BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5420.p (192 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777675.1| Fe2+/Zn2+ uptake transcription regulator pro... 218 3e-55 ref|YP_004754684.1| Zinc uptake regulation protein ZUR [Collimon... 194 7e-48 ref|YP_001354894.1| ferric uptake regulator family protein [Jant... 187 8e-46 ref|YP_001101191.1| transcription regulator [Herminiimonas arsen... 178 4e-43 ref|YP_582283.1| putative ferric uptake regulator, Fur family [C... 97 1e-18 >ref|YP_003777675.1| Fe2+/Zn2+ uptake transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65767.1| Fe2+/Zn2+ uptake transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 168 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 129/172 (75%), Positives = 140/172 (81%), Gaps = 6/172 (3%) Query: 21 ALAELQLRDASVRVTQARVSVLAALLSARSAASHQDIQDYLADMDRVTLYRALDCLTEAG 80 ALAE QLR+A VRVTQARV+VL ALL RSAASHQDIQD ADMDRVTLYRALDCLTEAG Sbjct: 3 ALAEAQLREAGVRVTQARVNVLGALLETRSAASHQDIQDRFADMDRVTLYRALDCLTEAG 62 Query: 81 LAHKISSDDRIFRYSAGTGAEHHDHGSHGGHQHTHGHAQHQHRHFKCTRCARVFCLDGSG 140 LAHKISSDDRIFRYSAG DH HG H H+HG QHQH HFKCTRC RVFCLD S Sbjct: 63 LAHKISSDDRIFRYSAGA-----DHAEHGLHDHSHGK-QHQHGHFKCTRCNRVFCLDASD 116 Query: 141 EAGFLESVLPSSGKRQTTAAQLQTALQKSLGKGFRSHEVELTIKGWCADCAD 192 FL +VLP + +TAAQLQ+AL+++LGKGF+SHEVELTIKGWCADCAD Sbjct: 117 GTDFLATVLPPAEGHHSTAAQLQSALRRTLGKGFQSHEVELTIKGWCADCAD 168 >ref|YP_004754684.1| Zinc uptake regulation protein ZUR [Collimonas fungivorans Ter331] gb|AEK63861.1| Zinc uptake regulation protein ZUR [Collimonas fungivorans Ter331] Length = 201 Score = 194 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 123/198 (62%), Positives = 143/198 (72%), Gaps = 11/198 (5%) Query: 2 KSKADITANALPHDPAAAQALAELQLRDASVRVTQARVSVLAALLSARSAASHQDIQDYL 61 KSK+ T A P A ALAE QLR+ ++R+T AR+ VLAALL AR A SHQD+QD Sbjct: 6 KSKSVATMAASSSRPHTA-ALAEAQLREVALRITPARIKVLAALLEARCAFSHQDMQDQF 64 Query: 62 ADMDRVTLYRALDCLTEAGLAHKISSDDRIFRYSAGTGAEHHDHGSHGGHQ-HTHGHAQH 120 +MDRVTLYRALDCLT+AGLAHKI+ DDR+FRYSAGT EH + GH H QH Sbjct: 65 TEMDRVTLYRALDCLTDAGLAHKIAGDDRVFRYSAGT--EHSESSHAAGHSGHATHQTQH 122 Query: 121 QHRHFKCTRCARVFCLDGSGEAGFLESVLP---SSGKRQTTAA----QLQTALQKSLGKG 173 QH HFKCTRCA++FCLDGSG+AGFL+S+L S TT A QLQ ALQ +LGKG Sbjct: 123 QHGHFKCTRCAKIFCLDGSGDAGFLDSMLALGDSHAGSSTTPAKLRKQLQQALQDTLGKG 182 Query: 174 FRSHEVELTIKGWCADCA 191 F+ HE+ELTIKGWCADCA Sbjct: 183 FQGHEIELTIKGWCADCA 200 >ref|YP_001354894.1| ferric uptake regulator family protein [Janthinobacterium sp. Marseille] gb|ABR89399.1| ferric uptake regulator family protein [Janthinobacterium sp. Marseille] Length = 174 Score = 187 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 109/174 (62%), Positives = 127/174 (72%), Gaps = 16/174 (9%) Query: 21 ALAELQLRDASVRVTQARVSVLAALLSARSAASHQDIQDYLADMDRVTLYRALDCLTEAG 80 ALAE QLR+ SVR T AR+ VLAALL A A SHQD+QD L +MDRVTLYRALDCLT+AG Sbjct: 11 ALAESQLRETSVRATDARIKVLAALLGAPYALSHQDVQDKLVEMDRVTLYRALDCLTDAG 70 Query: 81 LAHKISSDDRIFRYSAGTGAEHHDHGSHGGHQHTHGHAQHQHRHFKCTRCARVFCLDGSG 140 LAHKI+ DDR+FRY+A GAE+++HG H Q QHQH HFKCTRCA+VFC+D Sbjct: 71 LAHKIAGDDRVFRYNA--GAENNEHGMHSTAQ------QHQHGHFKCTRCAKVFCIDNVD 122 Query: 141 EAGFLESVLPSSGKRQTTAA---QLQTALQKSLGKGFRSHEVELTIKGWCADCA 191 E F + K+ TA QLQ LQ +LGKGF+SHE+ELTIKGWCADCA Sbjct: 123 EQLF-----AADNKKSPTATLRQQLQNVLQATLGKGFQSHEIELTIKGWCADCA 171 >ref|YP_001101191.1| transcription regulator [Herminiimonas arsenicoxydans] emb|CAL63070.1| putative ferric-uptake regulator [Herminiimonas arsenicoxydans] Length = 199 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 109/174 (62%), Positives = 125/174 (71%), Gaps = 11/174 (6%) Query: 21 ALAELQLRDASVRVTQARVSVLAALLSARSAASHQDIQDYLADMDRVTLYRALDCLTEAG 80 ALAE QLRD S+R T AR+ VLAALL A A SHQD+QD L DMDRVTLYRALD LT+AG Sbjct: 33 ALAESQLRDTSLRSTAARIKVLAALLGAPYALSHQDVQDTLVDMDRVTLYRALDALTDAG 92 Query: 81 LAHKISSDDRIFRYSAGTGAEHHDHGSHGGHQHTHGHAQHQHRHFKCTRCARVFCLDGSG 140 LAHKI+ DDR+FRY+A GAEH GS ++ H QHQH HFKCTRCA+VFC+D Sbjct: 93 LAHKIAGDDRVFRYNA--GAEHLAAGS----KNQILHQQHQHGHFKCTRCAKVFCIDNID 146 Query: 141 E---AGFLESVLPSSGKRQTTAAQLQTALQKSLGKGFRSHEVELTIKGWCADCA 191 E A ++ L S T QLQ LQ +LGKGF+SHE+ELTIKGWCADCA Sbjct: 147 EKLLAADTQTQLNPSA--VTLRQQLQKVLQATLGKGFQSHEIELTIKGWCADCA 198 >ref|YP_582283.1| putative ferric uptake regulator, Fur family [Cupriavidus metallidurans CH34] gb|ABF07014.1| putative ferric uptake regulator, Fur-family [Cupriavidus metallidurans CH34] Length = 169 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 67/183 (36%), Positives = 91/183 (49%), Gaps = 41/183 (22%) Query: 12 LPHDPAAAQALAELQLRDASVRVTQARVSVLAALLSARSAASHQDIQDYL---ADMDRVT 68 +P DP A A+L+LR RVTQ R+++LA L+ A +HQ + D+L D+DRVT Sbjct: 16 MPGDPLAT---AQLRLRQLGARVTQPRLAILACLIEAPEPLTHQAVIDHLPAEGDVDRVT 72 Query: 69 LYRALDCLTEAGLAHKISSDDRIFRYSAGTGAEHHDHGSHGGHQHTHGHAQHQHRHFKCT 128 +YR LD L + GLA K + +DR+FR+S H+ QH HF CT Sbjct: 73 VYRVLDWLVDQGLAQKRAGNDRVFRFSLVE------------HEAARAEVHRQHSHFHCT 120 Query: 129 RCARVFCLDGSGEAGFLESVLPSSGKRQTTAAQLQTALQKSLGKGFRSHEVELTIKGWCA 188 RC R FCL+ +G +SV P + GF VELT+ G CA Sbjct: 121 RCDRTFCLESAG-----KSVAP------------------RVPNGFAVEHVELTVNGICA 157 Query: 189 DCA 191 +C Sbjct: 158 ECG 160