BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5414.p (538 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777671.1| hypothetical protein Hsero_4294 [Herbaspiril... 659 0.0 ref|YP_004754679.1| Sel1-like repeat protein [Collimonas fungivo... 512 e-143 ref|ZP_08273872.1| hypothetical protein IMCC9480_2154 [Oxalobact... 424 e-116 ref|YP_003773620.1| TPR repeat, SEL1 subfamily protein [Herbaspi... 417 e-114 ref|ZP_04577601.1| conserved hypothetical protein [Oxalobacter f... 406 e-111 >ref|YP_003777671.1| hypothetical protein Hsero_4294 [Herbaspirillum seropedicae SmR1] gb|ADJ65763.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 532 Score = 659 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 425/525 (80%), Positives = 451/525 (85%), Gaps = 7/525 (1%) Query: 1 MANREDLAIIRAARAGDAQAQLNLGQRYLFGGNGLPQSPGTAWHWLERAARQGLADAWML 60 MANREDLAIIRAARAG A AQL LG+RYLFGGNGLPQS TA+HWLERAARQ LADAWML Sbjct: 1 MANREDLAIIRAARAGQAAAQLTLGKRYLFGGNGLPQSLSTAFHWLERAARQELADAWML 60 Query: 61 IARHIPYEVVSQLGKPHEAAQWYERAFEAGATRAGLTLARLVLEHPAGVAAASPEQKNRA 120 IA HIPYEVV L +P EAAQWYERAFE G T+AGL ARLVLE A E K RA Sbjct: 61 IAEHIPYEVVVTLTRPQEAAQWYERAFEGGMTKAGLAFARLVLESAGEPGA---ELKARA 117 Query: 121 LRALETVAAEGDPDAQWLLARQGERMLVPTAVSSEAAADVAPAAAATVRPEQLQQWTQKA 180 +R L+ VA EGDPDAQWLLARQG + A + +AA APA A + PE LQQWTQKA Sbjct: 118 IRVLQVVAREGDPDAQWLLARQGSQ----PAEPAASAAVAAPAPAPDLPPEDLQQWTQKA 173 Query: 181 ADAGIEQAQHALADSAWQQSDFAAFRQRAQPLADALLRQHEQQVAQLNAPSEALAAALGA 240 ADAGIEQAQHALAD+AWQQ+D FRQRAQPLAD LLRQ+E VAQLN P+EALA ALG Sbjct: 174 ADAGIEQAQHALADAAWQQADLIQFRQRAQPLADKLLRQYEALVAQLNGPAEALATALGP 233 Query: 241 QNIQLLRRLAEVHQSDKRPDLLQAQQLLELAALACDRDAQLALGLLYGRVDASGERRFAG 300 QNI LLRRLA+VH +KR DL QAQQLLELAALACDRDAQLALGLLYGRVD G R F G Sbjct: 234 QNIVLLRRLAQVHLGEKRADLQQAQQLLELAALACDRDAQLALGLLYGRVDEQGVRCFPG 293 Query: 301 QGSANYKKAIRWLTLAGEQGMAAAWFVLSRIYLKPEFSQRNLADVQHYLERAAEMGHVGA 360 GSANYKKAIRWLTLAGEQGMAAAW+VLSRIYLKPEFSQRNLADVQHYLERAAEMGHV A Sbjct: 294 LGSANYKKAIRWLTLAGEQGMAAAWYVLSRIYLKPEFSQRNLADVQHYLERAAEMGHVAA 353 Query: 361 QVECGVGAWRNRRDDPANDVRALYWLQKAASQGAQQAQALLDKVADRPQSAAWAVQARAQ 420 Q+ECG+GAWRNRRD+ NDVRALYWLQKAASQG +QAQALLDKVADRPQ+AAWAV ARAQ Sbjct: 354 QLECGIGAWRNRRDEAGNDVRALYWLQKAASQGDEQAQALLDKVADRPQAAAWAVLARAQ 413 Query: 421 MSREQVNAHPFLAARIELAMLFGLTRPEALLIDLKQADCGHCLMIDIRSQYARSKRRLIM 480 ++REQVNAHPFLAARIELA LFGLTRPEALLIDLKQAD GHCLM+DIRSQYARSKRRLIM Sbjct: 414 LTREQVNAHPFLAARIELATLFGLTRPEALLIDLKQADRGHCLMVDIRSQYARSKRRLIM 473 Query: 481 VETGEQRGTLNRIGRLFEDMDCGPSGPEGNYRQRLYRLKTVLPQS 525 VE GEQRG LNRIGRLFED+DCGPSGPEGNYRQRLYRLKTVLPQS Sbjct: 474 VENGEQRGALNRIGRLFEDVDCGPSGPEGNYRQRLYRLKTVLPQS 518 >ref|YP_004754679.1| Sel1-like repeat protein [Collimonas fungivorans Ter331] gb|AAT42413.1| hypothetical protein [Collimonas fungivorans Ter331] gb|AEK63856.1| Sel1-like repeat protein [Collimonas fungivorans Ter331] Length = 536 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 320/531 (60%), Positives = 385/531 (72%), Gaps = 3/531 (0%) Query: 1 MANREDLAIIRAARAGDAQAQLNLGQRYLFGGNGLPQSPGTAWHWLERAARQGLADAWML 60 MA REDLAIIRAARAG A AQL LG+RYLFGGNGLPQS TA HWL+RAA+Q ++AWML Sbjct: 1 MAKREDLAIIRAARAGQAAAQLALGKRYLFGGNGLPQSLSTALHWLDRAAQQQESEAWML 60 Query: 61 IARHIPYEVVSQLGKPHEAAQWYERAFEAGATRAGLTLARLVLEHPAGVAAASPEQKNRA 120 I HIP EV P WYERAF+AG +AGL LA+LVL G P + Sbjct: 61 IGSHIPLEVAEAASDPLALCVWYERAFDAGLMQAGLVLAQLVLNREGGNPQVLPGLHGKV 120 Query: 121 LRALETVAAEGDPDAQWLLARQGERMLVP-TAVSSEAAADVAPAAAATVRPEQ--LQQWT 177 ++ALET A G +AQWLLA+ + +P A SE A V +PEQ +WT Sbjct: 121 IKALETAAHAGIAEAQWLLAQHADSAPLPGRAAPSEKLAGVQSETQPESKPEQDATLKWT 180 Query: 178 QKAADAGIEQAQHALADSAWQQSDFAAFRQRAQPLADALLRQHEQQVAQLNAPSEALAAA 237 +AADAG+ QAQ +LA AW+++D+ F +RA PLA AL Q+ +AQLN PSE LA Sbjct: 181 ARAADAGVMQAQQSLAQLAWEKADWPVFLERALPLARALSEQYADILAQLNVPSETLARQ 240 Query: 238 LGAQNIQLLRRLAEVHQSDKRPDLLQAQQLLELAALACDRDAQLALGLLYGRVDASGERR 297 LG +N+ LL R A+V Q+ D + QQ LELAA D+ AQLALGL Y R+++ GER Sbjct: 241 LGEENLSLLLRSAQVLQTSDGFDAAEVQQFLELAAYGDDKAAQLALGLWYARMNSDGERL 300 Query: 298 FAGQGSANYKKAIRWLTLAGEQGMAAAWFVLSRIYLKPEFSQRNLADVQHYLERAAEMGH 357 G GSANYKKAIRWLTLAGE G+A AW+ LSRIYLK EFSQRNL D+Q +LE AAEMGH Sbjct: 301 LVGTGSANYKKAIRWLTLAGEAGLADAWYALSRIYLKSEFSQRNLVDMQRHLEHAAEMGH 360 Query: 358 VGAQVECGVGAWRNRRDDPANDVRALYWLQKAASQGAQQAQALLDKVADRPQSAAWAVQA 417 AQ+ECG+ AWRNRR+ ANDVRA+YWLQKAA+QG+ +A LL ++AD Q AAWA A Sbjct: 361 RAAQLECGLSAWRNRREKLANDVRAVYWLQKAAAQGSGEAANLLARIADSAQPAAWAEAA 420 Query: 418 RAQMSREQVNAHPFLAARIELAMLFGLTRPEALLIDLKQADCGHCLMIDIRSQYARSKRR 477 + Q++REQV AHPFLAARIELA+LFGL+RPEALL+DL QADCGHCL+IDIR+ YARSKRR Sbjct: 421 KQQLTREQVKAHPFLAARIELAVLFGLSRPEALLLDLNQADCGHCLVIDIRAHYARSKRR 480 Query: 478 LIMVETGEQRGTLNRIGRLFEDMDCGPSGPEGNYRQRLYRLKTVLPQSQEE 528 LI+++TG++R L RI RLFED+DCGP+GPEGNYRQRLYR KT +P S E Sbjct: 481 LILIQTGDERQALTRIARLFEDVDCGPNGPEGNYRQRLYRFKTAVPSSAAE 531 >ref|ZP_08273872.1| hypothetical protein IMCC9480_2154 [Oxalobacteraceae bacterium IMCC9480] gb|EGF32676.1| hypothetical protein IMCC9480_2154 [Oxalobacteraceae bacterium IMCC9480] Length = 522 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 260/532 (48%), Positives = 342/532 (64%), Gaps = 18/532 (3%) Query: 1 MANREDLAIIRAARAGDAQAQLNLGQRYLFGGNGLPQSPGTAWHWLERAARQGLADAWML 60 MANRE+L +IRAARAG A AQL LG+RYLFGG GLP+S TA +WL+RAA Q +AW+L Sbjct: 1 MANREELLVIRAARAGQAPAQLALGKRYLFGGAGLPKSIATALYWLDRAAHQQQDEAWLL 60 Query: 61 IARHIPYEVVSQLGKPHEAAQWYERAFEAGATRAGLTLARLVLEHPAGVAAASPEQKNRA 120 I HIP+E S+ +P WYERAF++G +AGL LA+LVL S + +A Sbjct: 61 IGSHIPFEAASRSAQPASLCVWYERAFDSGVLQAGLVLAKLVLAQSGD--CTSDILRRKA 118 Query: 121 LRALETVAAEGDPDAQWLLAR-----QGERMLVPTAVSSEA-AADVAPAAAATVRPEQLQ 174 ALE VA G +AQWL+A+ G A+SS + + + A + + Sbjct: 119 WMALEAVAHAGFGEAQWLMAQLIGHANGCDGTDLRALSSHSFHSTILKMPACDTAKKSVL 178 Query: 175 QWTQKAADAGIEQAQHALADSAWQQSDFAAFRQRAQPLADALL--RQHEQQVAQLNAPSE 232 +WT AA G+ +AQHALA+ AWQ + F Q A PLA + RQ L P Sbjct: 179 EWTVLAAGGGVTRAQHALAEHAWQAGNHDDFLQWALPLARQAVARRQSRPMTDALEEPV- 237 Query: 233 ALAAALGAQNIQLLRRLAEVHQSDKRPDLLQAQQLLELAALACDRDAQLALGLLYGRVDA 292 + LL R +EV + D + ++ LE+AA DR + LALGL +GR+D Sbjct: 238 -------IDDTSLLARCSEVLMARGNVDAAELERFLEVAASGGDRQSCLALGLWFGRMDG 290 Query: 293 SGERRFAGQGSANYKKAIRWLTLAGEQGMAAAWFVLSRIYLKPEFSQRNLADVQHYLERA 352 +G R +G ANYKKA+RWL AGEQG+A AWF SRIYLKPEFSQRNL D +Y+++A Sbjct: 291 NGTRLTEVRGLANYKKALRWLVAAGEQGLAEAWFATSRIYLKPEFSQRNLLDSYYYVQKA 350 Query: 353 AEMGHVGAQVECGVGAWRNRRDDPANDVRALYWLQKAASQGAQQAQALLDKVADRPQSAA 412 AE GH AQ+E G+ AWR+RR+D + DV A +WLQKAA+QG Q+AQ LL K+AD A Sbjct: 351 AEAGHTVAQLELGIAAWRSRRNDQSKDVEAAFWLQKAAAQGNQEAQQLLRKIADGAVPAL 410 Query: 413 WAVQARAQMSREQVNAHPFLAARIELAMLFGLTRPEALLIDLKQADCGHCLMIDIRSQYA 472 WA AR ++ ++ PFL AR+ELA +FGL+R EALL+++ ADCGHCL+IDIR + Sbjct: 411 WAESAREKLVHDRNRTAPFLVARLELAAVFGLSRAEALLLNVNAADCGHCLLIDIRDVHP 470 Query: 473 RSKRRLIMVETGEQRGTLNRIGRLFEDMDCGPSGPEGNYRQRLYRLKTVLPQ 524 RSKRRLI++++ EQR L+RI RLF+D+DC GPEGNYRQRLYRL+ ++P+ Sbjct: 471 RSKRRLILIQSNEQRQALSRIVRLFDDVDCSIKGPEGNYRQRLYRLRMLVPE 522 >ref|YP_003773620.1| TPR repeat, SEL1 subfamily protein [Herbaspirillum seropedicae SmR1] gb|ADJ61712.1| TPR repeat, SEL1 subfamily protein [Herbaspirillum seropedicae SmR1] Length = 513 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 269/524 (51%), Positives = 347/524 (66%), Gaps = 15/524 (2%) Query: 1 MANREDLAIIRAARAGDAQAQLNLGQRYLFGGNGLPQSPGTAWHWLERAARQGLADAWML 60 MA RE+LA+I+AARAG+++AQL LG+RYL GG+GLP+S GTA++WL RAA+QG+ DAWM+ Sbjct: 1 MATREELAVIKAARAGESRAQLALGRRYLNGGSGLPRSKGTAFYWLRRAAQQGVDDAWMI 60 Query: 61 IARHIPYEVVSQLGKPHEAAQWYERAFEAGATRAGLTLARLVLEHPAGVAAASPEQKNRA 120 I R+I YE V +L P EAA WYE+AFEAG +AGL ARLVL++ + + + RA Sbjct: 61 IGRNITYEQVKELSPPREAAVWYEKAFEAGVPQAGLIFARLVLDNTSEFDSNT---HARA 117 Query: 121 LRALETVAAEGDPDAQWLLARQGERMLVPTAVSSEAAADVAPAAAATVRPEQLQQWTQKA 180 + AL +A+ D +AQWLLA+Q +R P + P AAA P + +A Sbjct: 118 IAALSLLASRDDHEAQWLLAQQMQRHGQP----------MLPGAAAA-SPAYEDKLMLEA 166 Query: 181 ADAGIEQAQHALADSAWQQSDFAAFRQRAQPLADALLRQHEQQVAQLNAPSEALAAA-LG 239 A AGIE+AQ+A+ D AWQQ D A+F + AQ + LL +H VAQL + A L Sbjct: 167 ARAGIEEAQYAVLDKAWQQGDEASFARGAQRVTQRLLARHANAVAQLEKDGQIHGAVQLS 226 Query: 240 AQNIQLLRRLAEVHQSDKRPDLLQAQQLLELAALACDRDAQLALGLLYGRVDASGERRFA 299 + LL R + PD + Q L ELAA+ + A L LGLL ++D GER F Sbjct: 227 DEEATLLLRYGQWRLRGASPDPDELQILFELAAMGGNAQACLELGLLCAKIDRQGERIFM 286 Query: 300 GQGSANYKKAIRWLTLAGEQGMAAAWFVLSRIYLKPEFSQRNLADVQHYLERAAEMGHVG 359 G AN+KKA+ WL AGE G+A W L+RIY + +SQRNL QHYLE+AA+ G V Sbjct: 287 EHGLANFKKALHWLERAGEAGVAQGWHALARIYSRSIYSQRNLQVAQHYLEKAAQAGLVE 346 Query: 360 AQVECGVGAWRNRRDDPANDVRALYWLQKAASQGAQQAQALLDKVADRPQSAAWAVQARA 419 AQ E WR+RRDDP NDV+ALYW Q+AA+QG AQA LD A +P + WA+QA+A Sbjct: 347 AQCELAQVCWRHRRDDPLNDVKALYWWQQAAAQGEPTAQAALDAFAAQPDAQGWALQAQA 406 Query: 420 QMSREQVNAHPFLAARIELAMLFGLTRPEALLIDLKQADCGHCLMIDIRSQYARSKRRLI 479 ++ + N+ PFL+ARIELA FGLT+PEALLID+K AD GHCL++DI + +ARSKRRLI Sbjct: 407 LLTDKLRNSSPFLSARIELAATFGLTKPEALLIDIKAADYGHCLVVDICAHHARSKRRLI 466 Query: 480 MVETGEQRGTLNRIGRLFEDMDCGPSGPEGNYRQRLYRLKTVLP 523 V+T QR TLNR+ RLF D+DCG G EGNYRQR YRL+T P Sbjct: 467 AVQTDAQRATLNRVSRLFGDVDCGFDGLEGNYRQRQYRLRTTFP 510 >ref|ZP_04577601.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gb|EEO28563.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 536 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 254/540 (47%), Positives = 340/540 (62%), Gaps = 32/540 (5%) Query: 1 MANREDLAIIRAARAGDAQAQLNLGQRYLFGGNGLPQSPGTAWHWLERAARQGLADAWML 60 MA+RE+L ++R AR GD +Q LG+ YLFG LPQS TA HWL RAARQG A A L Sbjct: 24 MASREELQLLRKARTGDTASQFALGELYLFGSKSLPQSLTTALHWLGRAARQGDAAAKRL 83 Query: 61 IARHIPYEVVSQLGKPHEAAQWYERAFEAGATRAGLTLARLVLEHPAGVAAASPEQKNRA 120 I HIPYEV + +WY A + G RAGL LA+L+L +G A S ++++ A Sbjct: 84 IGNHIPYEVANLHPDRQLLERWYRDALDEGCYRAGLVLAKLLLS--SGTATDS-KKRSEA 140 Query: 121 LRALETVAAEGDPDAQWLLARQGERMLVPTAVSSEAAADVAPAAAATVRPEQLQQWTQKA 180 + LE + P+AQWLLA + + +P + ++ WT A Sbjct: 141 IAILEKIVDHDIPEAQWLLAEL-----------VKNSNRYSPLKGSALK------WTACA 183 Query: 181 ADAGIEQAQHALADSAWQQSDFAAFRQRAQPLADALLRQHEQQVAQLNAPSEALAAALGA 240 A+AGI AQ AL + AW+ +D+ F Q A P+A +LL+ Q A A ++ +A L Sbjct: 184 ANAGIVDAQIALIEHAWKNADYETFLQHALPIARSLLQSGAQPEA---ADTDGHSARLLL 240 Query: 241 QNIQLLRRLAEVHQSDKRPDLLQAQQLLELAALACDRDAQLALGLLYGRVDASGERRFAG 300 + QLL + Q D + + Q + E+AA + +A LGL + R+D +G+R G Sbjct: 241 RCGQLLFK----EQGDSAAE--EIQSMWEMAARYKNAEAAFLLGLWHARMDENGKRTLFG 294 Query: 301 QGSANYKKAIRWLTLAGEQGMAAAWFVLSRIYLKPEFSQRNLADVQHYLERAAEMGHVGA 360 G ++KKAI WLT AG QG+ AW+ LS IY K EFSQRNL+ Q YLE AA +GH A Sbjct: 295 AGPTSFKKAIHWLTQAGGQGLPKAWYALSLIYQKAEFSQRNLSAAQRYLETAANLGHPRA 354 Query: 361 QVECGVGAWRNRRDDPANDVRALYWLQKAASQGAQQAQALLDKVADRPQSAAWAVQARAQ 420 Q E G+ AWRNRRD+ +NDV+A+YWLQKA G +A LLD++A + Q A WAV+A Sbjct: 355 QYERGLHAWRNRRDNESNDVQAVYWLQKATGNGQTEAATLLDRIAVKAQPALWAVKALQH 414 Query: 421 MSREQVNAHPFLAARIELAMLFGLTRPEALLIDLKQADCGHCLMIDIRSQYARSKRRLIM 480 ++RE V++HPFLAAR+ELA +FGL+RPEALL+D+ AD GHCL++DIR Y RSKRRLI+ Sbjct: 415 LTRETVSSHPFLAARLELAAVFGLSRPEALLLDIHSADKGHCLLVDIREFYRRSKRRLIL 474 Query: 481 VETGEQRGTLNRIGRLFEDMDCGPSGPEGNYRQRLYRLKTVLP---QSQEEDEAQEQGLA 537 ++TG++R T++RIGRLFE +DCG GPEGNYRQR YRLKT+LP Q ED+ Q L+ Sbjct: 475 IQTGKERQTVSRIGRLFEKVDCGLKGPEGNYRQRQYRLKTLLPPVTQEPPEDDTAPQALS 534