BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5384.p (379 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777644.1| ABC transporter periplasmic/surface lipoprot... 681 0.0 ref|YP_004750885.1| ABC transporter periplasmic protein [Collimo... 600 e-169 ref|YP_725449.1| ABC-type transporter, periplasmic component [Ra... 575 e-162 ref|YP_004684728.1| ABC transporter permease [Cupriavidus necato... 573 e-161 ref|YP_002004915.1| outer membrane lipoprotein [Cupriavidus taiw... 569 e-160 >ref|YP_003777644.1| ABC transporter periplasmic/surface lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ65736.1| ABC-type transport system, periplasmic component/surface lipoprotein [Herbaspirillum seropedicae SmR1] Length = 379 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 377/379 (99%), Positives = 379/379 (100%) Query: 1 MKISRRASLTMLATLAAATLIGCGKKEEPAAAAPAAAPAAAAPAADPLKVAFVYIGPVGD 60 MKISRRASLTMLATLAAATLIGCGKKEEPAAAAPAAAPAAAAPAADPLKVAFVYIGPVGD Sbjct: 1 MKISRRASLTMLATLAAATLIGCGKKEEPAAAAPAAAPAAAAPAADPLKVAFVYIGPVGD 60 Query: 61 AGWTFAHDKGRKAVEEKFGDKVKTTFVENIPESAADAERVFRQLATDGNKLIFGTTFGYM 120 AGWTFAHDKGRKAVEEKFGDKVKTTFVENIPESAADAERVFRQLATDGNKLIFGTTFGYM Sbjct: 61 AGWTFAHDKGRKAVEEKFGDKVKTTFVENIPESAADAERVFRQLATDGNKLIFGTTFGYM 120 Query: 121 EAMLKVAKEFPDVKFEHATGFKTADNLAQYDVRTYEGAYLAGVVAGKMSKSGKLGVVASV 180 EAMLKVAKEFPDVKFEHATGFKTADNLAQYDVRTYEGAYLAGVVAGKMSKSGKLGVVASV Sbjct: 121 EAMLKVAKEFPDVKFEHATGFKTADNLAQYDVRTYEGAYLAGVVAGKMSKSGKLGVVASV 180 Query: 181 PIPEVIRNIDSFTLGARSVNPKATTAVVWVNKWFDPGKEREAATTLIGQGVDVLMQNTDS 240 PIPEVIRNIDSFTLGARSVNPKATTAVVWVNKWFDPGKEREAATTLIGQGVDVLMQNTDS Sbjct: 181 PIPEVIRNIDSFTLGARSVNPKATTAVVWVNKWFDPGKEREAATTLIGQGVDVLMQNTDS 240 Query: 241 AAVVQTAQEKGVYAFGWDSDMTSFGPKAHLAASMINWGVYYTARVQAVLDGSWKSSTSWI 300 AAVVQTAQEKGVYAFGWDSDMTSFGPKAHLAAS+INWGVYYTARVQAVLDGSWKSSTSWI Sbjct: 241 AAVVQTAQEKGVYAFGWDSDMTSFGPKAHLAASVINWGVYYTARVQAVLDGSWKSSTSWI 300 Query: 301 GLKENGIDLAAFNPELPADVKSLVEERKKGIVDGSAPIWKGPIKDNAGKEVLGKDAVADD 360 GLKENGIDLAAFNPELPADVK+LVEERKKGIVDGSAPIWKGPIKDNAGKEVLGKDAVADD Sbjct: 301 GLKENGIDLAAFNPELPADVKTLVEERKKGIVDGSAPIWKGPIKDNAGKEVLGKDAVADD 360 Query: 361 GFLHGIKFYVEGVDGKVPG 379 GFLHGIKFYVEGVDGKVPG Sbjct: 361 GFLHGIKFYVEGVDGKVPG 379 >ref|YP_004750885.1| ABC transporter periplasmic protein [Collimonas fungivorans Ter331] gb|AEK60062.1| ABC-type transporter, periplasmic component [Collimonas fungivorans Ter331] Length = 391 Score = 600 bits (1547), Expect = e-169, Method: Composition-based stats. Identities = 336/380 (88%), Positives = 352/380 (92%), Gaps = 1/380 (0%) Query: 1 MKISRRASLTMLATLAAATLIGCGKK-EEPAAAAPAAAPAAAAPAADPLKVAFVYIGPVG 59 MKISRRASL ML LAAATLIGCGKK E PA AA A APAAA A+PLKVAFVYIGPVG Sbjct: 12 MKISRRASLAMLTALAAATLIGCGKKGETPAPAASATAPAAAPAKAEPLKVAFVYIGPVG 71 Query: 60 DAGWTFAHDKGRKAVEEKFGDKVKTTFVENIPESAADAERVFRQLATDGNKLIFGTTFGY 119 DAGWTFAHDKGRKAVEEK+GDKVKTTFVEN+PESAADAERV RQLA DGNKLIFGTTFGY Sbjct: 72 DAGWTFAHDKGRKAVEEKYGDKVKTTFVENVPESAADAERVIRQLAVDGNKLIFGTTFGY 131 Query: 120 MEAMLKVAKEFPDVKFEHATGFKTADNLAQYDVRTYEGAYLAGVVAGKMSKSGKLGVVAS 179 MEAMLKVAKEFPDVKFEHATGFKTADNLAQYDVRTYEGAYLAGVVAGKMSKSGKLGVVAS Sbjct: 132 MEAMLKVAKEFPDVKFEHATGFKTADNLAQYDVRTYEGAYLAGVVAGKMSKSGKLGVVAS 191 Query: 180 VPIPEVIRNIDSFTLGARSVNPKATTAVVWVNKWFDPGKEREAATTLIGQGVDVLMQNTD 239 VPIPEVIRNIDSFTLGARSVNPKATT VVWVNKWFDPGKEREAATTLIGQGVDVLMQNTD Sbjct: 192 VPIPEVIRNIDSFTLGARSVNPKATTRVVWVNKWFDPGKEREAATTLIGQGVDVLMQNTD 251 Query: 240 SAAVVQTAQEKGVYAFGWDSDMTSFGPKAHLAASMINWGVYYTARVQAVLDGSWKSSTSW 299 SAAVVQTAQEKGVYAFGWDSDMTSFGPKAH AASMINW VYY RV VLDG+WK+ +SW Sbjct: 252 SAAVVQTAQEKGVYAFGWDSDMTSFGPKAHQAASMINWSVYYNKRVGEVLDGTWKTGSSW 311 Query: 300 IGLKENGIDLAAFNPELPADVKSLVEERKKGIVDGSAPIWKGPIKDNAGKEVLGKDAVAD 359 +GLKE+GIDL AFNP+LPAD+K+LV ERKK I+DGSAPIWKGP+ DN GKEV+ KDAVAD Sbjct: 312 LGLKEDGIDLGAFNPDLPADIKALVAERKKAIIDGSAPIWKGPVVDNTGKEVVAKDAVAD 371 Query: 360 DGFLHGIKFYVEGVDGKVPG 379 D FLHGIKFYV+GV+GKVPG Sbjct: 372 DAFLHGIKFYVQGVEGKVPG 391 >ref|YP_725449.1| ABC-type transporter, periplasmic component [Ralstonia eutropha H16] emb|CAJ92081.1| ABC-type transporter, periplasmic component [Ralstonia eutropha H16] Length = 381 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 310/381 (81%), Positives = 339/381 (88%), Gaps = 2/381 (0%) Query: 1 MKISRRASLTMLATLAAATLIGCGKKE--EPAAAAPAAAPAAAAPAADPLKVAFVYIGPV 58 M ++RR +L LA A TL GCGKKE +PA A AA+ AA A+PLKVAFVYIGPV Sbjct: 1 MIVTRRKTLAALAATALLTLAGCGKKEADKPAETAGAASAPAAEQKAEPLKVAFVYIGPV 60 Query: 59 GDAGWTFAHDKGRKAVEEKFGDKVKTTFVENIPESAADAERVFRQLATDGNKLIFGTTFG 118 GDAGWTFAHD GRKAVEEKFGDKVKT+FVEN+PESAADAERVFR LA+ GNKLIFGTTFG Sbjct: 61 GDAGWTFAHDNGRKAVEEKFGDKVKTSFVENVPESAADAERVFRDLASQGNKLIFGTTFG 120 Query: 119 YMEAMLKVAKEFPDVKFEHATGFKTADNLAQYDVRTYEGAYLAGVVAGKMSKSGKLGVVA 178 YME+MLKVAKEFPDVKFEHATGFKTA+NLAQYDVRTYEGAYLAGVVAGKMSK+GK+GVVA Sbjct: 121 YMESMLKVAKEFPDVKFEHATGFKTAENLAQYDVRTYEGAYLAGVVAGKMSKTGKMGVVA 180 Query: 179 SVPIPEVIRNIDSFTLGARSVNPKATTAVVWVNKWFDPGKEREAATTLIGQGVDVLMQNT 238 SVPIPEVIRNIDSFTLGARSVNPKAT VVWVNKWFDPGKEREAATTLIGQGVD+LMQNT Sbjct: 181 SVPIPEVIRNIDSFTLGARSVNPKATVKVVWVNKWFDPGKEREAATTLIGQGVDMLMQNT 240 Query: 239 DSAAVVQTAQEKGVYAFGWDSDMTSFGPKAHLAASMINWGVYYTARVQAVLDGSWKSSTS 298 DSAAVVQTAQEKGV+AFGWDSDM+ FG KAHLAAS+I+WGVYY V+ VL+ WK+ST+ Sbjct: 241 DSAAVVQTAQEKGVHAFGWDSDMSKFGDKAHLAASVISWGVYYNKVVEDVLNKQWKNSTT 300 Query: 299 WIGLKENGIDLAAFNPELPADVKSLVEERKKGIVDGSAPIWKGPIKDNAGKEVLGKDAVA 358 W GLKE IDL +FN ++PADVK+LVEERKKGI DGSAPIWKGPIKDN GKE L KD VA Sbjct: 301 WWGLKEGMIDLKSFNADVPADVKALVEERKKGIADGSAPIWKGPIKDNTGKEQLAKDQVA 360 Query: 359 DDGFLHGIKFYVEGVDGKVPG 379 DDGFLHG+KFYVEGV+GK+PG Sbjct: 361 DDGFLHGVKFYVEGVEGKIPG 381 >ref|YP_004684728.1| ABC transporter permease [Cupriavidus necator N-1] gb|AEI76247.1| ABC transport system permease protein [Cupriavidus necator N-1] Length = 381 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 309/381 (81%), Positives = 336/381 (88%), Gaps = 2/381 (0%) Query: 1 MKISRRASLTMLATLAAATLIGCGKKE--EPAAAAPAAAPAAAAPAADPLKVAFVYIGPV 58 M ++RR +L LA A L GCGKKE +PA A AA+ AA A+PLKVAFVYIGPV Sbjct: 1 MIVTRRKTLAALAATAVLALAGCGKKEADKPAETAGAASAPAAGQKAEPLKVAFVYIGPV 60 Query: 59 GDAGWTFAHDKGRKAVEEKFGDKVKTTFVENIPESAADAERVFRQLATDGNKLIFGTTFG 118 GDAGWTFAHD GRKAVEEKFGDKVKTTFVEN+PESAADAERVFR LA+ GNKLIFGTTFG Sbjct: 61 GDAGWTFAHDTGRKAVEEKFGDKVKTTFVENVPESAADAERVFRDLASQGNKLIFGTTFG 120 Query: 119 YMEAMLKVAKEFPDVKFEHATGFKTADNLAQYDVRTYEGAYLAGVVAGKMSKSGKLGVVA 178 YME+MLKVAKEFPDVKFEHATGFKTA+NLAQYDVRTYEGAYLAGVVAGKMSK+GK+GVVA Sbjct: 121 YMESMLKVAKEFPDVKFEHATGFKTAENLAQYDVRTYEGAYLAGVVAGKMSKTGKMGVVA 180 Query: 179 SVPIPEVIRNIDSFTLGARSVNPKATTAVVWVNKWFDPGKEREAATTLIGQGVDVLMQNT 238 SVPIPEVIRNIDSFTLGARSVNPKAT VVWVNKWFDPGKEREAATTLIGQGVD+LMQNT Sbjct: 181 SVPIPEVIRNIDSFTLGARSVNPKATVKVVWVNKWFDPGKEREAATTLIGQGVDMLMQNT 240 Query: 239 DSAAVVQTAQEKGVYAFGWDSDMTSFGPKAHLAASMINWGVYYTARVQAVLDGSWKSSTS 298 DSAAVVQTAQEKGV+AFGWDSDM+ FG KAHLAAS+I+WGVYY V+ VL+ WK+ T+ Sbjct: 241 DSAAVVQTAQEKGVHAFGWDSDMSKFGDKAHLAASVISWGVYYNKVVEDVLNKQWKNGTT 300 Query: 299 WIGLKENGIDLAAFNPELPADVKSLVEERKKGIVDGSAPIWKGPIKDNAGKEVLGKDAVA 358 W GLKE IDL FN ++PADVK+LVEERKKGI DGSAPIWKGPIKDN GKE L KD VA Sbjct: 301 WWGLKEGMIDLKGFNADVPADVKALVEERKKGIADGSAPIWKGPIKDNTGKEQLAKDQVA 360 Query: 359 DDGFLHGIKFYVEGVDGKVPG 379 DDGFLHG+KFYVEGV+GK+PG Sbjct: 361 DDGFLHGVKFYVEGVEGKIPG 381 >ref|YP_002004915.1| outer membrane lipoprotein [Cupriavidus taiwanensis LMG 19424] emb|CAQ68846.1| putative outer membrane LIPOPROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 381 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 307/381 (80%), Positives = 337/381 (88%), Gaps = 2/381 (0%) Query: 1 MKISRRASLTMLATLAAATLIGCGKKE--EPAAAAPAAAPAAAAPAADPLKVAFVYIGPV 58 M ++RR +L LA A L GCGKKE +PA A AA+ AA AA+PLKVAFVYIGPV Sbjct: 1 MIVTRRKTLAALAATAVLALAGCGKKEAEKPAEPAGAASAPAAGQAAEPLKVAFVYIGPV 60 Query: 59 GDAGWTFAHDKGRKAVEEKFGDKVKTTFVENIPESAADAERVFRQLATDGNKLIFGTTFG 118 GDAGWTFAHD GRKAVEEKFG KVKTTFVEN+PESAADAERVFR LA+ GNKLIFGTTFG Sbjct: 61 GDAGWTFAHDNGRKAVEEKFGSKVKTTFVENVPESAADAERVFRDLASQGNKLIFGTTFG 120 Query: 119 YMEAMLKVAKEFPDVKFEHATGFKTADNLAQYDVRTYEGAYLAGVVAGKMSKSGKLGVVA 178 YME+MLKVAKEFPDVKFEHATGFKTADNLAQYDVRTYEGAYLAGVVAGKMSK+GK+GVVA Sbjct: 121 YMESMLKVAKEFPDVKFEHATGFKTADNLAQYDVRTYEGAYLAGVVAGKMSKTGKMGVVA 180 Query: 179 SVPIPEVIRNIDSFTLGARSVNPKATTAVVWVNKWFDPGKEREAATTLIGQGVDVLMQNT 238 SVPIPEVIRNIDSFTLGARSVNP AT VVWVNKWFDPGKEREAATTLIGQGVD+LMQNT Sbjct: 181 SVPIPEVIRNIDSFTLGARSVNPNATVKVVWVNKWFDPGKEREAATTLIGQGVDMLMQNT 240 Query: 239 DSAAVVQTAQEKGVYAFGWDSDMTSFGPKAHLAASMINWGVYYTARVQAVLDGSWKSSTS 298 DSAAVVQTAQEKGV+AFGWDSDMT FG KAHLAAS+I+WGVYY V+ VL+ WK+ST+ Sbjct: 241 DSAAVVQTAQEKGVHAFGWDSDMTKFGDKAHLAASVISWGVYYNKVVEDVLNNQWKNSTT 300 Query: 299 WIGLKENGIDLAAFNPELPADVKSLVEERKKGIVDGSAPIWKGPIKDNAGKEVLGKDAVA 358 W GLKE IDL ++N ++PADVK+LV+ERKKGI+DG+APIWKGPIKDN GKE L KD VA Sbjct: 301 WWGLKEGMIDLKSYNADVPADVKALVDERKKGIIDGTAPIWKGPIKDNTGKEQLAKDQVA 360 Query: 359 DDGFLHGIKFYVEGVDGKVPG 379 DD FLHG+KFYVEGV+GK+PG Sbjct: 361 DDKFLHGVKFYVEGVEGKIPG 381