BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5366.p (324 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777627.1| amino acid ABC transporter/signal transducti... 468 e-130 ref|YP_001351726.1| ABC transporter substrate binding protein [J... 400 e-109 ref|YP_004752057.1| twin-arginine translocation pathway signal [... 368 e-100 gb|EGP46369.1| amino acid ABC transporter substrate-binding prot... 367 2e-99 ref|ZP_06685209.1| amino acid ABC superfamily ATP binding casset... 367 2e-99 >ref|YP_003777627.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gb|ADJ65719.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 260 Score = 468 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 248/260 (95%), Positives = 255/260 (98%) Query: 65 MKLTKLLLGLMAGAMMFSASAARADALDDIQKHGTLRVAVPADFPPFGSVDSDLKPLGFD 124 MKLTKLLLGLMAGAMMFSAS ARADALDDIQKHGTLRVAVPADFPPFGSVD+DLKP G D Sbjct: 1 MKLTKLLLGLMAGAMMFSASVARADALDDIQKHGTLRVAVPADFPPFGSVDADLKPQGLD 60 Query: 125 IDVANLIAKKMGVKVELIPVSSANRIPYLTTKKVDLVISSMGKNAEREKVIDFSAAYAPF 184 IDVA LIAKK+GVKVELIPVSSANRIPYLTTKKVDLVISSMGKNAEREKVIDFSAAYAPF Sbjct: 61 IDVATLIAKKLGVKVELIPVSSANRIPYLTTKKVDLVISSMGKNAEREKVIDFSAAYAPF 120 Query: 185 FNGVFGPADLPVKSAADLAGKTIAVTRGSVEDLELTKIVPASATVKRYEDNNSTISSFLS 244 FNGVFGPADL VKSAADLAGKTIAVTRGSVEDLELTKIVPASATVKRYEDNNSTISSFLS Sbjct: 121 FNGVFGPADLSVKSAADLAGKTIAVTRGSVEDLELTKIVPASATVKRYEDNNSTISSFLS 180 Query: 245 GQVQLVATGNVVAAAIIAKNPPKKPETKFLIKDSPCFIGLNKGEKKLQDKVDAILADAKK 304 GQVQLVATGNVVAAAIIA+NPPKKPETKFLIKDSPCFIGLNKGEKKLQDKVDAILA++KK Sbjct: 181 GQVQLVATGNVVAAAIIARNPPKKPETKFLIKDSPCFIGLNKGEKKLQDKVDAILAESKK 240 Query: 305 DGSLNAISQKWLGLPLPAGL 324 DGSL+AISQKWLG+PLPAGL Sbjct: 241 DGSLSAISQKWLGMPLPAGL 260 >ref|YP_001351726.1| ABC transporter substrate binding protein [Janthinobacterium sp. Marseille] gb|ABR90168.1| ABC transporter substrate binding protein [Janthinobacterium sp. Marseille] Length = 259 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 209/260 (80%), Positives = 232/260 (89%), Gaps = 1/260 (0%) Query: 65 MKLTKLLLGLMAGAMMFSASAARADALDDIQKHGTLRVAVPADFPPFGSVDSDLKPLGFD 124 MKL+ +L+GLMAGA++ + + ARADALDDIQK G LRVAVP DFPPFGSV +D+ P G D Sbjct: 1 MKLSTILIGLMAGALLLT-NVARADALDDIQKKGVLRVAVPQDFPPFGSVTTDMTPQGLD 59 Query: 125 IDVANLIAKKMGVKVELIPVSSANRIPYLTTKKVDLVISSMGKNAEREKVIDFSAAYAPF 184 IDVA LIAKK+GVKVELIPV+SANRIPYL TKKVDLVISSMGKN EREKVIDFSAAYAPF Sbjct: 60 IDVATLIAKKLGVKVELIPVTSANRIPYLQTKKVDLVISSMGKNPEREKVIDFSAAYAPF 119 Query: 185 FNGVFGPADLPVKSAADLAGKTIAVTRGSVEDLELTKIVPASATVKRYEDNNSTISSFLS 244 FNGVFGPAD V + ADLAGKTI VTRGSVEDLEL+KI P SAT+KRYEDNN TISSFLS Sbjct: 120 FNGVFGPADQKVAAPADLAGKTIGVTRGSVEDLELSKIAPESATIKRYEDNNGTISSFLS 179 Query: 245 GQVQLVATGNVVAAAIIAKNPPKKPETKFLIKDSPCFIGLNKGEKKLQDKVDAILADAKK 304 QVQLVATGNV+AAAIIAKNPPKKPETKFLIK+SPC IGLNKGE+KL +KV+AI+A AKK Sbjct: 180 NQVQLVATGNVIAAAIIAKNPPKKPETKFLIKNSPCSIGLNKGEEKLLEKVNAIIAQAKK 239 Query: 305 DGSLNAISQKWLGLPLPAGL 324 DGSLN +++KWLGLPLPA L Sbjct: 240 DGSLNTLTEKWLGLPLPASL 259 >ref|YP_004752057.1| twin-arginine translocation pathway signal [Collimonas fungivorans Ter331] gb|AEK61234.1| Twin-arginine translocation pathway signal [Collimonas fungivorans Ter331] Length = 259 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 195/242 (80%), Positives = 213/242 (88%) Query: 83 ASAARADALDDIQKHGTLRVAVPADFPPFGSVDSDLKPLGFDIDVANLIAKKMGVKVELI 142 +S ARADAL+DI K G L+VAVP DFPPFGSV SDLKP G DIDVA LIAKKMGVK+ELI Sbjct: 18 SSTARADALEDIVKSGVLKVAVPQDFPPFGSVTSDLKPQGLDIDVATLIAKKMGVKIELI 77 Query: 143 PVSSANRIPYLTTKKVDLVISSMGKNAEREKVIDFSAAYAPFFNGVFGPADLPVKSAADL 202 PV+SANR+PYL TKKVDL+ISS+GKN EREKVI FS AYAPF+NGVFG AD V SAADL Sbjct: 78 PVTSANRVPYLQTKKVDLIISSLGKNPEREKVIAFSDAYAPFYNGVFGGADQKVSSAADL 137 Query: 203 AGKTIAVTRGSVEDLELTKIVPASATVKRYEDNNSTISSFLSGQVQLVATGNVVAAAIIA 262 AGKT+ VTRG+VEDLELTKI PASAT+KRYEDNN TIS+FLSGQVQLVATGNVVAAAIIA Sbjct: 138 AGKTVGVTRGAVEDLELTKIAPASATIKRYEDNNGTISAFLSGQVQLVATGNVVAAAIIA 197 Query: 263 KNPPKKPETKFLIKDSPCFIGLNKGEKKLQDKVDAILADAKKDGSLNAISQKWLGLPLPA 322 KNPPKKPETKFLIK+SPC IGL+K E KL +KV+AILA KKDG LNA+S KWLGLPLPA Sbjct: 198 KNPPKKPETKFLIKNSPCSIGLSKDEPKLLEKVNAILAQTKKDGELNALSVKWLGLPLPA 257 Query: 323 GL 324 L Sbjct: 258 NL 259 >gb|EGP46369.1| amino acid ABC transporter substrate-binding protein [Achromobacter xylosoxidans AXX-A] Length = 260 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 191/260 (73%), Positives = 220/260 (84%) Query: 65 MKLTKLLLGLMAGAMMFSASAARADALDDIQKHGTLRVAVPADFPPFGSVDSDLKPLGFD 124 M LLL L A + +A AD LDDI K GTL+VAVP DFPPFGSV SD+KPLG+D Sbjct: 1 MNRRTLLLSLCTAATLLAAPLTHADTLDDIVKAGTLKVAVPQDFPPFGSVGSDMKPLGYD 60 Query: 125 IDVANLIAKKMGVKVELIPVSSANRIPYLTTKKVDLVISSMGKNAEREKVIDFSAAYAPF 184 ID A LIAK++GVK+EL+PV+SANR+PYL T+KVDLVISS+GKNAEREK IDFS AYAPF Sbjct: 61 IDTAALIAKQLGVKLELVPVTSANRVPYLQTRKVDLVISSLGKNAEREKAIDFSDAYAPF 120 Query: 185 FNGVFGPADLPVKSAADLAGKTIAVTRGSVEDLELTKIVPASATVKRYEDNNSTISSFLS 244 FNGVFGPADL V SAADLAGKTI VTRG+VED+ELTKI P +AT+KRYEDNN TI++FLS Sbjct: 121 FNGVFGPADLKVASAADLAGKTIGVTRGAVEDIELTKIAPPTATLKRYEDNNGTITAFLS 180 Query: 245 GQVQLVATGNVVAAAIIAKNPPKKPETKFLIKDSPCFIGLNKGEKKLQDKVDAILADAKK 304 GQV L+ATGNVVAAAI+A+NPPKKPETKFLIKDSPC+IG+NK E KL+ KV+ ILA+AK+ Sbjct: 181 GQVPLIATGNVVAAAILARNPPKKPETKFLIKDSPCYIGMNKDEPKLRAKVNEILANAKR 240 Query: 305 DGSLNAISQKWLGLPLPAGL 324 DGSL AIS+KWLG LP L Sbjct: 241 DGSLAAISKKWLGADLPKDL 260 >ref|ZP_06685209.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gb|EFF77826.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 260 Score = 367 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 189/260 (72%), Positives = 220/260 (84%) Query: 65 MKLTKLLLGLMAGAMMFSASAARADALDDIQKHGTLRVAVPADFPPFGSVDSDLKPLGFD 124 M LLL L A + +A AD LDDI K G +++AVP DFPPFGSV SD+KPLG+D Sbjct: 1 MNRRTLLLSLCTAASLLAAPLTHADTLDDIVKAGVIKIAVPQDFPPFGSVGSDMKPLGYD 60 Query: 125 IDVANLIAKKMGVKVELIPVSSANRIPYLTTKKVDLVISSMGKNAEREKVIDFSAAYAPF 184 ID A LIAK++GVK+EL+PV+SANR+PYL T+KVDLVISS+GKNAEREK IDFS AYAPF Sbjct: 61 IDTAALIAKQLGVKLELVPVTSANRVPYLQTRKVDLVISSLGKNAEREKAIDFSDAYAPF 120 Query: 185 FNGVFGPADLPVKSAADLAGKTIAVTRGSVEDLELTKIVPASATVKRYEDNNSTISSFLS 244 FNGVFGPADL V SAADLAGKTI VTRG+VED+EL+KI PASAT+KRYEDNN TI++FLS Sbjct: 121 FNGVFGPADLKVSSAADLAGKTIGVTRGAVEDIELSKIAPASATLKRYEDNNGTITAFLS 180 Query: 245 GQVQLVATGNVVAAAIIAKNPPKKPETKFLIKDSPCFIGLNKGEKKLQDKVDAILADAKK 304 GQV ++ATGNVVAAAI+A+NPPKKPETKFLIK+SPC+IG+NK E KL+ KV+ ILA AK Sbjct: 181 GQVPMIATGNVVAAAILARNPPKKPETKFLIKNSPCYIGMNKDEPKLRAKVNDILAAAKH 240 Query: 305 DGSLNAISQKWLGLPLPAGL 324 DGSL+AISQKWLG PLP L Sbjct: 241 DGSLSAISQKWLGAPLPKDL 260