BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5368.p (218 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001351724.1| ABC-type amino acid transport system, permea... 301 5e-80 ref|YP_004752055.1| putative amino acid ABC transporter permease... 297 6e-79 ref|YP_472778.1| amino acid ABC transporter permease [Rhizobium ... 296 2e-78 ref|ZP_03524630.1| probable amino acid ABC transporter, permease... 293 2e-77 ref|ZP_03530270.1| amino acid ABC transporter permease [Rhizobiu... 287 6e-76 >ref|YP_001351724.1| ABC-type amino acid transport system, permease component [Janthinobacterium sp. Marseille] gb|ABR89875.1| ABC-type amino acid transport system, permease component [Janthinobacterium sp. Marseille] Length = 218 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 172/218 (78%), Positives = 194/218 (88%) Query: 1 MITFTTWDIVRNLMLAWRWTIVLSLVTFVLGGALGLIILFMRTSRQNWLRQVARLYIELF 60 MI+F+ WDI+RNL+LA RWT+VLSLVTF+LGG LGL+ILF RTS+ LR VAR+YIE+F Sbjct: 1 MISFSLWDILRNLLLAGRWTVVLSLVTFLLGGMLGLLILFFRTSKSGALRNVARIYIEIF 60 Query: 61 QGTPLLMQLFLVFFGIALFGIEVPAWLAAGLALMCWSASYLAEIWRGCVEAIPKGQWEAS 120 QGTPLLMQLFLVFFGIALFGIEVPAWLAAGL L WSAS+LAEIWRGCVEAIP+GQWEAS Sbjct: 61 QGTPLLMQLFLVFFGIALFGIEVPAWLAAGLTLTLWSASFLAEIWRGCVEAIPRGQWEAS 120 Query: 121 SVLAMGYFQQMRYIVLPQAFRIAIAPTVGFGVQIIKSTAVTSIIGFIELSKAGTVITNAT 180 SVLAM Y QQMRY++LPQA RIA+ PT+GF VQIIK TAVTSIIGF+ELSKA TVITNAT Sbjct: 121 SVLAMNYVQQMRYVILPQALRIALPPTIGFSVQIIKGTAVTSIIGFVELSKAATVITNAT 180 Query: 181 FRPFTVFAIVGAFYFVLCWPLSKYSQSLERKYNAAHRH 218 F PFTV+A G FYF+LCWPLS+YSQ LERK++AAH H Sbjct: 181 FMPFTVYAAAGLFYFILCWPLSRYSQFLERKFHAAHSH 218 >ref|YP_004752055.1| putative amino acid ABC transporter permease [Collimonas fungivorans Ter331] gb|AEK61232.1| putative amino acid ABC transporter, permease protein [Collimonas fungivorans Ter331] Length = 218 Score = 297 bits (761), Expect = 6e-79, Method: Composition-based stats. Identities = 168/218 (77%), Positives = 197/218 (90%) Query: 1 MITFTTWDIVRNLMLAWRWTIVLSLVTFVLGGALGLIILFMRTSRQNWLRQVARLYIELF 60 MITF+ WDIVRNL+LA RWT++LSL +F LGG LGLI+LFMRTS+Q WLR++ ++YIELF Sbjct: 1 MITFSVWDIVRNLLLALRWTVLLSLASFALGGLLGLIVLFMRTSKQAWLRRLTKMYIELF 60 Query: 61 QGTPLLMQLFLVFFGIALFGIEVPAWLAAGLALMCWSASYLAEIWRGCVEAIPKGQWEAS 120 QGTPLLMQLFL FFG+ALFG+EVPAWLAA LAL CWS+++LAEIWRGCV+AIP+GQWEAS Sbjct: 61 QGTPLLMQLFLAFFGLALFGLEVPAWLAAALALTCWSSAFLAEIWRGCVDAIPRGQWEAS 120 Query: 121 SVLAMGYFQQMRYIVLPQAFRIAIAPTVGFGVQIIKSTAVTSIIGFIELSKAGTVITNAT 180 S LAM Y QQMR+++LPQA RIAI PTVGF VQI+K TAVTSIIGF+ELSKAGT+ITNAT Sbjct: 121 SCLAMSYMQQMRHVILPQALRIAIPPTVGFSVQIVKGTAVTSIIGFVELSKAGTMITNAT 180 Query: 181 FRPFTVFAIVGAFYFVLCWPLSKYSQSLERKYNAAHRH 218 F+PFTV+A+V YF LCWPLSKYSQSLERK+NAA+RH Sbjct: 181 FQPFTVYALVALMYFALCWPLSKYSQSLERKFNAANRH 218 >ref|YP_472778.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gb|ABC94051.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 219 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 157/218 (72%), Positives = 185/218 (84%) Query: 1 MITFTTWDIVRNLMLAWRWTIVLSLVTFVLGGALGLIILFMRTSRQNWLRQVARLYIELF 60 MITFT WDI+RNL+LA RWT++LSLV+FV GG +GL +LF+R SR+ R +A+ YIELF Sbjct: 1 MITFTLWDILRNLLLATRWTVLLSLVSFVGGGMVGLCLLFLRISRRKPPRVLAKYYIELF 60 Query: 61 QGTPLLMQLFLVFFGIALFGIEVPAWLAAGLALMCWSASYLAEIWRGCVEAIPKGQWEAS 120 QGTPLLMQLF+ FFG+ LFGI+VPAWLAAGLAL+ WSA++L EIWRGCVEA+ KGQWEAS Sbjct: 61 QGTPLLMQLFIAFFGLGLFGIDVPAWLAAGLALILWSAAFLTEIWRGCVEAVAKGQWEAS 120 Query: 121 SVLAMGYFQQMRYIVLPQAFRIAIAPTVGFGVQIIKSTAVTSIIGFIELSKAGTVITNAT 180 + L MG QQMRY++LPQA RIAI PTVGF VQIIK TA+TSIIGF+ELSKAGTV+TNAT Sbjct: 121 ASLGMGRLQQMRYVILPQALRIAIPPTVGFSVQIIKGTALTSIIGFVELSKAGTVVTNAT 180 Query: 181 FRPFTVFAIVGAFYFVLCWPLSKYSQSLERKYNAAHRH 218 F+PFTV+ +V YF LCWPLSK SQ LERK N AHR+ Sbjct: 181 FQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRN 218 >ref|ZP_03524630.1| probable amino acid ABC transporter, permease protein [Rhizobium etli GR56] Length = 219 Score = 293 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 153/218 (70%), Positives = 186/218 (85%) Query: 1 MITFTTWDIVRNLMLAWRWTIVLSLVTFVLGGALGLIILFMRTSRQNWLRQVARLYIELF 60 MI FT WDI+RNL+LA RWTI+LSLV+F+ GGA+GL++LF+R S+ R A+ YIELF Sbjct: 1 MIEFTLWDILRNLLLATRWTILLSLVSFIGGGAVGLVLLFLRISKNKAFRIFAKYYIELF 60 Query: 61 QGTPLLMQLFLVFFGIALFGIEVPAWLAAGLALMCWSASYLAEIWRGCVEAIPKGQWEAS 120 QGTPLLMQLF+ FFG+ LFGI+VPAWLAAGLAL+ W+A++LAEIWRGCVE++ +GQWEAS Sbjct: 61 QGTPLLMQLFIAFFGLGLFGIDVPAWLAAGLALILWTAAFLAEIWRGCVESVARGQWEAS 120 Query: 121 SVLAMGYFQQMRYIVLPQAFRIAIAPTVGFGVQIIKSTAVTSIIGFIELSKAGTVITNAT 180 + LAMG QQMRY++LPQA R+AI PTVGF VQI+K TA+TSIIGF+ELSKAGTV+TNAT Sbjct: 121 ASLAMGRLQQMRYVILPQALRVAIPPTVGFSVQIVKGTALTSIIGFVELSKAGTVVTNAT 180 Query: 181 FRPFTVFAIVGAFYFVLCWPLSKYSQSLERKYNAAHRH 218 F+PFTV+ +V YF LCWPLSK SQ LERK N AHR+ Sbjct: 181 FQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRN 218 >ref|ZP_03530270.1| amino acid ABC transporter permease [Rhizobium etli CIAT 894] Length = 219 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 152/218 (69%), Positives = 182/218 (83%) Query: 1 MITFTTWDIVRNLMLAWRWTIVLSLVTFVLGGALGLIILFMRTSRQNWLRQVARLYIELF 60 MI FT WDI+RNL+LA RWTI+LSLV+F GGA+GL +LF+R ++ R +A+ YIELF Sbjct: 1 MIEFTLWDILRNLLLATRWTILLSLVSFASGGAVGLGLLFLRIGKRKTFRVLAKYYIELF 60 Query: 61 QGTPLLMQLFLVFFGIALFGIEVPAWLAAGLALMCWSASYLAEIWRGCVEAIPKGQWEAS 120 QGTPLLMQLF+ FFG+ LFGI+VPAWLAAGLAL WSA++LAEIWRGCVE+I +GQWEAS Sbjct: 61 QGTPLLMQLFIAFFGLGLFGIDVPAWLAAGLALTLWSAAFLAEIWRGCVESIARGQWEAS 120 Query: 121 SVLAMGYFQQMRYIVLPQAFRIAIAPTVGFGVQIIKSTAVTSIIGFIELSKAGTVITNAT 180 + L M QQMRY++LPQA R+AI PTVGF VQI+K TA+TSIIGF+ELSKAGTV+TNAT Sbjct: 121 ASLGMVRLQQMRYVILPQALRVAIPPTVGFSVQIVKGTALTSIIGFVELSKAGTVVTNAT 180 Query: 181 FRPFTVFAIVGAFYFVLCWPLSKYSQSLERKYNAAHRH 218 F+PFTV+ +V YF LCWPLSK SQ LERK N AHR+ Sbjct: 181 FQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRN 218