BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5425.p (267 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777679.1| signal peptide protein [Herbaspirillum serop... 350 1e-94 ref|YP_001101220.1| hypothetical protein HEAR2989 [Herminiimonas... 165 7e-39 ref|YP_004754848.1| hypothetical protein CFU_4203 [Collimonas fu... 150 2e-34 ref|YP_001354928.1| hypothetical protein mma_3238 [Janthinobacte... 134 1e-29 ref|YP_003523083.1| sporulation domain protein [Sideroxydans lit... 99 8e-19 >ref|YP_003777679.1| signal peptide protein [Herbaspirillum seropedicae SmR1] gb|ADJ65771.1| signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 259 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 204/256 (79%), Positives = 218/256 (85%), Gaps = 8/256 (3%) Query: 12 VGNVVLFGMSRGYFGASATERREPQRLAQQLHPELLSVLPANSEKLASQLRAQPSTAQVA 71 VGNV+LFG+ RGYFGA+ATERREPQRLA+QLHPELLSVLPANSEKLASQ R+Q A + Sbjct: 12 VGNVILFGLPRGYFGANATERREPQRLAEQLHPELLSVLPANSEKLASQTRSQAPAAAPS 71 Query: 72 SADATATAPAAAATLTPATSTTSTTATQPAPTAAXQTVAVTPSCTEVGNFTAADARRFSE 131 ++ A AA A T A Q A AVTPSCTEVGNFT ADA+RFSE Sbjct: 72 ASAAAPAGADPAAAANAAAPATQPPAAQVA--------AVTPSCTEVGNFTVADAKRFSE 123 Query: 132 QLASLKLGDKVVQKLTQDVTSHMVYIPPQDGREGADRRIAELRRLGIGDFYVIPDSFPNP 191 QLASL LGD+V QKLTQDVTSHMVYIPPQDGREGA+RRIAELRRLGIGDFYV+PDSFPNP Sbjct: 124 QLASLNLGDRVAQKLTQDVTSHMVYIPPQDGREGAERRIAELRRLGIGDFYVLPDSFPNP 183 Query: 192 ALRSGVSLGIFRTEEAAKAYVGQLISRGVRSARIIARRSGAGKQVFQLRDLSPEARTALE 251 ALRSG+SLGIFRTEEAAKAYVGQLISRGVRSARIIARRSGAGKQVFQLRDLSPEARTAL+ Sbjct: 184 ALRSGISLGIFRTEEAAKAYVGQLISRGVRSARIIARRSGAGKQVFQLRDLSPEARTALD 243 Query: 252 NIKSAFPDQEIRACSA 267 NIKSAFPDQEIRACSA Sbjct: 244 NIKSAFPDQEIRACSA 259 >ref|YP_001101220.1| hypothetical protein HEAR2989 [Herminiimonas arsenicoxydans] emb|CAL63099.1| Conserved hypothetical protein; putative exported protein [Herminiimonas arsenicoxydans] Length = 251 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 107/266 (40%), Positives = 155/266 (58%), Gaps = 21/266 (7%) Query: 3 LKLLFWLLLVGNVVLFGMSRGYFGASATERREPQRLAQQLHPELLSVLPANSEKLASQLR 62 LK+LF LL+ N L+ +G+ A + REP RLAQQL+P L ++PA + + A+ Sbjct: 2 LKILFGFLLLINGGLYAFQQGWLDAWSPASREPSRLAQQLNPAQLKLIPAPAARPAAVAP 61 Query: 63 AQPSTAQV-ASADATATAPAAAATLTPATSTTSTTATQPAPTAAXQTVAVTPSCTEVGNF 121 + + + V A A AT P A + A ++ A CTEVGNF Sbjct: 62 SAVAPSAVNALAAATPEEPEAEKNMARADKISNVLA-----------------CTEVGNF 104 Query: 122 TAADARRFSEQLASLKLGDKVVQKLTQDVTSHMVYIPPQDGREGADRRIAELRRLGIGDF 181 A +A+RF QLASL LG+++ ++ Q+ HMVYIPPQ ++ A+++ EL+RLG+ DF Sbjct: 105 DAVEAKRFETQLASLALGERLTRRTIQEHARHMVYIPPQASKDAAEKKAGELKRLGVEDF 164 Query: 182 YVIPDSFPNPALRSGVSLGIFRTEEAAKAYVGQLISRGVRSARIIARRSGAGKQVFQLRD 241 +VI D AL+ G+SLGIF++EEAA+ ++ L +GVRSARI A K FQLR Sbjct: 165 FVIQDG---SALQWGISLGIFKSEEAARNHLNALNQKGVRSARIGTHSPSANKVAFQLRG 221 Query: 242 LSPEARTALENIKSAFPDQEIRACSA 267 L A+ ++ IK +FP QE+R C+ Sbjct: 222 LDTAAKNSVVKIKGSFPRQELRECAG 247 >ref|YP_004754848.1| hypothetical protein CFU_4203 [Collimonas fungivorans Ter331] gb|AEK64025.1| hypothetical protein CFU_4203 [Collimonas fungivorans Ter331] Length = 229 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 111/263 (42%), Positives = 147/263 (55%), Gaps = 36/263 (13%) Query: 3 LKLLFWLLLVGNVVLFGMSRGYFGASATERREPQRLAQQLHPELLSVLPANSEKLASQLR 62 LK++FWLLL+ N LF M +GY GA ++ REP R+ +QL P+ Sbjct: 2 LKIIFWLLLLANAALFAMQKGYLGALYSDGREPARIGRQLQPD----------------- 44 Query: 63 AQPSTAQVASADATATAPAAAATLTPATSTTSTTATQPAPTAAXQTVAVTPSCTEVGNFT 122 ++ A AAA +L A + TA AP A CTEVGNF+ Sbjct: 45 ------KIRMTAAENPPAAAATSLASAALAPAATAADLAPVA----------CTEVGNFS 88 Query: 123 AADARRFSEQLASLKLGDKVVQKLTQDVTSHMVYIPPQDGREGADRRIAELRRLGIGDFY 182 AA+ARRFS QLA K V++ TQ+V SHMVY+P +E AD + E+RRLGI DF+ Sbjct: 89 AAEARRFSSQLAERMPAIKFVRRETQEVASHMVYLPSLGSKEAADAKADEVRRLGISDFF 148 Query: 183 VIPDSFPNPALRSGVSLGIFRTEEAAKAYVGQLISRGVRSARIIARRSGAGKQVFQLRDL 242 VI D+ P LR G+SLGIF+T+EAA+ V L RG+ A++ R + K FQLRDL Sbjct: 149 VIQDASP---LRYGISLGIFKTDEAAQKQVASLAKRGLSGAKVGTRSVSSSKVAFQLRDL 205 Query: 243 SPEARTALENIKSAFPDQEIRAC 265 + R A + IK FP QE+R+C Sbjct: 206 GGDNRLAFDKIKLDFPAQEVRSC 228 >ref|YP_001354928.1| hypothetical protein mma_3238 [Janthinobacterium sp. Marseille] gb|ABR90903.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 237 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 86/249 (34%), Positives = 130/249 (52%), Gaps = 32/249 (12%) Query: 18 FGMSRGYFGASATERREPQRLAQQLHPELLSVLPANSEKLASQLRAQPSTAQVASADATA 77 + GY A +P RL QQL+P+ L +LP E A++ A V Sbjct: 17 YAFQHGYLDALIPPSHDPLRLKQQLNPDQLKLLPLPVENGAAE--KVEKVAVVEPEKIPQ 74 Query: 78 TAPAAAATLTPATSTTSTTATQPAPTAAXQTVAVTPSCTEVGNFTAADARRFSEQLASLK 137 T AA L +CTE+GNF AA+A+ F +LA+L Sbjct: 75 TTEKAADVL---------------------------ACTEIGNFDAAEAKNFEAKLAALA 107 Query: 138 LGDKVVQKLTQDVTSHMVYIPPQDGREGADRRIAELRRLGIGDFYVIPDSFPNPALRSGV 197 LG++++++ Q+ +VYIPP +E AD++ EL+RLG+ DF+VI + P L+ G+ Sbjct: 108 LGERLIRRPVQENARFIVYIPPLANKEAADKKGGELKRLGVDDFFVISEHTP---LQWGI 164 Query: 198 SLGIFRTEEAAKAYVGQLISRGVRSARIIARRSGAGKQVFQLRDLSPEARTALENIKSAF 257 SLGIF++EEAA+ ++ L +GVRSAR+ K +Q+R + + L+ I++ F Sbjct: 165 SLGIFKSEEAARNHLAALNQKGVRSARVGPHNVAPAKFAYQVRRIDAPTKANLDKIRATF 224 Query: 258 PDQEIRACS 266 P QE RACS Sbjct: 225 PRQEERACS 233 >ref|YP_003523083.1| sporulation domain protein [Sideroxydans lithotrophicus ES-1] gb|ADE10696.1| Sporulation domain protein [Sideroxydans lithotrophicus ES-1] Length = 263 Score = 98.6 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 87/273 (31%), Positives = 139/273 (50%), Gaps = 23/273 (8%) Query: 4 KLLFWLLLVGNVVLFGMSRGYFGASATERREPQRLAQQLHPE---LLSVLPANSEKLASQ 60 K + WLLL+ N+ LFG R +G+ T + +LHPE +L LPA++ Sbjct: 3 KWIVWLLLLANLALFGWMR--WGSLLTVDTDAGSTQPELHPEKIRVLDALPASA------ 54 Query: 61 LRAQPSTAQVASADATATAPAAAATLTPATSTTSTTATQPAPTAAXQTVAVTP-----SC 115 A P++ ++ A + +A AA A PA + T PA VA TP C Sbjct: 55 --AAPTSGGMSLALSPVSAAAATAVAEPAPAPVPTHMPAPASIPIHVPVAGTPPDNVSKC 112 Query: 116 TEVGNFTAADARRFSEQLASLKLGDKVVQKLTQDVTSHMVYIPPQDGREGADRRIAELRR 175 E G F+ D R + L+ +KLGD + Q+ + VYIPP R +++IA+L+ Sbjct: 113 AEWGEFSGEDLLRAQQALSLMKLGDNLSQRTVERNHGFWVYIPPMKKRSSVEKKIAQLKE 172 Query: 176 LGIGDFYVIPDSFPNPALRSGVSLGIFRTEEAAKAYVGQLISRGVRSARIIARRSGAGKQ 235 GI D++VI + ++ +SLG+F+T++AA+ ++ L ++ VR+AR+ R S Sbjct: 173 RGIKDYFVIQE---KGKWQNAISLGVFKTKDAAEKFIAVLRTKDVRTARLGERVSKLKYT 229 Query: 236 VFQLRDLSPEARTALENIKSAFPDQEIR--ACS 266 VF + DL L ++ FPD E++ AC+ Sbjct: 230 VFVVNDLDSGTADKLSALQKEFPDSELKLSACN 262