BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5394.p (164 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777653.1| transmembrane disulfide bond formation B oxi... 223 1e-56 ref|ZP_08273721.1| Periplasmic thiol:disulfide oxidoreductase Ds... 142 2e-32 ref|YP_002005739.1| disulfide bond formation protein b [Cupriavi... 139 1e-31 ref|YP_296140.1| disulfide bond formation protein B [Ralstonia e... 138 3e-31 ref|YP_726577.1| disulfide bond formation protein B [Ralstonia e... 137 4e-31 >ref|YP_003777653.1| transmembrane disulfide bond formation B oxidoreductase [Herbaspirillum seropedicae SmR1] gb|ADJ65745.1| transmembrane disulfide bond formation B oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 164 Score = 223 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 144/164 (87%), Positives = 147/164 (89%) Query: 1 MKSSKAVFLLVALVCAALLGVAMYLQIVEEMQPCPLCVIQRYMFVLVGAFALIGVVLPAS 60 MKSSK VFLLVALVC ALLG AMYLQIVEEMQPCPLCVIQRYMFVLV AFALIG LP + Sbjct: 1 MKSSKPVFLLVALVCIALLGFAMYLQIVEEMQPCPLCVIQRYMFVLVAAFALIGAFLPEA 60 Query: 61 ARRPSAALGLLAALGGAGTAIWHLYVKAHPGVSCTTDPLETTLNHLPMVKLWPQMFTADG 120 ARR SAAL LAALGGAGTAIWHLYVKAHPGVSCTTDPLET LN LP KLWPQMFTADG Sbjct: 61 ARRASAALAALAALGGAGTAIWHLYVKAHPGVSCTTDPLETALNQLPTAKLWPQMFTADG 120 Query: 121 FCSAPWPPVFGLQIPTWSLIWFGVLALVLAVQLFKRAPRTTIWK 164 FCSAPWPPVFGLQIPTWSLIWF VLALVL VQ+ +RAPRTTIWK Sbjct: 121 FCSAPWPPVFGLQIPTWSLIWFAVLALVLIVQMLRRAPRTTIWK 164 >ref|ZP_08273721.1| Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation [Oxalobacteraceae bacterium IMCC9480] gb|EGF32799.1| Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation [Oxalobacteraceae bacterium IMCC9480] Length = 158 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 87/157 (55%), Positives = 99/157 (63%) Query: 1 MKSSKAVFLLVALVCAALLGVAMYLQIVEEMQPCPLCVIQRYMFVLVGAFALIGVVLPAS 60 MK+SK + L VAL ALLGVA+YLQ+VE MQPCPLC+IQRY F V LI LP Sbjct: 1 MKNSKPILLCVALASFALLGVALYLQVVERMQPCPLCIIQRYAFAAVALICLIFAFLPRG 60 Query: 61 ARRPSAALGLLAALGGAGTAIWHLYVKAHPGVSCTTDPLETTLNHLPMVKLWPQMFTADG 120 A A L AL GAGTA WHL+VKAHP +SC DPLET LN L P +F ADG Sbjct: 61 ASATGAGFAALVALAGAGTAGWHLWVKAHPEISCGIDPLETALNTLAPANWLPLVFKADG 120 Query: 121 FCSAPWPPVFGLQIPTWSLIWFGVLALVLAVQLFKRA 157 FCS P+ P+ GL IP WSL+WF L+L KR Sbjct: 121 FCSTPYAPILGLSIPQWSLVWFVGFVLILGRIALKRG 157 >ref|YP_002005739.1| disulfide bond formation protein b [Cupriavidus taiwanensis LMG 19424] emb|CAQ69674.1| disulfide bond formation protein [Cupriavidus taiwanensis LMG 19424] Length = 161 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 74/154 (48%), Positives = 104/154 (67%), Gaps = 1/154 (0%) Query: 3 SSKAVFLLVALVCAALLGVAMYLQIVEEMQPCPLCVIQRYMFVLVGAFALIGVVLPASAR 62 +S+A FLL+A+V AL+GVA+YLQI + QPCPLCV+QR+ F+ +G F+L+ V + R Sbjct: 4 NSRAYFLLIAIVSFALVGVALYLQIEKGYQPCPLCVMQRFAFIGIGLFSLLAAV-AQNTR 62 Query: 63 RPSAALGLLAALGGAGTAIWHLYVKAHPGVSCTTDPLETTLNHLPMVKLWPQMFTADGFC 122 LG+L+ + G A++H+ + +P SC DPLE +N LP K+ PQ+F +DG C Sbjct: 63 SLWQGLGMLSGIAGIAVAVYHVSLLLNPKASCGIDPLENWVNALPTAKVLPQLFYSDGLC 122 Query: 123 SAPWPPVFGLQIPTWSLIWFGVLALVLAVQLFKR 156 +AP PPV GL +P WSLIW +L L LAV L +R Sbjct: 123 TAPLPPVLGLSVPAWSLIWLFILTLTLAVGLIRR 156 >ref|YP_296140.1| disulfide bond formation protein B [Ralstonia eutropha JMP134] sp|Q46ZY7|DSBB_RALEJ RecName: Full=Disulfide bond formation protein B; AltName: Full=Disulfide oxidoreductase gb|AAZ61296.1| disulfide bond formation protein DsbB [Ralstonia eutropha JMP134] Length = 161 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 70/154 (45%), Positives = 102/154 (66%), Gaps = 1/154 (0%) Query: 3 SSKAVFLLVALVCAALLGVAMYLQIVEEMQPCPLCVIQRYMFVLVGAFALIGVVLPASAR 62 +S+A FLL+A + L+G A+YLQ + QPCPLC++QR+ F+ +G F+L+ V+ + R Sbjct: 4 NSRAYFLLIAFISFGLVGFALYLQFEKGYQPCPLCIMQRFAFIGIGLFSLLAVI-AQNTR 62 Query: 63 RPSAALGLLAALGGAGTAIWHLYVKAHPGVSCTTDPLETTLNHLPMVKLWPQMFTADGFC 122 LG+L+ +GG A++H+ + +P SC DPLE +N LP K+ PQ+F +DG C Sbjct: 63 SLWQGLGMLSGVGGIAVAVYHVSLLLNPKASCGIDPLENWVNALPTAKVLPQVFYSDGLC 122 Query: 123 SAPWPPVFGLQIPTWSLIWFGVLALVLAVQLFKR 156 +AP PPV GL +P WSLIW +L L LAV L +R Sbjct: 123 TAPLPPVLGLSVPAWSLIWLFILTLTLAVGLIRR 156 >ref|YP_726577.1| disulfide bond formation protein B [Ralstonia eutropha H16] ref|YP_004685857.1| disulfide bond formation protein B [Cupriavidus necator N-1] sp|Q0K9W2|DSBB_RALEH RecName: Full=Disulfide bond formation protein B; AltName: Full=Disulfide oxidoreductase emb|CAJ93209.1| disulfide bond formation protein [Ralstonia eutropha H16] gb|AEI77376.1| disulfide bond formation protein B [Cupriavidus necator N-1] Length = 161 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 74/154 (48%), Positives = 101/154 (65%), Gaps = 1/154 (0%) Query: 3 SSKAVFLLVALVCAALLGVAMYLQIVEEMQPCPLCVIQRYMFVLVGAFALIGVVLPASAR 62 +S+A FLL+ALV L+GVA+YLQ + QPCPLCV+QR+ F+ +G F+L+ V + R Sbjct: 4 NSRAYFLLIALVSFGLVGVALYLQFEKGYQPCPLCVMQRFAFIGIGIFSLLAAV-AQNTR 62 Query: 63 RPSAALGLLAALGGAGTAIWHLYVKAHPGVSCTTDPLETTLNHLPMVKLWPQMFTADGFC 122 LG+L+ + G A++H+ + +P SC DPLE +N LP K PQ+F ADG C Sbjct: 63 SLWQGLGMLSGIAGIAVAVYHVSLLLNPKASCGIDPLENWVNALPTAKALPQVFYADGLC 122 Query: 123 SAPWPPVFGLQIPTWSLIWFGVLALVLAVQLFKR 156 +AP PPV GL +P WSLIW +L L LAV L +R Sbjct: 123 TAPLPPVLGLSVPAWSLIWLFILTLTLAVGLIRR 156