BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5455.p (197 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777710.1| oxygen-insensitive nitroreductase [Herbaspir... 366 1e-99 ref|YP_004754921.1| nitroreductase family protein [Collimonas fu... 275 3e-72 ref|YP_234652.1| nitroreductase [Pseudomonas syringae pv. syring... 273 1e-71 gb|EGH74158.1| nitroreductase [Pseudomonas syringae pv. aceris s... 273 1e-71 gb|EGH31508.1| nitroreductase [Pseudomonas syringae pv. japonica... 270 7e-71 >ref|YP_003777710.1| oxygen-insensitive nitroreductase [Herbaspirillum seropedicae SmR1] gb|ADJ65802.1| oxygen-insensitive nitroreductase protein [Herbaspirillum seropedicae SmR1] Length = 197 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 191/197 (96%), Positives = 194/197 (98%) Query: 1 MSANPRNADYPIDPQFLNRWSPRAFNGAEISEETVLTFLEAARWAPSAYNAQPWRFVYAR 60 MSANPRNADYPIDPQFLNRWSPRA+NGAEISEETVLTFLEAARWAPSAYNAQPWRFVYAR Sbjct: 1 MSANPRNADYPIDPQFLNRWSPRAYNGAEISEETVLTFLEAARWAPSAYNAQPWRFVYAR 60 Query: 61 RGTPAWDSLLGLLNEFNRSWCANASALFVVLSRTVMVPPGATEAVPAPTHSFDTGSAWGY 120 RGTPAWDSLLGLLNEFNRSWCANAS L VVLSRTVM+PPGATE VPAPTHSFDTGSAWGY Sbjct: 61 RGTPAWDSLLGLLNEFNRSWCANASVLIVVLSRTVMLPPGATEVVPAPTHSFDTGSAWGY 120 Query: 121 LALQASLSGWHAHGMAGFDKDKARTELNVPAEFSVEAMVVVGKLGDKSILPEGLQAREVP 180 LALQASLSGWHAHGMAGFDKDKARTELNVPAEFSVEAMVV+GKLGDKSILPEGLQAREVP Sbjct: 121 LALQASLSGWHAHGMAGFDKDKARTELNVPAEFSVEAMVVIGKLGDKSILPEGLQAREVP 180 Query: 181 SPREPLSKLAFEGKFKA 197 SPREPLSKLAFEGKFKA Sbjct: 181 SPREPLSKLAFEGKFKA 197 >ref|YP_004754921.1| nitroreductase family protein [Collimonas fungivorans Ter331] gb|AEK64098.1| nitroreductase family protein [Collimonas fungivorans Ter331] Length = 245 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 138/195 (70%), Positives = 160/195 (82%) Query: 3 ANPRNADYPIDPQFLNRWSPRAFNGAEISEETVLTFLEAARWAPSAYNAQPWRFVYARRG 62 + PR AD+P PQFL+RWSPRA+ EISE+ +LT LEAARWAPS+YN+QPWRFV+ARRG Sbjct: 51 STPRVADHPAHPQFLSRWSPRAYANDEISEQELLTILEAARWAPSSYNSQPWRFVFARRG 110 Query: 63 TPAWDSLLGLLNEFNRSWCANASALFVVLSRTVMVPPGATEAVPAPTHSFDTGSAWGYLA 122 TP W LLGLLNEFNRSW NASAL +VLS+T PPG+TE V PTHSFD GSAWGYLA Sbjct: 111 TPHWTKLLGLLNEFNRSWAENASALVIVLSKTTFAPPGSTEEVAMPTHSFDAGSAWGYLA 170 Query: 123 LQASLSGWHAHGMAGFDKDKARTELNVPAEFSVEAMVVVGKLGDKSILPEGLQAREVPSP 182 LQASLSGWHAHGMAGFDK+K RTEL VPA F++EA V +GK+GDK++LPEGL+++E PSP Sbjct: 171 LQASLSGWHAHGMAGFDKEKTRTELGVPANFAIEAAVAIGKIGDKAMLPEGLRSKEEPSP 230 Query: 183 REPLSKLAFEGKFKA 197 R PL L EG FK Sbjct: 231 RLPLQALVSEGTFKG 245 >ref|YP_234652.1| nitroreductase [Pseudomonas syringae pv. syringae B728a] gb|AAY36614.1| Nitroreductase [Pseudomonas syringae pv. syringae B728a] Length = 197 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 136/195 (69%), Positives = 159/195 (81%) Query: 1 MSANPRNADYPIDPQFLNRWSPRAFNGAEISEETVLTFLEAARWAPSAYNAQPWRFVYAR 60 MS NPR AD+PIDPQF RWSPRAFNG I +ET+L+F EAARWAPSAYN+QPWRF+YAR Sbjct: 1 MSTNPRIADHPIDPQFTERWSPRAFNGQSIDQETLLSFFEAARWAPSAYNSQPWRFLYAR 60 Query: 61 RGTPAWDSLLGLLNEFNRSWCANASALFVVLSRTVMVPPGATEAVPAPTHSFDTGSAWGY 120 R TP W+ LGLLNEFNRSW +A+AL +V+S+T V PGA+E PA H+FDTGSAWGY Sbjct: 61 RDTPNWERYLGLLNEFNRSWAQHAAALVIVISKTTFVAPGASEESPALWHTFDTGSAWGY 120 Query: 121 LALQASLSGWHAHGMAGFDKDKARTELNVPAEFSVEAMVVVGKLGDKSILPEGLQAREVP 180 LALQASLSGWH HGMAGFD+D R ELN+P ++V A V +GKLGDKS LP+ LQ REVP Sbjct: 121 LALQASLSGWHTHGMAGFDQDLTRKELNIPEGYAVHAAVAIGKLGDKSTLPDYLQGREVP 180 Query: 181 SPREPLSKLAFEGKF 195 SPR+PL++LA EG F Sbjct: 181 SPRKPLAELAAEGDF 195 >gb|EGH74158.1| nitroreductase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 197 Score = 273 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 135/195 (69%), Positives = 159/195 (81%) Query: 1 MSANPRNADYPIDPQFLNRWSPRAFNGAEISEETVLTFLEAARWAPSAYNAQPWRFVYAR 60 MS NPR AD+PIDPQF RWSPRAFNG I +ET+L+F EAARWAPSAYN+QPWRF+YAR Sbjct: 1 MSTNPRIADHPIDPQFTERWSPRAFNGQSIDQETLLSFFEAARWAPSAYNSQPWRFLYAR 60 Query: 61 RGTPAWDSLLGLLNEFNRSWCANASALFVVLSRTVMVPPGATEAVPAPTHSFDTGSAWGY 120 R TP W+ LGLLNEFNRSW +A+AL +V+S+T V PGA+E PA H+FDTGSAWGY Sbjct: 61 RDTPNWERYLGLLNEFNRSWAQHAAALVIVISKTTFVAPGASEESPALWHTFDTGSAWGY 120 Query: 121 LALQASLSGWHAHGMAGFDKDKARTELNVPAEFSVEAMVVVGKLGDKSILPEGLQAREVP 180 LALQASLSGWH HGMAGFD+D R ELN+P ++V A + +GKLGDKS LP+ LQ REVP Sbjct: 121 LALQASLSGWHTHGMAGFDQDLTRKELNIPEGYAVHAAIAIGKLGDKSTLPDYLQGREVP 180 Query: 181 SPREPLSKLAFEGKF 195 SPR+PL++LA EG F Sbjct: 181 SPRKPLAELAAEGDF 195 >gb|EGH31508.1| nitroreductase [Pseudomonas syringae pv. japonica str. M301072PT] gb|EGH75354.1| nitroreductase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 197 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 134/195 (68%), Positives = 159/195 (81%) Query: 1 MSANPRNADYPIDPQFLNRWSPRAFNGAEISEETVLTFLEAARWAPSAYNAQPWRFVYAR 60 MS NPR AD+PIDPQF RWSPRAF+G I +ET+L+F EAARWAPSAYN+QPWRF+YAR Sbjct: 1 MSTNPRIADHPIDPQFTERWSPRAFSGESIDQETLLSFFEAARWAPSAYNSQPWRFLYAR 60 Query: 61 RGTPAWDSLLGLLNEFNRSWCANASALFVVLSRTVMVPPGATEAVPAPTHSFDTGSAWGY 120 R TP W+ LGLLNEFNRSW +A+AL +V+S+T V PGA+E PA H+FDTGSAWGY Sbjct: 61 RDTPNWERYLGLLNEFNRSWAQHAAALVIVISKTTFVAPGASEESPALWHTFDTGSAWGY 120 Query: 121 LALQASLSGWHAHGMAGFDKDKARTELNVPAEFSVEAMVVVGKLGDKSILPEGLQAREVP 180 LALQASLSGWH HGMAGFD+D R ELN+P ++V A + +GKLGDKS LP+ LQ REVP Sbjct: 121 LALQASLSGWHTHGMAGFDQDLTRKELNIPEGYAVHAAIAIGKLGDKSTLPDYLQGREVP 180 Query: 181 SPREPLSKLAFEGKF 195 SPR+PL++LA EG F Sbjct: 181 SPRKPLAELAAEGDF 195