BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.5459.p         (116 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777717.1| hypothetical protein Hsero_4341 [Herbaspiril...   200   6e-50
ref|YP_004754794.1| hypothetical protein CFU_4149 [Collimonas fu...   159   9e-38
ref|ZP_02379639.1| hypothetical protein BuboB_18037 [Burkholderi...   159   2e-37
gb|EGC98026.1| hypothetical protein B1M_43685 [Burkholderia sp. ...   155   1e-36
ref|YP_001579809.1| hypothetical protein Bmul_1624 [Burkholderia...   155   1e-36

>ref|YP_003777717.1| hypothetical protein Hsero_4341 [Herbaspirillum seropedicae SmR1]
 gb|ADJ65809.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 422

 Score =  200 bits (509), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 96/97 (98%), Positives = 97/97 (100%)

Query: 20  IITKRYSPSEWNIYGAQASDGDNWNDDSPKCRELLESSILPLTRYFAYIQVAEPEQNLWT 79
           IITKRYSPSEWNIYGAQASDGDNWNDDSPKCRELLES+ILPLTRYFAYIQVAEPEQNLWT
Sbjct: 326 IITKRYSPSEWNIYGAQASDGDNWNDDSPKCRELLESAILPLTRYFAYIQVAEPEQNLWT 385

Query: 80  EYMQLIESHPHFAMKKVQSAAEIYPVFRELFEKQVHA 116
           EYMQLIESHPHFAMKKVQSAAEIYPVFRELFEKQVHA
Sbjct: 386 EYMQLIESHPHFAMKKVQSAAEIYPVFRELFEKQVHA 422


>ref|YP_004754794.1| hypothetical protein CFU_4149 [Collimonas fungivorans Ter331]
 gb|AEK63971.1| protein of unknown function DUF444 [Collimonas fungivorans Ter331]
          Length = 421

 Score =  159 bits (403), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 74/99 (74%), Positives = 84/99 (84%)

Query: 18  RAIITKRYSPSEWNIYGAQASDGDNWNDDSPKCRELLESSILPLTRYFAYIQVAEPEQNL 77
           + II +RY P +WNIYGAQASDGDNWNDDSPKCR+LLE  ILP +RYFAYIQV   EQNL
Sbjct: 323 KQIIDERYPPGDWNIYGAQASDGDNWNDDSPKCRQLLELEILPRSRYFAYIQVTVEEQNL 382

Query: 78  WTEYMQLIESHPHFAMKKVQSAAEIYPVFRELFEKQVHA 116
           WTEY Q+   +P FAMKKVQ+A+EIYPVFRELFEKQVH+
Sbjct: 383 WTEYQQIAAVNPQFAMKKVQAASEIYPVFRELFEKQVHS 421


>ref|ZP_02379639.1| hypothetical protein BuboB_18037 [Burkholderia ubonensis Bu]
          Length = 422

 Score =  159 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 74/97 (76%), Positives = 84/97 (86%)

Query: 18  RAIITKRYSPSEWNIYGAQASDGDNWNDDSPKCRELLESSILPLTRYFAYIQVAEPEQNL 77
           R ++ +RYSP+EWNIYGAQASDGDNW DDSPKCR++LE  IL  TRYFAYIQVA  EQNL
Sbjct: 323 RKVMNERYSPTEWNIYGAQASDGDNWTDDSPKCRKILEEDILTKTRYFAYIQVAPEEQNL 382

Query: 78  WTEYMQLIESHPHFAMKKVQSAAEIYPVFRELFEKQV 114
           W EY QL++S PH AMKKV+SAA+IYPVFRELFEKQV
Sbjct: 383 WLEYAQLMQSQPHLAMKKVESAADIYPVFRELFEKQV 419


>gb|EGC98026.1| hypothetical protein B1M_43685 [Burkholderia sp. TJI49]
          Length = 422

 Score =  155 bits (393), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 74/97 (76%), Positives = 82/97 (84%)

Query: 18  RAIITKRYSPSEWNIYGAQASDGDNWNDDSPKCRELLESSILPLTRYFAYIQVAEPEQNL 77
           R ++ +RYSP+EWNIYGAQASDGDNW DDSPKCR++LE  IL  TRYFAYIQVA  EQNL
Sbjct: 323 RKVMNERYSPTEWNIYGAQASDGDNWTDDSPKCRKILEEDILTKTRYFAYIQVAPEEQNL 382

Query: 78  WTEYMQLIESHPHFAMKKVQSAAEIYPVFRELFEKQV 114
           W EY QL  S PH AMKKV+SAA+IYPVFRELFEKQV
Sbjct: 383 WLEYAQLALSQPHLAMKKVESAADIYPVFRELFEKQV 419


>ref|YP_001579809.1| hypothetical protein Bmul_1624 [Burkholderia multivorans ATCC
           17616]
 ref|YP_001946077.1| hypothetical protein BMULJ_01620 [Burkholderia multivorans ATCC
           17616]
 ref|ZP_03570941.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
 ref|ZP_03577564.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 ref|ZP_03585946.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gb|ABX15312.1| protein of unknown function DUF444 [Burkholderia multivorans ATCC
           17616]
 dbj|BAG43541.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
 gb|EED99653.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gb|EEE07834.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gb|EEE14228.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
          Length = 422

 Score =  155 bits (393), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 74/97 (76%), Positives = 82/97 (84%)

Query: 18  RAIITKRYSPSEWNIYGAQASDGDNWNDDSPKCRELLESSILPLTRYFAYIQVAEPEQNL 77
           R ++ +RYSP+EWNIYGAQASDGDNW DDSPKCR++LE  IL  TRYFAYIQVA  EQNL
Sbjct: 323 RKVMNERYSPTEWNIYGAQASDGDNWTDDSPKCRKILEEDILTKTRYFAYIQVAPEEQNL 382

Query: 78  WTEYMQLIESHPHFAMKKVQSAAEIYPVFRELFEKQV 114
           W EY QL  S PH AMKKV+SAA+IYPVFRELFEKQV
Sbjct: 383 WLEYAQLALSQPHLAMKKVESAADIYPVFRELFEKQV 419