BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5378.p (329 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777638.1| nitrate/sulfonate/bicarbonate ABC transporte... 605 e-171 ref|ZP_08275793.1| twin-arginine translocation pathway signal [O... 521 e-146 ref|YP_724985.1| ABC transporter periplasmic protein [Ralstonia ... 457 e-127 ref|YP_004684335.1| TauT family ABC transporter permease [Cupria... 453 e-125 ref|YP_001795800.1| precursor ABC-type nitrate/sulfonate/bicarbo... 452 e-125 >ref|YP_003777638.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ65730.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 373 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 313/326 (96%), Positives = 321/326 (98%) Query: 4 SSSLALAQETKVKFQLDWRFEGPAALFLVAKSKGYFAQEKLDVTIDAGNGSGNAVNRVAS 63 S+S AQ+T++KFQLDWRFEGPAALFLVAKSKGYFAQEKLDVTIDAGNGSGNAVNRVAS Sbjct: 48 SASSTFAQDTRIKFQLDWRFEGPAALFLVAKSKGYFAQEKLDVTIDAGNGSGNAVNRVAS 107 Query: 64 GTYDMGFADMAALMEFTANNPDAPGKPVAVMMVYNDTPAAVFSLKKSGIKKPADLAGKKL 123 GTYDMGFADMAALMEFTANNPDAPGKPVAVMMVYNDTPAAVFSLKKSGIKKPADLAGKKL Sbjct: 108 GTYDMGFADMAALMEFTANNPDAPGKPVAVMMVYNDTPAAVFSLKKSGIKKPADLAGKKL 167 Query: 124 GAPVFDAGRRAYPIFAKANGLDASKAQWTSMDPPLRETMLARGDVDAITGFYFTSLLNLN 183 GAPVFDAGRRAYPIFAKANGLDASKAQWTSMDPPLRETMLARGDVDAITGFYFTSLLNLN Sbjct: 168 GAPVFDAGRRAYPIFAKANGLDASKAQWTSMDPPLRETMLARGDVDAITGFYFTSLLNLN 227 Query: 184 ARGIKDEDINVMMYPDYGVRLYGNTIIASETMVKQKPEAIKGFLRAFAKASRDVMANPEA 243 ARGIKDEDINVMMYPDYGVRLYGNTIIAS+TMVK KPEAIKGFLRAFAKASRDVMA+PEA Sbjct: 228 ARGIKDEDINVMMYPDYGVRLYGNTIIASDTMVKNKPEAIKGFLRAFAKASRDVMAHPEA 287 Query: 244 AIKVLKERDGLIDEKLELRRLKLAIASAIATPHAKAEGYGQVYSPRLTLMASQVSDAYGT 303 AIKVLKERDGLIDEKLELRRLKLAIASAIATPHAK+EGYGQVY PRLTLMASQVSDAYGT Sbjct: 288 AIKVLKERDGLIDEKLELRRLKLAIASAIATPHAKSEGYGQVYGPRLTLMASQVSDAYGT 347 Query: 304 KTRVNADKIWNGSFLPSKAELDVFPK 329 KTRVNADKIWNGSFLP+KAELDVFPK Sbjct: 348 KTRVNADKIWNGSFLPTKAELDVFPK 373 >ref|ZP_08275793.1| twin-arginine translocation pathway signal [Oxalobacteraceae bacterium IMCC9480] gb|EGF30736.1| twin-arginine translocation pathway signal [Oxalobacteraceae bacterium IMCC9480] Length = 321 Score = 521 bits (1341), Expect = e-146, Method: Composition-based stats. Identities = 271/321 (84%), Positives = 299/321 (93%) Query: 9 LAQETKVKFQLDWRFEGPAALFLVAKSKGYFAQEKLDVTIDAGNGSGNAVNRVASGTYDM 68 +A++TK+KFQLDWRFEGPAALFLVAKSKGYF QE+LDVTIDAGNGSGNAVNRVASG YDM Sbjct: 1 MAEDTKIKFQLDWRFEGPAALFLVAKSKGYFTQEQLDVTIDAGNGSGNAVNRVASGAYDM 60 Query: 69 GFADMAALMEFTANNPDAPGKPVAVMMVYNDTPAAVFSLKKSGIKKPADLAGKKLGAPVF 128 GFADMAALMEF NNP AP KPV VMMVYNDTPAAVF+LKKSGIK PADLAGKKLGAPVF Sbjct: 61 GFADMAALMEFVGNNPTAPSKPVGVMMVYNDTPAAVFALKKSGIKTPADLAGKKLGAPVF 120 Query: 129 DAGRRAYPIFAKANGLDASKAQWTSMDPPLRETMLARGDVDAITGFYFTSLLNLNARGIK 188 DAGRRAYP+FAKANGLDA+KA W SMDP LRETML RGDVDAITGFYFTSLLNLNARGIK Sbjct: 121 DAGRRAYPVFAKANGLDATKANWISMDPALRETMLVRGDVDAITGFYFTSLLNLNARGIK 180 Query: 189 DEDINVMMYPDYGVRLYGNTIIASETMVKQKPEAIKGFLRAFAKASRDVMANPEAAIKVL 248 DED+ VM+YP+YGV+LYGN IIAS+TMVKQKPEAIKGFLRAFAKA++DVMA+P+AA KV+ Sbjct: 181 DEDVVVMLYPNYGVKLYGNAIIASDTMVKQKPEAIKGFLRAFAKAAKDVMADPDAAAKVV 240 Query: 249 KERDGLIDEKLELRRLKLAIASAIATPHAKAEGYGQVYSPRLTLMASQVSDAYGTKTRVN 308 KERDGL+DEKLE RRLKLAIASAIATP+AKAEG+GQV +PRL+LMASQVSD Y TKTRV+ Sbjct: 241 KERDGLVDEKLEARRLKLAIASAIATPNAKAEGFGQVSAPRLSLMASQVSDTYATKTRVD 300 Query: 309 ADKIWNGSFLPSKAELDVFPK 329 + +WNGSFLP+KA L+VFPK Sbjct: 301 PNTVWNGSFLPAKAALNVFPK 321 >ref|YP_724985.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] emb|CAJ91617.1| ABC-type transporter, periplasmic component: TauT family [Ralstonia eutropha H16] Length = 380 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 225/315 (71%), Positives = 269/315 (85%) Query: 13 TKVKFQLDWRFEGPAALFLVAKSKGYFAQEKLDVTIDAGNGSGNAVNRVASGTYDMGFAD 72 TKV+FQLDWRFEGPAALFL+ + KGY+ EKLDV+IDAGNGSGN VNRVASGTYDMGFAD Sbjct: 65 TKVRFQLDWRFEGPAALFLLGEQKGYYKAEKLDVSIDAGNGSGNVVNRVASGTYDMGFAD 124 Query: 73 MAALMEFTANNPDAPGKPVAVMMVYNDTPAAVFSLKKSGIKKPADLAGKKLGAPVFDAGR 132 M+++MEF NNPDA KPVAVMMVYN+TPAAV +LKKSGI+ P DLAGK++GAPVFDAGR Sbjct: 125 MSSVMEFYGNNPDAKNKPVAVMMVYNNTPAAVLALKKSGIRAPKDLAGKRMGAPVFDAGR 184 Query: 133 RAYPIFAKANGLDASKAQWTSMDPPLRETMLARGDVDAITGFYFTSLLNLNARGIKDEDI 192 RA+PIFA+ANGL AS W +MDP LRETML RGD+DAITGF FTS+LNLNARG+KDEDI Sbjct: 185 RAFPIFARANGLQASSFNWQAMDPTLRETMLTRGDLDAITGFSFTSILNLNARGVKDEDI 244 Query: 193 NVMMYPDYGVRLYGNTIIASETMVKQKPEAIKGFLRAFAKASRDVMANPEAAIKVLKERD 252 V+ YP +GV+LYGN +IASE +K+ PEA+K FLRAF+K++RDV+A PE IK +K RD Sbjct: 245 VVLPYPQFGVKLYGNAVIASEDFMKKNPEAVKAFLRAFSKSARDVIARPEEGIKAVKARD 304 Query: 253 GLIDEKLELRRLKLAIASAIATPHAKAEGYGQVYSPRLTLMASQVSDAYGTKTRVNADKI 312 G+IDEKLE+RRLKLA+ S + +P AKAEG+G+V PRL+LMASQV+DA+GTK R+N D + Sbjct: 305 GIIDEKLEVRRLKLALDSVVKSPDAKAEGFGRVSEPRLSLMASQVADAFGTKGRINPDAL 364 Query: 313 WNGSFLPSKAELDVF 327 W +FLPS AELDV Sbjct: 365 WTDAFLPSAAELDVL 379 >ref|YP_004684335.1| TauT family ABC transporter permease [Cupriavidus necator N-1] gb|AEI75854.1| ABC transport system permease protein TauT family [Cupriavidus necator N-1] Length = 380 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 225/320 (70%), Positives = 270/320 (84%) Query: 8 ALAQETKVKFQLDWRFEGPAALFLVAKSKGYFAQEKLDVTIDAGNGSGNAVNRVASGTYD 67 A A TKV+FQLDWRFEGPAALFL+ + KGY+ EKLDV+IDAGNGSGN VNRVASGTYD Sbjct: 60 AQAAPTKVRFQLDWRFEGPAALFLLGEQKGYYKAEKLDVSIDAGNGSGNVVNRVASGTYD 119 Query: 68 MGFADMAALMEFTANNPDAPGKPVAVMMVYNDTPAAVFSLKKSGIKKPADLAGKKLGAPV 127 MGFADM+++MEF NNPDA KPVAVMMVYN+TPAAV +LKKSGI+ P DLAGK++GAPV Sbjct: 120 MGFADMSSVMEFYGNNPDAKNKPVAVMMVYNNTPAAVLALKKSGIRAPKDLAGKRMGAPV 179 Query: 128 FDAGRRAYPIFAKANGLDASKAQWTSMDPPLRETMLARGDVDAITGFYFTSLLNLNARGI 187 FDAGRRA+PIFAKANGL S W +MDP LRETML RGD+DAITGF FTS+LNLNARG+ Sbjct: 180 FDAGRRAFPIFAKANGLQPSSFNWQAMDPTLRETMLTRGDLDAITGFSFTSILNLNARGV 239 Query: 188 KDEDINVMMYPDYGVRLYGNTIIASETMVKQKPEAIKGFLRAFAKASRDVMANPEAAIKV 247 KDED+ V+ YP +GV+LYGN +IASE +K+ PEA+K FLRAF+K++RDV+A PE IK Sbjct: 240 KDEDMVVLPYPQFGVKLYGNAVIASEEFIKKNPEAVKAFLRAFSKSARDVIARPEEGIKA 299 Query: 248 LKERDGLIDEKLELRRLKLAIASAIATPHAKAEGYGQVYSPRLTLMASQVSDAYGTKTRV 307 +K RDG+IDEKLE+RRLKLA+ S + +P AKAEG+G++ PRL+LMASQV+DA+GTK R+ Sbjct: 300 VKARDGIIDEKLEVRRLKLALDSVVKSPDAKAEGFGRISKPRLSLMASQVADAFGTKGRI 359 Query: 308 NADKIWNGSFLPSKAELDVF 327 N D +W +FLPS AELDV Sbjct: 360 NPDALWTDAFLPSAAELDVL 379 >ref|YP_001795800.1| precursor ABC-type nitrate/sulfonate/bicarbonate transporter, periplasmic component [Cupriavidus taiwanensis LMG 19424] emb|CAP63078.1| putative precursor ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component [Cupriavidus taiwanensis LMG 19424] Length = 380 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 223/315 (70%), Positives = 268/315 (85%) Query: 13 TKVKFQLDWRFEGPAALFLVAKSKGYFAQEKLDVTIDAGNGSGNAVNRVASGTYDMGFAD 72 T+V+FQLDWRFEGPAALFL+ + KGY+ EKL+V IDAGNGSGN VNRVASGTYDMGFAD Sbjct: 65 TRVRFQLDWRFEGPAALFLLGEQKGYYKAEKLEVAIDAGNGSGNVVNRVASGTYDMGFAD 124 Query: 73 MAALMEFTANNPDAPGKPVAVMMVYNDTPAAVFSLKKSGIKKPADLAGKKLGAPVFDAGR 132 M+++MEF NNPDA KPVAVMMVYN+TPAA+ +LKKSGI+ P DLAGK++GAPVFDAGR Sbjct: 125 MSSVMEFYGNNPDAKNKPVAVMMVYNNTPAAILALKKSGIRAPKDLAGKRMGAPVFDAGR 184 Query: 133 RAYPIFAKANGLDASKAQWTSMDPPLRETMLARGDVDAITGFYFTSLLNLNARGIKDEDI 192 RA+PIFAKANGL AS W +MDP LRETML RGD+DAITGF FTS+LNLNARG+KDEDI Sbjct: 185 RAFPIFAKANGLQASSFNWQAMDPTLRETMLVRGDLDAITGFSFTSILNLNARGVKDEDI 244 Query: 193 NVMMYPDYGVRLYGNTIIASETMVKQKPEAIKGFLRAFAKASRDVMANPEAAIKVLKERD 252 V+ YP +GV+LYGN +IASE ++Q PEA+K FLRAF+K++RDV+A PE I+ LK RD Sbjct: 245 VVLPYPQFGVKLYGNAVIASEAFIRQNPEAVKAFLRAFSKSARDVIARPEEGIRALKARD 304 Query: 253 GLIDEKLELRRLKLAIASAIATPHAKAEGYGQVYSPRLTLMASQVSDAYGTKTRVNADKI 312 G+IDEKLE RRLKLA+ S + +P AKAEG+G+V PRL+LMASQV+DA+GTK R+NAD + Sbjct: 305 GIIDEKLETRRLKLALDSVVRSPDAKAEGFGRVSKPRLSLMASQVADAFGTKGRINADAL 364 Query: 313 WNGSFLPSKAELDVF 327 W ++LPS AELDV Sbjct: 365 WTDAYLPSAAELDVL 379