BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5426.p (266 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777680.1| transcription regulation accessory factor tr... 340 1e-91 ref|YP_001354929.1| transcriptional regulator [Janthinobacterium... 231 9e-59 ref|YP_004754849.1| pantothenate kinase type III, CoaX-like prot... 228 9e-58 ref|YP_001101221.1| accessory factor Bvg [Herminiimonas arsenico... 216 3e-54 ref|ZP_04579831.1| type III pantothenate kinase [Oxalobacter for... 204 9e-51 >ref|YP_003777680.1| transcription regulation accessory factor transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65772.1| transcription regulation accessory factor transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 258 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 189/262 (72%), Positives = 211/262 (80%), Gaps = 9/262 (3%) Query: 1 MRLLVDAGNTRIKWAVVADADRSLAPLPRWQQQGAVERAQVERLARDWGALARQAAPEEE 60 M LL+DAGNTRIKWAV +D + RW+QQGAV R +++ LA+ W AL R Sbjct: 1 MMLLIDAGNTRIKWAVPSDHPQREG---RWRQQGAVARGELQSLAQAWAALDRPQ----- 52 Query: 61 LQICVSNVAGPALRDSLQALLHGVFGPRVIVEWFASTAERAGVRNGYRHPGQLGCDRFAA 120 +ICVSNVAGPALR+SLQ LL VFG ++EWFAST ERAG+RNGYR P +LGCDRFAA Sbjct: 53 -RICVSNVAGPALRESLQQLLQQVFGSGPVIEWFASTLERAGLRNGYRDPARLGCDRFAA 111 Query: 121 AIGARALFPDQELLVATCGTATTIDVVSADGCFEGGMILPGFGTMATSLALNTAQLPRID 180 AIGARAL+PD+ELLVATCGTATTIDVVSA G FEGGMILPGFGTMATSLALNTAQLP+ID Sbjct: 112 AIGARALYPDEELLVATCGTATTIDVVSAQGVFEGGMILPGFGTMATSLALNTAQLPQID 171 Query: 181 GAAPPERLFADNTVEAIVAGCIAAQVGAIEHALAERRRLRPNVPLRCLLAGGAGLLLAPY 240 P +FADNTVEAIV+GCIAAQVGAIEHALA R R P+ RCLLAGGAGL+LAPY Sbjct: 172 EVTPLAGIFADNTVEAIVSGCIAAQVGAIEHALAARERAHPHTARRCLLAGGAGLVLAPY 231 Query: 241 LASGDTPLEKVDNLVLIGLHMA 262 L G+TPLEKVDNLVLIGLH A Sbjct: 232 LVLGETPLEKVDNLVLIGLHTA 253 >ref|YP_001354929.1| transcriptional regulator [Janthinobacterium sp. Marseille] sp|A6T332|COAX_JANMA RecName: Full=Type III pantothenate kinase; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase gb|ABR90085.1| transcriptional regulator [Janthinobacterium sp. Marseille] Length = 260 Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats. Identities = 144/266 (54%), Positives = 180/266 (67%), Gaps = 12/266 (4%) Query: 1 MRLLVDAGNTRIKWAVVADADRSLAPLPRWQQQGAVERAQVERLARDWGALARQAAPEEE 60 M LLVDAGNTRIKWA+V + P +W QQG+V RA+ L W + Sbjct: 1 MLLLVDAGNTRIKWALVDRSAPEQTP-GKWLQQGSVARAEAGTLIEAWRGFSIG------ 53 Query: 61 LQICVSNVAGPALRDSLQ-ALLHGVFGPRVIVEWFASTAERAGVRNGYRHPGQLGCDRFA 119 ++ +SNVAG LR L+ A+LH + V +EWFAS AE GVRN Y +P QLG DRFA Sbjct: 54 -RVMLSNVAGHELRGELERAVLHTLGTRPVALEWFASAAELGGVRNRYLNPTQLGADRFA 112 Query: 120 AAIGARALFPDQELLVATCGTATTIDVVSADGCFEGGMILPGFGTMATSLALNTAQLPRI 179 AAIGA ALFP+ L+VATCGTATT+D +SA G F GGMILPG G MA+SLA NTAQLP++ Sbjct: 113 AAIGAHALFPEGPLVVATCGTATTVDALSAGGEFIGGMILPGLGLMASSLAKNTAQLPQV 172 Query: 180 DGAAPPERLFADNTVEAIVAGCIAAQVGAIEHALAERRRLRPNVPLRCLLAGGAGLLLAP 239 + + FADNT AIV+GC+AAQ GAIE A+A + R PN+P+ C+LAGGA L+AP Sbjct: 173 ALQSTLTQPFADNTDAAIVSGCLAAQAGAIERAVAAQMRTYPNLPIPCILAGGAADLIAP 232 Query: 240 YLASGDTPLEKVDNLVLIGLHMATMR 265 +L+ T +VDNLVLIGLH ++ Sbjct: 233 HLSIDYT---RVDNLVLIGLHTVAIQ 255 >ref|YP_004754849.1| pantothenate kinase type III, CoaX-like protein [Collimonas fungivorans Ter331] gb|AEK64026.1| Pantothenate kinase type III, CoaX-like protein [Collimonas fungivorans Ter331] Length = 257 Score = 228 bits (580), Expect = 9e-58, Method: Composition-based stats. Identities = 140/261 (53%), Positives = 166/261 (63%), Gaps = 13/261 (4%) Query: 3 LLVDAGNTRIKWAVVA-DADRSLAPLPRWQQQGAVERAQVERLARDWGALARQAAPEEEL 61 LL+D GNTRIKWA+ A LA W + G+ ++ L+ W L Sbjct: 4 LLIDVGNTRIKWALTALPVAGELAG--AWLESGSAAHGELVALSERWRKLTVT------- 54 Query: 62 QICVSNVAGPALRDSLQALLHGVFGPRVIVEWFASTAERAGVRNGYRHPGQLGCDRFAAA 121 +I +SNVAG +++ LQ LL VFG V WFAS + AG+RN YR P QLGCDRFAAA Sbjct: 55 RILISNVAGEHIQERLQTLLETVFGIAVRPHWFASLPQLAGLRNAYRDPAQLGCDRFAAA 114 Query: 122 IGARALFPDQELLVATCGTATTIDVVSADGCFEGGMILPGFGTMATSLALNTAQLPRIDG 181 +GA+ LFP Q LLVATCGTATTID VSADG F GGMILPG G MATSLA +TAQLP I Sbjct: 115 LGAQRLFPQQTLLVATCGTATTIDAVSADGVFSGGMILPGLGLMATSLARSTAQLPHITD 174 Query: 182 AAPPERLFADNTVEAIVAGCIAAQVGAIEHALAERRRLRPNVPLRCLLAGGAGLLLAPYL 241 LFADNT +AI++GCI AQVGAIE A R P + C++AGG+ L+APYL Sbjct: 175 HVQVNTLFADNTDDAIISGCINAQVGAIERAFGLLGRQAPGAHVLCVVAGGSAALIAPYL 234 Query: 242 ASGDTPLEKVDNLVLIGLHMA 262 + E VDNLVLIGL A Sbjct: 235 SIAH---ETVDNLVLIGLQTA 252 >ref|YP_001101221.1| accessory factor Bvg [Herminiimonas arsenicoxydans] sp|A4G9B3|COAX_HERAR RecName: Full=Type III pantothenate kinase; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase emb|CAL63100.1| Putative type III pantothenate kinase (Pantothenic acid kinase) (PanK-III) CoaX-like [Herminiimonas arsenicoxydans] Length = 258 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 135/265 (50%), Positives = 170/265 (64%), Gaps = 14/265 (5%) Query: 1 MRLLVDAGNTRIKWAVVADADRSLAPLPRWQQQGAVERAQVERLARDWGALARQAAPEEE 60 M LLVDAGNTRIKW +V + P W G+ RA+ +LA+ W + + Sbjct: 1 MLLLVDAGNTRIKWVLVDCSSGQQTP-GSWHVAGSAARAETAQLAQAWSSFSIS------ 53 Query: 61 LQICVSNVAGPALRDSLQ-ALLHGVFGPRVIVEWFASTAERAGVRNGYRHPGQLGCDRFA 119 ++ +SNVAG LR+ L+ A+LH + +EWFAST GVRN Y +P QLG DRFA Sbjct: 54 -RVLLSNVAGAELREELERAVLHA--AGDIELEWFASTPAAGGVRNHYLNPAQLGSDRFA 110 Query: 120 AAIGARALFPDQELLVATCGTATTIDVVSADGCFEGGMILPGFGTMATSLALNTAQLPRI 179 AAIGA LFP++ L+VATCGTATTID V+ADG F GGMILPG MA++LA NTAQLP + Sbjct: 111 AAIGAHVLFPNRPLVVATCGTATTIDAVNADGAFVGGMILPGLALMASALANNTAQLPEV 170 Query: 180 DGAAPPERLFADNTVEAIVAGCIAAQVGAIEHALAERRRLRPNVPLRCLLAGGAGLLLAP 239 A + FADNT AIV+GC+AAQ GAIE A+ P L C+LAGGA L+AP Sbjct: 171 ALHASSTQPFADNTDAAIVSGCLAAQAGAIERAVKAHAAAHPQGELYCILAGGAADLIAP 230 Query: 240 YLASGDTPLEKVDNLVLIGLHMATM 264 +L+ ++VDNLVLIGLH + Sbjct: 231 HLS---IAYKRVDNLVLIGLHTVAI 252 >ref|ZP_04579831.1| type III pantothenate kinase [Oxalobacter formigenes OXCC13] gb|EEO30804.1| type III pantothenate kinase [Oxalobacter formigenes OXCC13] Length = 256 Score = 204 bits (520), Expect = 9e-51, Method: Composition-based stats. Identities = 120/263 (45%), Positives = 160/263 (60%), Gaps = 8/263 (3%) Query: 3 LLVDAGNTRIKWAVVADADRSLAPLPRWQQQGAVERAQVERLARDWGALARQAAPEEELQ 62 LLVDAGNT IKWA+ A W++ GAV ++ L W AL R++ E + Sbjct: 2 LLVDAGNTFIKWAMTHPDQSFSAESISWKEFGAVRHHELSSLKDTWQALHRESPFE---R 58 Query: 63 ICVSNVAGPALRDSLQALLHGVFGPRVIVEWFASTAERAGVRNGYRHPGQLGCDRFAAAI 122 + +SNVAG L ++L L + ++WF S AG++N Y +LG DRFA+ + Sbjct: 59 VIISNVAGQNLGNTLFDFLKTLEPRPQKIDWFYSAPSLAGIKNTYLDFRKLGSDRFASMV 118 Query: 123 GARALFPDQELLVATCGTATTIDVVSADGCFEGGMILPGFGTMATSLALNTAQLPRIDGA 182 GARAL PDQ L+V T GTATTID +S DG F GGMILPG MA SLA NTAQLP + Sbjct: 119 GARALHPDQPLIVVTAGTATTIDAISPDGTFMGGMILPGLKLMAESLAQNTAQLPEVAQH 178 Query: 183 APPERLFADNTVEAIVAGCIAAQVGAIEHALAERRRLRPNVPLRCLLAGGAGLLLAPYLA 242 FA+ T +AI++GCI AQ GAIE A+ + ++ NV +CLL+GGA +AP L+ Sbjct: 179 NSKISHFANETGKAILSGCINAQAGAIERAVTDHQKQYDNV--QCLLSGGAARYIAPNLS 236 Query: 243 SGDTPLEKVDNLVLIGLHMATMR 265 P +DNLVLIGLH ++++ Sbjct: 237 ---LPHRIIDNLVLIGLHRSSIQ 256