BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.5386.p         (92 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777646.1| plasmid maintenance system killer protein [H...   172   2e-41
ref|YP_552134.1| plasmid maintenance system killer [Polaromonas ...   168   3e-40
ref|YP_516134.1| plasmid maintenance system killer [Rhodoferax f...   161   4e-38
gb|EGB59863.1| plasmid maintenance system killer protein [Escher...   142   2e-32
ref|YP_002755259.1| addiction module killer protein, HigB family...   140   9e-32

>ref|YP_003777646.1| plasmid maintenance system killer protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ65738.1| plasmid maintenance system killer protein [Herbaspirillum
           seropedicae SmR1]
          Length = 132

 Score =  172 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 85/92 (92%), Positives = 90/92 (97%)

Query: 1   MIKSFRHKGLQRFFETGSKAGIQAAHAGRLRLQLAALEQAIRPEDLSAPAWALHPLKGDL 60
           MIK+FRHKGLQRFFETGSKAGIQAAHAG+LRLQLAAL+QA +PEDLSAPAWALHPLKG+L
Sbjct: 41  MIKNFRHKGLQRFFETGSKAGIQAAHAGKLRLQLAALDQATQPEDLSAPAWALHPLKGEL 100

Query: 61  KGQWAITVNGNWRLIFAFEGKDAVLVDYRDYH 92
           KG WAITVNGNWRLIFAFEGKDAVLVDYRDYH
Sbjct: 101 KGLWAITVNGNWRLIFAFEGKDAVLVDYRDYH 132


>ref|YP_552134.1| plasmid maintenance system killer [Polaromonas sp. JS666]
 gb|ABE47236.1| plasmid maintenance system killer [Polaromonas sp. JS666]
          Length = 101

 Score =  168 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 80/92 (86%), Positives = 88/92 (95%)

Query: 1   MIKSFRHKGLQRFFETGSKAGIQAAHAGRLRLQLAALEQAIRPEDLSAPAWALHPLKGDL 60
           MIK+FRHKGLQRFFE+GSKAGIQAAHA +LRLQLAAL+QAI+PEDLSAPAW+LHPLKGDL
Sbjct: 10  MIKNFRHKGLQRFFESGSKAGIQAAHAPKLRLQLAALDQAIKPEDLSAPAWSLHPLKGDL 69

Query: 61  KGQWAITVNGNWRLIFAFEGKDAVLVDYRDYH 92
           KG WA+TVNGNWRL+F FEG DAVLVDYRDYH
Sbjct: 70  KGHWAVTVNGNWRLVFCFEGTDAVLVDYRDYH 101


>ref|YP_516134.1| plasmid maintenance system killer [Rhodoferax ferrireducens T118]
 gb|ABD72136.1| plasmid maintenance system killer [Rhodoferax ferrireducens T118]
          Length = 92

 Score =  161 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 75/92 (81%), Positives = 85/92 (92%)

Query: 1  MIKSFRHKGLQRFFETGSKAGIQAAHAGRLRLQLAALEQAIRPEDLSAPAWALHPLKGDL 60
          MIK+FRHKGL+RFF  G+KAGIQAAHA RLRLQL AL+QA+RPEDLSAPAW LHPLKGD+
Sbjct: 1  MIKTFRHKGLERFFREGTKAGIQAAHANRLRLQLLALDQAVRPEDLSAPAWGLHPLKGDM 60

Query: 61 KGQWAITVNGNWRLIFAFEGKDAVLVDYRDYH 92
          KG WA+TVNGNWR++FAF+G DAVLVDYRDYH
Sbjct: 61 KGHWAVTVNGNWRMVFAFDGTDAVLVDYRDYH 92


>gb|EGB59863.1| plasmid maintenance system killer protein [Escherichia coli M863]
          Length = 98

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 68/93 (73%), Positives = 79/93 (84%), Gaps = 1/93 (1%)

Query: 1  MIKSFRHKGLQRFFETGSKAGIQAAHAGRLRLQLAALEQAIRPEDLSAPAWALHPLKG-D 59
          +IKSFRHKGL+ FF+TGS AGIQA HA +LR+QL AL  A RP+D+SAP W LHPLKG D
Sbjct: 6  LIKSFRHKGLEHFFKTGSTAGIQAKHAVKLRIQLTALNMAKRPDDMSAPGWKLHPLKGAD 65

Query: 60 LKGQWAITVNGNWRLIFAFEGKDAVLVDYRDYH 92
          LKG WAI+VNGNWRL F FEG+DA+LVDY+DYH
Sbjct: 66 LKGHWAISVNGNWRLTFRFEGEDAILVDYQDYH 98


>ref|YP_002755259.1| addiction module killer protein, HigB family [Acidobacterium
          capsulatum ATCC 51196]
 gb|ACO32148.1| addiction module killer protein, HigB family [Acidobacterium
          capsulatum ATCC 51196]
          Length = 92

 Score =  140 bits (352), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 64/92 (69%), Positives = 76/92 (82%)

Query: 1  MIKSFRHKGLQRFFETGSKAGIQAAHAGRLRLQLAALEQAIRPEDLSAPAWALHPLKGDL 60
          MI+SFRH G++RFF TGSKAGIQ AHA +LRLQLAAL  A RPED+ AP W LHPLKG+ 
Sbjct: 1  MIRSFRHPGVERFFLTGSKAGIQPAHANKLRLQLAALHAATRPEDMCAPGWDLHPLKGNR 60

Query: 61 KGQWAITVNGNWRLIFAFEGKDAVLVDYRDYH 92
          +G W++ VNGNWRL F F+G DA+LVDY+DYH
Sbjct: 61 EGHWSVKVNGNWRLTFRFDGPDAILVDYQDYH 92