BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5460.p (242 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777718.1| sporulation protein [Herbaspirillum seropedi... 454 e-126 ref|YP_004754793.1| stage V sporulation protein R [Collimonas fu... 400 e-110 ref|ZP_06845848.1| SpoVR family protein [Burkholderia sp. Ch1-1]... 378 e-103 ref|YP_001895878.1| SpoVR family protein [Burkholderia phytofirm... 378 e-103 ref|ZP_03270685.1| SpoVR family protein [Burkholderia sp. H160] ... 378 e-103 >ref|YP_003777718.1| sporulation protein [Herbaspirillum seropedicae SmR1] gb|ADJ65810.1| sporulation protein [Herbaspirillum seropedicae SmR1] Length = 509 Score = 454 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 223/241 (92%), Positives = 232/241 (96%) Query: 1 MNSRFKHDPLPCPSDWSFDLIERYNEEIARVAKGYELDIYPIQLEIISAEQMMDAYASHG 60 MNSRFKHDPLPCPSDWSF+LIERYNEEIARVAKGYELDIYPIQLEIISAEQMMDAYASHG Sbjct: 1 MNSRFKHDPLPCPSDWSFELIERYNEEIARVAKGYELDIYPIQLEIISAEQMMDAYASHG 60 Query: 61 MPVNYRHWSYGKHFMLTERDYKRGQMGLAYEIVINSDPCIAYLMEENTMTMQALVIAHAA 120 MPVNYRHWSYGKHFMLTERDYKRGQMGLAYEIVINSDPCIAYLMEENTMTMQALVIAHAA Sbjct: 61 MPVNYRHWSYGKHFMLTERDYKRGQMGLAYEIVINSDPCIAYLMEENTMTMQALVIAHAA 120 Query: 121 YGHNSFFKGNYLFQLWTDASAIIDYLVYARNYIAECEERHGFERVEELLDSCHALMNYGV 180 YGHNSFFKGNYLFQLWTDASAIIDYLVYARNYIAECEERHGFERVEELLDSCHALMNYGV Sbjct: 121 YGHNSFFKGNYLFQLWTDASAIIDYLVYARNYIAECEERHGFERVEELLDSCHALMNYGV 180 Query: 181 DRYKRPQRLSLAQERAQQREREAYAQSQVNELWRTLPAKKETTAAQVDERSPGTAKKSAV 240 DRYKRPQRLSLAQE+A+QREREAY QSQVNELWRTLPAKKE TAA V+ R P +++ + Sbjct: 181 DRYKRPQRLSLAQEKARQREREAYMQSQVNELWRTLPAKKEMTAAAVEGRFPSEPQENLL 240 Query: 241 F 241 + Sbjct: 241 Y 241 >ref|YP_004754793.1| stage V sporulation protein R [Collimonas fungivorans Ter331] gb|AEK63970.1| Stage V sporulation protein R [Collimonas fungivorans Ter331] Length = 509 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 193/241 (80%), Positives = 216/241 (89%) Query: 1 MNSRFKHDPLPCPSDWSFDLIERYNEEIARVAKGYELDIYPIQLEIISAEQMMDAYASHG 60 MN R H PLPCPSDW+FDLIE YN+EIARVA Y+LDIYPIQLEII+AEQMMDAYAS G Sbjct: 1 MNDRLIHQPLPCPSDWTFDLIELYNDEIARVAANYKLDIYPIQLEIITAEQMMDAYASAG 60 Query: 61 MPVNYRHWSYGKHFMLTERDYKRGQMGLAYEIVINSDPCIAYLMEENTMTMQALVIAHAA 120 MPVNYRHWS+GKHF++TERDYKRGQMGLAYEIVINS+PCIAYLMEENTMTMQALV+AHAA Sbjct: 61 MPVNYRHWSFGKHFLMTERDYKRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVVAHAA 120 Query: 121 YGHNSFFKGNYLFQLWTDASAIIDYLVYARNYIAECEERHGFERVEELLDSCHALMNYGV 180 YGHNSFFKGNYLFQLWTDA AIIDYLVYA+ YIAECEER+GF +VEELLDSCHALM+YGV Sbjct: 121 YGHNSFFKGNYLFQLWTDAHAIIDYLVYAKAYIAECEERYGFSKVEELLDSCHALMHYGV 180 Query: 181 DRYKRPQRLSLAQERAQQREREAYAQSQVNELWRTLPAKKETTAAQVDERSPGTAKKSAV 240 DRYKRPQ+LSL +E+AQ+RER Y QSQVNELWRTLP KK TA QV+ R P +++ + Sbjct: 181 DRYKRPQKLSLEKEQAQRRERAEYMQSQVNELWRTLPEKKAETAEQVEGRFPPETQENLL 240 Query: 241 F 241 + Sbjct: 241 Y 241 >ref|ZP_06845848.1| SpoVR family protein [Burkholderia sp. Ch1-1] gb|EFG66508.1| SpoVR family protein [Burkholderia sp. Ch1-1] Length = 576 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 181/233 (77%), Positives = 207/233 (88%) Query: 9 PLPCPSDWSFDLIERYNEEIARVAKGYELDIYPIQLEIISAEQMMDAYASHGMPVNYRHW 68 PLPCPSDW+F+LIE Y+ IARVA+ YELD+YPIQLE+ISAEQMMDAYAS GMPVNYRHW Sbjct: 77 PLPCPSDWTFELIEEYDSHIARVAEQYELDVYPIQLELISAEQMMDAYASVGMPVNYRHW 136 Query: 69 SYGKHFMLTERDYKRGQMGLAYEIVINSDPCIAYLMEENTMTMQALVIAHAAYGHNSFFK 128 S+GKHF+ TE+ Y+RGQMGLAYEIVINS+PCIAYLMEENTMTMQALVIAHAAYGHNSFFK Sbjct: 137 SFGKHFLSTEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFK 196 Query: 129 GNYLFQLWTDASAIIDYLVYARNYIAECEERHGFERVEELLDSCHALMNYGVDRYKRPQR 188 GNYLF+LWTDA AIIDYLVYA+NYIAECEER G +RVEELLDSCHALMNYGVDRYKRPQ+ Sbjct: 197 GNYLFRLWTDAHAIIDYLVYAKNYIAECEERFGLDRVEELLDSCHALMNYGVDRYKRPQK 256 Query: 189 LSLAQERAQQREREAYAQSQVNELWRTLPAKKETTAAQVDERSPGTAKKSAVF 241 LSL +E A +REREAY QSQVNELWRTLP + +++ER P +++ ++ Sbjct: 257 LSLEKEFAARREREAYLQSQVNELWRTLPTRHTPLPEEIEERYPPEPQENLLY 309 >ref|YP_001895878.1| SpoVR family protein [Burkholderia phytofirmans PsJN] gb|ACD16654.1| SpoVR family protein [Burkholderia phytofirmans PsJN] Length = 576 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 182/233 (78%), Positives = 207/233 (88%) Query: 9 PLPCPSDWSFDLIERYNEEIARVAKGYELDIYPIQLEIISAEQMMDAYASHGMPVNYRHW 68 PLPCPSDW+F+LIE Y+ IARVA+ YELD+YPIQLE+ISAEQMMDAYAS GMPVNYRHW Sbjct: 77 PLPCPSDWTFELIEEYDSHIARVAEQYELDVYPIQLELISAEQMMDAYASVGMPVNYRHW 136 Query: 69 SYGKHFMLTERDYKRGQMGLAYEIVINSDPCIAYLMEENTMTMQALVIAHAAYGHNSFFK 128 S+GKHF+ TE+ Y+RGQMGLAYEIVINS+PCIAYLMEENTMTMQALVIAHAAYGHNSFFK Sbjct: 137 SFGKHFLSTEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFK 196 Query: 129 GNYLFQLWTDASAIIDYLVYARNYIAECEERHGFERVEELLDSCHALMNYGVDRYKRPQR 188 GNYLF+LWTDA AIIDYLVYA+NYIAECEER G +RVEELLDSCHALMNYGVDRYKRPQ+ Sbjct: 197 GNYLFRLWTDAHAIIDYLVYAKNYIAECEERFGLDRVEELLDSCHALMNYGVDRYKRPQK 256 Query: 189 LSLAQERAQQREREAYAQSQVNELWRTLPAKKETTAAQVDERSPGTAKKSAVF 241 LSL +E A +REREAY QSQVNELWRTLP + +V+ER P +++ ++ Sbjct: 257 LSLQKEFAARREREAYLQSQVNELWRTLPTRHTPLPEEVEERYPPEPQENLLY 309 >ref|ZP_03270685.1| SpoVR family protein [Burkholderia sp. H160] gb|EDZ97736.1| SpoVR family protein [Burkholderia sp. H160] Length = 507 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 182/233 (78%), Positives = 208/233 (89%) Query: 9 PLPCPSDWSFDLIERYNEEIARVAKGYELDIYPIQLEIISAEQMMDAYASHGMPVNYRHW 68 PLPCPSDW+F+LIE Y+ IARVA+ YELD+YPIQLE+ISAEQMMDAYAS GMPVNYRHW Sbjct: 8 PLPCPSDWTFELIEEYDSHIARVAEQYELDVYPIQLELISAEQMMDAYASVGMPVNYRHW 67 Query: 69 SYGKHFMLTERDYKRGQMGLAYEIVINSDPCIAYLMEENTMTMQALVIAHAAYGHNSFFK 128 S+GKHF+ TE+ Y+RGQMGLAYEIVINS+PCIAYLMEENTMTMQALVIAHAAYGHNSFFK Sbjct: 68 SFGKHFLATEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFK 127 Query: 129 GNYLFQLWTDASAIIDYLVYARNYIAECEERHGFERVEELLDSCHALMNYGVDRYKRPQR 188 GNYLF+LWTDA AIIDYLVYA+NYIAECEER+G +RVEELLDSCHALMNYGVDRYKRPQ+ Sbjct: 128 GNYLFRLWTDAHAIIDYLVYAKNYIAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQK 187 Query: 189 LSLAQERAQQREREAYAQSQVNELWRTLPAKKETTAAQVDERSPGTAKKSAVF 241 LSL +E A +REREAY QSQVNELWRTLP + +V+ER P +++ ++ Sbjct: 188 LSLQKEFAARREREAYLQSQVNELWRTLPTRHTPLPEEVEERYPPEPQENLLY 240