbjct: 475 IHDDSGYQYVRQALSRQYDMHHREPNIQVWAVNTRGDRSLTLRHFMSDNRHLSSDSDEVL 534 Query: 262 RHMARLWQFDVYLESVDDNGYIVQRYEC 289 +HMARLWQFDVYLESVD+NG + +RYEC Sbjct: 535 KHMARLWQFDVYLESVDENGTVRKRYEC 562