BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5395.p (277 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777654.1| polypeptide chain release factors methylase ... 414 e-113 ref|YP_001351901.1| methylase of polypeptide chain release facto... 331 7e-89 ref|YP_004754562.1| hypothetical protein CFU_3916 [Collimonas fu... 316 2e-84 ref|YP_001098546.1| protein methyltransferase HemK [Herminiimona... 309 3e-82 ref|ZP_08273722.1| methylase of polypeptide chain release factor... 299 2e-79 >ref|YP_003777654.1| polypeptide chain release factors methylase [Herbaspirillum seropedicae SmR1] gb|ADJ65746.1| polypeptide chain release factors methylase protein [Herbaspirillum seropedicae SmR1] Length = 277 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 230/277 (83%), Positives = 250/277 (90%) Query: 1 MEPLSSYAGCTLATVLKTAPLEPLENRILLCHALRMTRVQLITQSERRLDAAESEALTAL 60 M L SYAGCTLATVLKTAPL+PLENRILLCHALR+TRVQLITQSER+L AAE+E L AL Sbjct: 1 MPILPSYAGCTLATVLKTAPLDPLENRILLCHALRLTRVQLITQSERQLSAAEAETLAAL 60 Query: 61 YTRRLRGEPIAYIIGQREFYGLDLRVTPDVLIPRPDTELLVELAMERLPQGAALLDMGTG 120 RRLRGEPIAYI+GQREFYGLDLRV+PDVLIPRPDTELLVELA+ERLPQG + LDMGTG Sbjct: 61 LARRLRGEPIAYIVGQREFYGLDLRVSPDVLIPRPDTELLVELALERLPQGGSALDMGTG 120 Query: 121 SGAIAIAIAHTRPDAVVTALDASAGALAIARENATANQVRLTLLESDWYAALPQGQRFAV 180 SGAIA+AIAHTRPDA VTALDAS ALAIARENA+ +QVR+ LLESDWY AL Q F + Sbjct: 121 SGAIAVAIAHTRPDAQVTALDASPAALAIARENASTHQVRVRLLESDWYGALDADQAFDL 180 Query: 181 IASNPPYIVAGDVHLSQGDLRFEPVDALTDHADGLSDLRSIIDGAPGHLLPGGWLLMEHG 240 I SNPPYIVAGD+HLSQGDLRFEPVDALTDHADGLSDLR+II+GAP HL GGWLLMEHG Sbjct: 181 IVSNPPYIVAGDIHLSQGDLRFEPVDALTDHADGLSDLRTIIEGAPAHLKAGGWLLMEHG 240 Query: 241 YDQAAAVRGLLSGTGFKEVRSWRDLAGIERVSGARLG 277 YDQAAAVR LL+G G++EV+SWRDLAGIERVSGARLG Sbjct: 241 YDQAAAVRALLTGGGWREVQSWRDLAGIERVSGARLG 277 >ref|YP_001351901.1| methylase of polypeptide chain release factors [Janthinobacterium sp. Marseille] gb|ABR88634.1| methylase of polypeptide chain release factors [Janthinobacterium sp. Marseille] Length = 280 Score = 331 bits (849), Expect = 7e-89, Method: Composition-based stats. Identities = 177/268 (66%), Positives = 212/268 (79%), Gaps = 1/268 (0%) Query: 8 AGCTLATVLKTAPLEPLENRILLCHALRMTRVQLITQSERRLDAAESEALTALYTRRLRG 67 AG T+A V++ AP+ LE RILL + R++RVQLITQ+ER L A E++ L+ L+ RRL G Sbjct: 10 AGTTVAAVMQRAPVAQLEARILLGYVTRLSRVQLITQAERALTAEEAQQLSQLFARRLAG 69 Query: 68 EPIAYIIGQREFYGLDLRVTPDVLIPRPDTELLVELAMERLPQGAALLDMGTGSGAIAIA 127 EPIAY+ G+REF+GL V+P VLIPRPDTELLVELA+ LP +LDMGTGSGAIA+A Sbjct: 70 EPIAYLTGEREFFGLSFDVSPAVLIPRPDTELLVELALHYLPPQGRVLDMGTGSGAIAVA 129 Query: 128 IAHTRPDAVVTALDASAGALAIARENATANQVRLTLLESDWYAALPQGQRFAVIASNPPY 187 IAH RPDA VTALD SA ALAIA NA NQV++ L SDW++A+ + QRF +I SNPPY Sbjct: 130 IAHARPDAFVTALDVSAEALAIAEGNARKNQVQVNFLRSDWFSAVKE-QRFDLIVSNPPY 188 Query: 188 IVAGDVHLSQGDLRFEPVDALTDHADGLSDLRSIIDGAPGHLLPGGWLLMEHGYDQAAAV 247 IVAGD HLS+GDLRFEPVDALTDHA+GLSDL++I A +L P WLLMEHGYDQAAAV Sbjct: 189 IVAGDPHLSEGDLRFEPVDALTDHANGLSDLQTITRDAARYLAPAAWLLMEHGYDQAAAV 248 Query: 248 RGLLSGTGFKEVRSWRDLAGIERVSGAR 275 R +L+ GF EV+SWRDLAGIERVSG + Sbjct: 249 RDVLATHGFTEVQSWRDLAGIERVSGGK 276 >ref|YP_004754562.1| hypothetical protein CFU_3916 [Collimonas fungivorans Ter331] gb|AEK63739.1| hypothetical protein CFU_3916 [Collimonas fungivorans Ter331] Length = 290 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 182/275 (66%), Positives = 210/275 (76%), Gaps = 8/275 (2%) Query: 8 AGCTLATVLKTAPLEPLENRILLCHALRMTRVQLITQSERRLDAAESEALTALYTRRLRG 67 AG ++A +LK APL PLENRILL HAL++TR+QLITQ ER +D ++ L+ L+ RRL G Sbjct: 12 AGASIAAILKQAPLNPLENRILLMHALQLTRIQLITQDERTIDTGQARRLSTLFQRRLLG 71 Query: 68 EPIAYIIGQREFYGLDLRVTPDVLIPRPDTELLVELAMERLPQGA-----ALLDMGTGSG 122 EPIAYIIGQREFYGL L VTPDVLIPRP+TELLV+LA++ LP A ++LD+GTGSG Sbjct: 72 EPIAYIIGQREFYGLQLEVTPDVLIPRPETELLVDLALQHLPAAAGPETLSVLDLGTGSG 131 Query: 123 AIAIAIAHTRPDAVVTALDASAGALAIARENATANQV--RLTLLESDWYAALPQGQRFAV 180 AIA+AIAH+RPD +TALD SA ALA+A NA +L LL S WY AL Q F + Sbjct: 132 AIAVAIAHSRPDLQLTALDVSAAALAVASRNAARYLAPGQLQLLLSSWYGALDDRQ-FNL 190 Query: 181 IASNPPYIVAGDVHLSQGDLRFEPVDALTDHADGLSDLRSIIDGAPGHLLPGGWLLMEHG 240 I +NPPYIVAGD HL+QGDLRFEP DALTDHADGLS LR IIDGA HL GGWLLMEHG Sbjct: 191 IVANPPYIVAGDSHLAQGDLRFEPQDALTDHADGLSALRIIIDGAARHLKDGGWLLMEHG 250 Query: 241 YDQAAAVRGLLSGTGFKEVRSWRDLAGIERVSGAR 275 YDQA AVR LL F V+SW D+AGIERVSG R Sbjct: 251 YDQAPAVRELLQAQQFDAVQSWEDIAGIERVSGGR 285 >ref|YP_001098546.1| protein methyltransferase HemK [Herminiimonas arsenicoxydans] emb|CAL60417.1| Protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Herminiimonas arsenicoxydans] Length = 276 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 177/268 (66%), Positives = 216/268 (80%), Gaps = 1/268 (0%) Query: 8 AGCTLATVLKTAPLEPLENRILLCHALRMTRVQLITQSERRLDAAESEALTALYTRRLRG 67 AG T+A +L+ AP+E LE R+L+ H +++RVQLIT +ER L+AAE++ L L+ RR+ G Sbjct: 6 AGDTIAAILRRAPVEQLEARMLIGHVTQLSRVQLITNAERVLNAAEAQQLATLFARRMAG 65 Query: 68 EPIAYIIGQREFYGLDLRVTPDVLIPRPDTELLVELAMERLPQGAALLDMGTGSGAIAIA 127 EP+AY++G+REFYGL +V+P VLIPRPDTELLVELA++RLPQ +LDMGTGSGAIAIA Sbjct: 66 EPMAYLLGEREFYGLSFQVSPAVLIPRPDTELLVELALQRLPQQGRVLDMGTGSGAIAIA 125 Query: 128 IAHTRPDAVVTALDASAGALAIARENATANQVRLTLLESDWYAALPQGQRFAVIASNPPY 187 IAH RPDAVVTALD S ALA+A NA ++ R+ L SDW+AAL G++F +I SNPPY Sbjct: 126 IAHARPDAVVTALDVSEAALAVASANAHRHKARVECLRSDWFAAL-DGRQFDLIVSNPPY 184 Query: 188 IVAGDVHLSQGDLRFEPVDALTDHADGLSDLRSIIDGAPGHLLPGGWLLMEHGYDQAAAV 247 IVAGD HLS+GDLRFEP+DAL+DHADGLS LR I + A HL GWLLMEHGYDQAAAV Sbjct: 185 IVAGDRHLSEGDLRFEPIDALSDHADGLSALRIISEHAADHLSDDGWLLMEHGYDQAAAV 244 Query: 248 RGLLSGTGFKEVRSWRDLAGIERVSGAR 275 RGLL+ GF EV+SWRDLA IERVSG + Sbjct: 245 RGLLAENGFGEVQSWRDLAQIERVSGGK 272 >ref|ZP_08273722.1| methylase of polypeptide chain release factor [Oxalobacteraceae bacterium IMCC9480] gb|EGF32800.1| methylase of polypeptide chain release factor [Oxalobacteraceae bacterium IMCC9480] Length = 278 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 166/268 (61%), Positives = 204/268 (76%), Gaps = 1/268 (0%) Query: 8 AGCTLATVLKTAPLEPLENRILLCHALRMTRVQLITQSERRLDAAESEALTALYTRRLRG 67 AG T+ VL+ E RILL HAL +TR++LIT +E+ L A+++ ++AL+ RR+ G Sbjct: 6 AGETIEAVLRQPAPLLAERRILLGHALGLTRIELITGNEQMLTPAQAQRVSALFERRIAG 65 Query: 68 EPIAYIIGQREFYGLDLRVTPDVLIPRPDTELLVELAMERLPQGAALLDMGTGSGAIAIA 127 EPIAY++G REFYGL VTP VLIPRP+TELLVELA++RLP+ +LDMGTGSGAIA+A Sbjct: 66 EPIAYLVGTREFYGLRFEVTPAVLIPRPETELLVELAIDRLPRQGRVLDMGTGSGAIAVA 125 Query: 128 IAHTRPDAVVTALDASAGALAIARENATANQVRLTLLESDWYAALPQGQRFAVIASNPPY 187 +A++R DA V+A+D S ALA+AR NA + V++ L SDWYAAL +GQ F +I +NPPY Sbjct: 126 LANSRRDAAVSAIDFSDAALAVARRNAAHHAVQVHLQRSDWYAAL-EGQCFDMIVANPPY 184 Query: 188 IVAGDVHLSQGDLRFEPVDALTDHADGLSDLRSIIDGAPGHLLPGGWLLMEHGYDQAAAV 247 IV GD HLS+GDLRFEPVDALTDHADGLS LR I+ GA L P GWLLMEHGYDQAAAV Sbjct: 185 IVEGDHHLSEGDLRFEPVDALTDHADGLSALRQIVSGATAALAPAGWLLMEHGYDQAAAV 244 Query: 248 RGLLSGTGFKEVRSWRDLAGIERVSGAR 275 LL F +V+SW DLAGI RVSG R Sbjct: 245 CALLDAAQFTDVQSWPDLAGIARVSGGR 272