BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5363.p (989 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777625.1| signal peptide protein [Herbaspirillum serop... 1782 0.0 emb|CBJ37308.1| putative polysaccharide transport system compone... 756 0.0 ref|YP_003751807.1| polysaccharide transport system component si... 755 0.0 gb|AEG68461.1| polysaccharide transport system component protein... 755 0.0 emb|CCA84624.1| putative polysaccharide transport system compone... 755 0.0 >ref|YP_003777625.1| signal peptide protein [Herbaspirillum seropedicae SmR1] gb|ADJ65717.1| signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 989 Score = 1782 bits (4616), Expect = 0.0, Method: Composition-based stats. Identities = 915/989 (92%), Positives = 947/989 (95%) Query: 1 MAAAMGNKKTVIRPSSAWRMVRTFVWTLAAAAAALLTGSAPAQGTAATAPAPTSAAFYYG 60 MAAAMGNKKTVIRPSSAWRMVRTFVWTLAAAAAALLTGSAPAQGTAATAPAPTSAAFYYG Sbjct: 1 MAAAMGNKKTVIRPSSAWRMVRTFVWTLAAAAAALLTGSAPAQGTAATAPAPTSAAFYYG 60 Query: 61 VNPPLADLQAFDVAVVEPAFVRNPAARTRAAADGMHQLFAYVSLGEVQPSRPYYKQLPPG 120 VNPPLADLQAFDVAVVEP FVRNPAARTRAAADGMHQLFAYVSLGEVQPSRPYYKQLPPG Sbjct: 61 VNPPLADLQAFDVAVVEPEFVRNPAARTRAAADGMHQLFAYVSLGEVQPSRPYYKQLPPG 120 Query: 121 LLRGDNAAWGSRVIDQTAPGWRDFFLDKIVAPLWAQGWRGFFLDTLDSYQLFAKTDAERA 180 LLRGDNAAWGSRVIDQ APGWRDFFLDKI+APLWAQGWRGFFLDTLDSYQLFAKTDAERA Sbjct: 121 LLRGDNAAWGSRVIDQNAPGWRDFFLDKIIAPLWAQGWRGFFLDTLDSYQLFAKTDAERA 180 Query: 181 AQTQAMIATLREFKRRYPEAKLILNRGFELFPDVAPLTYAVAAESLYRGYDAGRRSYGAV 240 QTQAMIATLREFKRRYPEAKLILNRGFEL P++APLTYAVAAESLYRGYDAGRRSYG V Sbjct: 181 VQTQAMIATLREFKRRYPEAKLILNRGFELLPEIAPLTYAVAAESLYRGYDAGRRSYGPV 240 Query: 241 TDNDRAWLSGQLRTIRDRYRLPAIAIDYVDPFQPGARALARETAKKISADGFLPWVADGT 300 DNDRAWL GQ++T R+RY LP IAIDYVDP Q GARALARETA+KISADGF+PWVADG Sbjct: 241 KDNDRAWLMGQMQTARERYHLPVIAIDYVDPQQSGARALARETAQKISADGFIPWVADGG 300 Query: 301 LMSMGVSSVELVPRNVLVLLDVAQGDDLHTTEAQRFLGIQLNHLGLRYEFREVGREGLPT 360 L+SMGVSSVELVPRNVLVLLDVA+GDDLHTTEAQRFLGIQLNHLGLRYEFR+VGREGLPT Sbjct: 301 LVSMGVSSVELVPRNVLVLLDVAEGDDLHTTEAQRFLGIQLNHLGLRYEFRDVGREGLPT 360 Query: 361 EPLAGRYAGVVTWFRSGTDHQRLGPWIGQRIKEGVPVAIFNAFGFQMTKLSAGMLGLTSF 420 EPLAGRYAGVVTWFRSGT+HQRLGPWIGQRIKEGVPVAIF+AFGFQMTKLSAGMLGLTSF Sbjct: 361 EPLAGRYAGVVTWFRSGTNHQRLGPWIGQRIKEGVPVAIFSAFGFQMTKLSAGMLGLTSF 420 Query: 421 SAPAPEQLEVTQADSELMGFETKPRVDRTQLELVRLTDPAAKSLLRMKDGRNNIYDAAAI 480 SAP PEQL+VT D ELMGFET+PRVDRTQLE VRL+DPAA LLRMKDGR+N YDAAAI Sbjct: 421 SAPVPEQLDVTHYDPELMGFETRPRVDRTQLENVRLSDPAAPVLLRMKDGRDNTYDAAAI 480 Query: 481 MPWGGFALAPFATTTLQVMDPPRWVLQPMLFLKRALRLPAIPVPDVTTEGGRRIQTSHLD 540 PWGGFALAPFA TT V+DPPRWVLQPMLFLKRALRLP + VPDVTTEGGRRIQTSHLD Sbjct: 481 TPWGGFALAPFAITTAPVIDPPRWVLQPMLFLKRALRLPDMAVPDVTTEGGRRIQTSHLD 540 Query: 541 GDGFPSKAEYPGSPFAVEVLQREIWDRYRFPVTVSVVEGELSPQGVYPQLSAQTTALARK 600 GDGFPSKAEYPGSPFAVEVLQREIWDRYRFPVTVSVVEGELSPQGVYPQLSAQTTALARK Sbjct: 541 GDGFPSKAEYPGSPFAVEVLQREIWDRYRFPVTVSVVEGELSPQGVYPQLSAQTTALARK 600 Query: 601 MFTLPYVEPASHSFSHPFNWADAMYDTRTADINQMDGDASRTLDIPNYKFNLQREIKGSM 660 MFTLPY+EPASHSFSHPFNWADAM+DTRTADI QMDGDASRTL+IPNYKFNLQREIKGSM Sbjct: 601 MFTLPYIEPASHSFSHPFNWADAMHDTRTADITQMDGDASRTLEIPNYKFNLQREIKGSM 660 Query: 661 DYINKTLLPPGKKAEVFLWTGNCVPPPEAIAQTYLDGFLNMNGGDTMITRSRNTWTDIAA 720 DYIN TLLPPGKKAEVFLWTGNCVPPPEAIAQTYLDG+LNMNGGDTMIT+SRNTWTDIAA Sbjct: 661 DYINNTLLPPGKKAEVFLWTGNCVPPPEAIAQTYLDGYLNMNGGDTMITKSRNTWTDIAA 720 Query: 721 QGVRKQGWYQVFAPNQDENVYTGNWTGPFYGFERAIESYELTGEPVRFKAVDIYYHFYAG 780 QGVRKQGWYQVFAPNQDENVYTGNWTGPFYGFERAIESYELTGEPVRFKAVDIYYHFYAG Sbjct: 721 QGVRKQGWYQVFAPNQDENVYTGNWTGPFYGFERAIESYELTGEPVRFKAVDIYYHFYAG 780 Query: 781 TKPASVAALHKIHRWAEAQPFTRLYVSQYIRKVIDFENTSIARTADGTLVYRTGEYLRTL 840 TKPASVAALHKIHRWA+AQPFTRLYVSQYIRKVIDFENTSIARTADG LVYRTG +LRTL Sbjct: 781 TKPASVAALHKIHRWAQAQPFTRLYVSQYIRKVIDFENTSIARTADGALVYRTGAHLRTL 840 Query: 841 RIPADAPDVDLSQPGIAGIAPGPSGRYLITSAAEVRLKPPAQPAAPALPMLLEAGGQVGD 900 R+P PD DLS PGIAGIAPGPSGRYLITSAAEVRLKPPAQPAA ALPMLLEAGGQVGD Sbjct: 841 RLPPGTPDYDLSAPGIAGIAPGPSGRYLITSAAEVRLKPPAQPAAQALPMLLEAGGQVGD 900 Query: 901 FQGSVNGNQVELRFSLLANGPSTFSVAGARSCSASADGAALATGKSVSITGQAWYRNFTG 960 FQ SVNGNQVELRFSLLANGPSTFSVAGARSCSASADGAAL GKSVSITGQ+W++NFT Sbjct: 901 FQRSVNGNQVELRFSLLANGPSTFSVAGARSCSASADGAALPAGKSVSITGQSWFKNFTA 960 Query: 961 KTAVHQYDIGSATAPLATTRHLVLVQCTL 989 K+AVHQYDIGS+TA LATTRHLVLVQCTL Sbjct: 961 KSAVHQYDIGSSTAKLATTRHLVLVQCTL 989 >emb|CBJ37308.1| putative polysaccharide transport system component signal peptide protein (ragA) [Ralstonia solanacearum CMR15] Length = 950 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 430/907 (47%), Positives = 559/907 (61%), Gaps = 29/907 (3%) Query: 38 GSAPAQGTAATAPAPTSAAFYYGVNPPLADLQAFDVAVVEPAFVRNPA-ARTRAAADGMH 96 G+ P Q A AP + A++YG PP+A L+AFD VVEP +P+ ART A Sbjct: 33 GAPPVQAATAEVEAP-NIAWFYGDKPPVAQLRAFDAVVVEPDHGFDPSRARTPAT----- 86 Query: 97 QLFAYVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQTAPGWRDFFLDKIVAPLWAQ 156 Q FAYVSLGEV P R +Y++LP L G NAAW SRVIDQ+ P W F++D ++APLW + Sbjct: 87 QWFAYVSLGEVAPGRRWYQELPKAWLAGSNAAWASRVIDQSQPQWPAFYVDHVIAPLWDK 146 Query: 157 GWRGFFLDTLDSYQLFAKTDAERAAQTQAMIATLREFKRRYPEAKLILNRGFELFPDVAP 216 G+RGFFLDTLDSYQL AK A RAAQ M+ +R K RYPEAKLI NRGFE+ P V Sbjct: 147 GYRGFFLDTLDSYQLVAKDPAARAAQEAGMVRVIRAIKARYPEAKLIFNRGFEILPQVHD 206 Query: 217 LTYAVAAESLYRGYDAGRRSYGAVTDNDRAWLSGQLRTIRDRYRLPAIAIDYVDPFQPGA 276 L YAVA ESLYR +D G + Y V++ DRAWL GQ R IRD YRLP I+IDY P Sbjct: 207 LAYAVAFESLYRSWDQGSKQYREVSEADRAWLMGQARKIRDEYRLPVISIDYC---PPAD 263 Query: 277 RALARETAKKISADGFLPWVADGTLMSMGVSSVELVPRNVLVLLDVAQGDDLHTTEAQRF 336 RA ARETAK+I A G +P+V D L ++GV +E++PR VL+L D A D+ T+E RF Sbjct: 264 RACARETAKRIKAQGLIPYVTDPALSTVGVGRIEVLPRKVLILQDRAPNTDIDTSEGVRF 323 Query: 337 LGIQLNHLGLRYEFREVGREGLPTEPLAGRYAGVVTWFRSGTDHQ--RLGPWIGQRIKEG 394 L + LN LG E+ +V + LP E RYAGVV W SG Q L W+ QRI +G Sbjct: 324 LAMPLNFLGYDVEYADVSQP-LPAEVPPDRYAGVVVWINSGPVRQVAALSSWVRQRIHDG 382 Query: 395 VPVAIFNAFGFQMTKLSAGMLGLTSFSAPAPEQLEVTQADSELMGFETKPRVDRTQLELV 454 V +A N G MLGL A L V D ++GFE PR DR + + Sbjct: 383 VRIAFMNELGLPADGSVTDMLGLQLVRGHATGPLSVVSQD-RIVGFEMAPRPDRRAAQPI 441 Query: 455 RLTDPAAKSLLRMKDGRNNIYDAAAIMPWGGFALAPFATTTLQVMDPPRWVLQPMLFLKR 514 R+ +SLLR+K G +DAAAI PWGG+ L P+A +L ++ RWV+QP+ FL+R Sbjct: 442 RV-GADGQSLLRLKSGDFE-FDAAAITPWGGYVLNPYAVLSLGTIEQSRWVIQPLAFLRR 499 Query: 515 ALRLPAIPVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQREIWDRYRFPVTV 574 AL LP +P+PDVT+E GRR+ H+DGDGF S+AE+PG ++ EVL +E+W+RY P T+ Sbjct: 500 ALALPDMPIPDVTSENGRRLMLVHVDGDGFASRAEFPGPDYSGEVLMQEVWERYGIPTTL 559 Query: 575 SVVEGELSPQGVYPQLSAQTTALARKMFTLPYVEPASHSFSHPFNWADAMYDTRTADINQ 634 SV+EGE+ P G+YP+L+ + A+ARKMF LPYVE +H++SHPF W + Sbjct: 560 SVIEGEVGPSGLYPKLTPRLEAIARKMFALPYVELGTHTYSHPFKWGRTVPGVPA---QA 616 Query: 635 MDGDASRTLDIPNYKFNLQREIKGSMDYINKTLLPPGKKAEVFLWTGNCVPPPEAIAQTY 694 GD++ L IP YKF+L+REI GS+ YIN L PP K+ + W+G+C PP A+ + Sbjct: 617 EGGDSAFALTIPGYKFSLEREIGGSIRYINARLAPPDKRVRIVQWSGDCRPPELAVRMAW 676 Query: 695 LDGFLNMNGGDTMITRSRNTWTDIAAQGVRK-QGWYQVFAPNQDENVYTGNWTGPFYGFE 753 G +N+NGGDT ITRS +WT+IAA G+ K G YQVFAPNQ+ENVYT +WTGP+YGF+ Sbjct: 677 DAGVVNINGGDTTITRSSPSWTEIAALGIDKGPGAYQVFAPNQNENVYTNDWTGPYYGFD 736 Query: 754 RAIESYELTGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAEAQPFTRLYVSQYIRKV 813 R IE+ ++T P RFK +++YYH Y+GTK AS+ AL K++ +A AQP +Y ++Y+ KV Sbjct: 737 RLIETLQMTDTPYRFKPINLYYHMYSGTKLASLKALKKVYDYALAQPVLPIYATEYVAKV 796 Query: 814 IDFENTSIARTADGTLVYRTGEYLRTLRIPADAPDVDLSQPGIAGIAPGPSGRY--LITS 871 +DF + +IAR D +V G+ LR LR A G+AG G Y L Sbjct: 797 LDFRDMAIARDGDAWVVRGNGD-LRELRWMAPGTPRLADARGVAGYGKAAGGIYIHLDGG 855 Query: 872 AAEVRLKPPAQPAAPALPMLLEAGGQVGDFQGSVNGNQVELRFSLLANGPSTFSVAGARS 931 AA + AQ A PA L EA V Q NG + F +A A + Sbjct: 856 AARFAVSTAAQAAQPA--YLAEAAAFVQRLQRHGNG----MSFDAGGYYKPFVRLANAGA 909 Query: 932 CSASADG 938 CS DG Sbjct: 910 CSIQVDG 916 >ref|YP_003751807.1| polysaccharide transport system component signal peptide protein (ragA) [Ralstonia solanacearum PSI07] emb|CBJ50510.1| putative polysaccharide transport system component signal peptide protein (ragA) [Ralstonia solanacearum PSI07] Length = 934 Score = 755 bits (1950), Expect = 0.0, Method: Composition-based stats. Identities = 429/921 (46%), Positives = 563/921 (61%), Gaps = 27/921 (2%) Query: 31 AAAALLTGSAPAQGTAATAPAPTSAAFYYGVNPPLADLQAFDVAVVEPAFVRNPAARTRA 90 A A GS P Q T A AP + A++YG P+A L+AFD VVEP +P+ Sbjct: 10 APGAASEGSPPVQTTTAEAP---NIAWFYGDKLPVAQLRAFDAVVVEPDHGFDPSR---- 62 Query: 91 AADGMHQLFAYVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQTAPGWRDFFLDKIV 150 A Q FAYVS+GEV P R +YK+LP L G NAAW SRVIDQ+ P W F++D ++ Sbjct: 63 AKTPTTQWFAYVSVGEVAPERRWYKELPKAWLAGSNAAWASRVIDQSQPQWPAFYVDHVI 122 Query: 151 APLWAQGWRGFFLDTLDSYQLFAKTDAERAAQTQAMIATLREFKRRYPEAKLILNRGFEL 210 APLW +G+RGFFLDTLDSYQL AK DA RAAQ M+ +R K RYPEAKLI NRGFE+ Sbjct: 123 APLWDKGYRGFFLDTLDSYQLVAKDDAARAAQEAGMVRVIRAIKARYPEAKLIFNRGFEI 182 Query: 211 FPDVAPLTYAVAAESLYRGYDAGRRSYGAVTDNDRAWLSGQLRTIRDRYRLPAIAIDYVD 270 P V L YAVA ESLYRG+D G + Y V D DRAWL GQ R IRD YRLP I+IDY Sbjct: 183 LPQVHDLAYAVAFESLYRGWDQGSKQYREVNDADRAWLMGQARKIRDEYRLPVISIDYC- 241 Query: 271 PFQPGARALARETAKKISADGFLPWVADGTLMSMGVSSVELVPRNVLVLLDVAQGDDLHT 330 P RA AR+TAK+I A G +P+V D L ++GV +E++PR VL+L D+ D+ T Sbjct: 242 --PPADRACARDTAKRIKAQGLIPYVTDPALSTIGVGRIEVLPRKVLILQDLTPNTDIDT 299 Query: 331 TEAQRFLGIQLNHLGLRYEFREVGREGLPTEPLAGRYAGVVTWFRSGTDHQ--RLGPWIG 388 +E RFL + LN LG E+ ++ + LP E RYAGVV W SG Q L W+ Sbjct: 300 SEGVRFLAMPLNFLGYDVEYADLSQP-LPAEVPPDRYAGVVVWVNSGPVRQVAALSSWVR 358 Query: 389 QRIKEGVPVAIFNAFGFQMTKLSAGMLGLTSFSAPAPEQLEVTQADSELMGFETKPRVDR 448 QR+++GV +A N G +LGL A L V D ++GFE +PR DR Sbjct: 359 QRVRDGVRIAFMNELGLPADGSVTDLLGLQLVRGRATGPLSVVSQD-RIVGFEMEPRPDR 417 Query: 449 TQLELVRLTDPAAKSLLRMKDGRNNIYDAAAIMPWGGFALAPFATTTLQVMDPPRWVLQP 508 + +R+ +SLLR+K G +DAAAI WGG+ L+P+A +L ++ RWV+QP Sbjct: 418 RAAQPIRV-GANGQSLLRLKSGDFE-FDAAAITEWGGYVLSPYAVFSLGTIEQSRWVIQP 475 Query: 509 MLFLKRALRLPAIPVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQREIWDRY 568 + FL+RAL LP +PVPDVT+E GRR+ H+DGDGF S+AE+PG ++ EVL +E+W+RY Sbjct: 476 LEFLRRALALPDMPVPDVTSENGRRLMLVHVDGDGFASRAEFPGPEYSGEVLMQEVWERY 535 Query: 569 RFPVTVSVVEGELSPQGVYPQLSAQTTALARKMFTLPYVEPASHSFSHPFNWADAMYDTR 628 P T+SV+EGE+ P G+YPQL+ + A+ARKMF LPYVE +H++SHPF W M Sbjct: 536 GIPTTLSVIEGEVGPSGLYPQLTPRLEAVARKMFALPYVELGTHTYSHPFKWGRTMPGVP 595 Query: 629 TADINQMDGDASRTLDIPNYKFNLQREIKGSMDYINKTLLPPGKKAEVFLWTGNCVPPPE 688 T GD + L IP YKF+L+REI GS+ YIN L PPGK+ + W+G+C PP Sbjct: 596 TR-AEGGGGDTAFALTIPGYKFSLEREIGGSIRYINARLAPPGKRVRIVQWSGDCRPPEL 654 Query: 689 AIAQTYLDGFLNMNGGDTMITRSRNTWTDIAAQGVRK-QGWYQVFAPNQDENVYTGNWTG 747 A+ + G +N+NGGDT ITRS +WT+IA G+ K G YQ+FAPNQ+ENVYT +WTG Sbjct: 655 AVRMAWDAGVVNINGGDTTITRSSPSWTEIAPLGIDKGPGAYQIFAPNQNENVYTNDWTG 714 Query: 748 PFYGFERAIESYELTGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAEAQPFTRLYVS 807 P+YGF+R +E+ ++T P RFK ++IYYH Y+GTK AS+ AL K++ +A +QP +Y + Sbjct: 715 PYYGFDRLVETLQMTDTPYRFKPINIYYHMYSGTKLASLKALKKVYDYALSQPVLPVYAT 774 Query: 808 QYIRKVIDFENTSIARTADGTLVYRTGEYLRTLRIPADAPDVDLSQPGIAGIAPGPSGRY 867 +Y+ KV+DF + IAR D +V G+ LR LR A G+AG G Y Sbjct: 775 EYVAKVLDFRDMVIARDGDAWVVRGNGD-LRELRWMAPGSPRLADARGVAGYGKAAGGIY 833 Query: 868 --LITSAAEVRLKPPAQPAAPALPMLLEAGGQVGDFQGSVNGNQVELRFSLLANGPSTFS 925 L AA + AQ A PA L EA V + NG + F Sbjct: 834 IHLDGGAARFAVSTDAQAAQPA--YLAEAAAFVQRLERRGNG----MSFDAGGYYKPFVR 887 Query: 926 VAGARSCSASADGAALATGKS 946 +A A +CS DG T ++ Sbjct: 888 LANAGACSIQVDGRPARTARA 908 >gb|AEG68461.1| polysaccharide transport system component protein [Ralstonia solanacearum Po82] Length = 969 Score = 755 bits (1950), Expect = 0.0, Method: Composition-based stats. Identities = 426/911 (46%), Positives = 560/911 (61%), Gaps = 27/911 (2%) Query: 41 PAQGTAATAPAPTSAAFYYGVNPPLADLQAFDVAVVEPAFVRNPAARTRAAADGMHQLFA 100 PAQ T A AP + A++YG PP+A L+AFD VVEP +P+ A Q FA Sbjct: 55 PAQATTADAP---NIAWFYGDKPPVAQLRAFDAVVVEPDHGFDPSR----AKTPTTQWFA 107 Query: 101 YVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQTAPGWRDFFLDKIVAPLWAQGWRG 160 YVS+GEV P R +YK+LP L G NAAW S VIDQ+ P W F++D+++APLW +G+RG Sbjct: 108 YVSVGEVAPERRWYKELPKAWLAGSNAAWASHVIDQSQPQWPAFYVDRVIAPLWDRGYRG 167 Query: 161 FFLDTLDSYQLFAKTDAERAAQTQAMIATLREFKRRYPEAKLILNRGFELFPDVAPLTYA 220 FFLDTLDSYQL AK DA RAAQ M+ +R K RYPEAKLI NRGFE+ P V L YA Sbjct: 168 FFLDTLDSYQLVAKDDAARAAQEAGMVRVIRAIKARYPEAKLIFNRGFEILPQVHDLAYA 227 Query: 221 VAAESLYRGYDAGRRSYGAVTDNDRAWLSGQLRTIRDRYRLPAIAIDYVDPFQPGARALA 280 VA ESLYR +D G + Y V D DRAWL GQ R I+D Y LP I+IDY P RA A Sbjct: 228 VAFESLYRAWDQGNKQYREVNDADRAWLMGQARKIQDEYHLPVISIDYC---PPADRACA 284 Query: 281 RETAKKISADGFLPWVADGTLMSMGVSSVELVPRNVLVLLDVAQGDDLHTTEAQRFLGIQ 340 RETAK+I A G +P+V D L ++GV +E++PR VL+L D A G D+ T+E RFL + Sbjct: 285 RETAKRIKAQGLIPYVTDPALSTIGVGRIEVLPRKVLILQDRAPGTDIDTSEGVRFLAMP 344 Query: 341 LNHLGLRYEFREVGREGLPTEPLAGRYAGVVTWFRSGTDHQ--RLGPWIGQRIKEGVPVA 398 LN LG ++ ++ + LP + RYAGVV W SG Q L W+ QRI +GV +A Sbjct: 345 LNFLGYDVDYADLNQP-LPADVPPDRYAGVVVWVNSGPVRQAAALASWVRQRIHDGVRIA 403 Query: 399 IFNAFGFQMTKLSAGMLGLTSFSAPAPEQLEVTQADSELMGFETKPRVDRTQLELVRLTD 458 N G MLGL A L V D ++GFE PR DR + +R+ Sbjct: 404 FMNELGLPADGSVTDMLGLQLVHGHATGPLSVVSQD-RIVGFEMAPRPDRRAAQPIRV-G 461 Query: 459 PAAKSLLRMKDGRNNIYDAAAIMPWGGFALAPFATTTLQVMDPPRWVLQPMLFLKRALRL 518 +SLLR+K G +DAAAI WGG+ L P+A +L ++ RWV++P+ FL+RAL L Sbjct: 462 ADGQSLLRLKSGDFE-FDAAAITAWGGYVLNPYAVFSLGTIEQSRWVIRPLEFLRRALAL 520 Query: 519 PAIPVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQREIWDRYRFPVTVSVVE 578 P +PVPDVTTE GRR+ H+DGDGF S+AE+PG ++ EVL +E+W+RY P T+SV+E Sbjct: 521 PDMPVPDVTTENGRRLMMVHVDGDGFASRAEFPGPEYSGEVLMKEVWERYGIPTTLSVIE 580 Query: 579 GELSPQGVYPQLSAQTTALARKMFTLPYVEPASHSFSHPFNWADAMYDTRTADINQMDGD 638 GE+ P G+YP+L+ + A+ARKMF LPYVE +H++SHPF W + D GD Sbjct: 581 GEVGPSGLYPKLTPRLEAIARKMFALPYVELGTHTYSHPFKWGRTLPGAPAKD-QGGGGD 639 Query: 639 ASRTLDIPNYKFNLQREIKGSMDYINKTLLPPGKKAEVFLWTGNCVPPPEAIAQTYLDGF 698 A+ L IP Y+FNL+REI GS+ YIN L PP K+ ++ W+G+C PP A+ + G Sbjct: 640 AAFALTIPGYQFNLEREIGGSIRYINARLAPPDKRVKIIQWSGDCRPPELAVRMAWDAGV 699 Query: 699 LNMNGGDTMITRSRNTWTDIAAQGVRK-QGWYQVFAPNQDENVYTGNWTGPFYGFERAIE 757 +N+NGGDT ITRS +WT+IAA G+ K G YQVFAPNQ+ENVYT +WTGP+YGF+R IE Sbjct: 700 VNINGGDTTITRSSPSWTEIAALGIDKGPGAYQVFAPNQNENVYTNDWTGPYYGFDRLIE 759 Query: 758 SYELTGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAEAQPFTRLYVSQYIRKVIDFE 817 + ++T P RFK +++YYH Y+GTK ASV AL ++ +A +QP +Y ++Y+ KV+DF Sbjct: 760 TLQMTDTPYRFKPINLYYHMYSGTKLASVKALKTVYDYALSQPVLPVYATEYVAKVLDFR 819 Query: 818 NTSIARTADGTLVYRTGEYLRTLRIPADAPDVDLSQPGIAGIAPGPSGRY--LITSAAEV 875 + ++AR + +V G+ LR LR A G+AG G Y L AA Sbjct: 820 DMAVARDGEAWIVRGNGD-LRELRWMAPGTPHLADARGVAGYGKAAGGIYIHLDGGAARF 878 Query: 876 RLKPPAQPAAPALPMLLEAGGQVGDFQGSVNGNQVELRFSLLANGPSTFSVAGARSCSAS 935 + AQ A P P L EA V Q S NG + F +A A +CS Sbjct: 879 AMSTDAQTAQP--PYLAEAAAFVQRLQRSGNG----MSFDAGGYYKPFVRLANAGACSIQ 932 Query: 936 ADGAALATGKS 946 DG T ++ Sbjct: 933 VDGRPARTARA 943 >emb|CCA84624.1| putative polysaccharide transport system component signal peptide protein (ragA) [Ralstonia syzygii R24] Length = 934 Score = 755 bits (1949), Expect = 0.0, Method: Composition-based stats. Identities = 429/921 (46%), Positives = 564/921 (61%), Gaps = 27/921 (2%) Query: 31 AAAALLTGSAPAQGTAATAPAPTSAAFYYGVNPPLADLQAFDVAVVEPAFVRNPAARTRA 90 A A GS P Q TAA AP + A++YG P+A L+AFD VVEP +P+ Sbjct: 10 APGAAGEGSPPVQTTAAEAP---NIAWFYGDKLPVAQLRAFDAVVVEPDHGFDPSR---- 62 Query: 91 AADGMHQLFAYVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQTAPGWRDFFLDKIV 150 A Q FAYVS+GE+ P R +YK+LP L G NAAW SRVIDQ+ P W F++D ++ Sbjct: 63 AKTPTTQWFAYVSVGEIAPERRWYKELPKAWLAGSNAAWASRVIDQSQPQWPAFYVDHVI 122 Query: 151 APLWAQGWRGFFLDTLDSYQLFAKTDAERAAQTQAMIATLREFKRRYPEAKLILNRGFEL 210 APLW +G+RGFFLDTLDSYQL AK DA RAAQ M+ +R K RYPEAKLI NRGFE+ Sbjct: 123 APLWDKGYRGFFLDTLDSYQLVAKDDAARAAQEAGMVRVIRAIKARYPEAKLIFNRGFEI 182 Query: 211 FPDVAPLTYAVAAESLYRGYDAGRRSYGAVTDNDRAWLSGQLRTIRDRYRLPAIAIDYVD 270 P V L YAVA ESLYRG+D GR+ Y V D DRAWL GQ R IRD YRLP I+IDY Sbjct: 183 LPQVHDLAYAVAFESLYRGWDQGRKQYREVNDADRAWLMGQARKIRDEYRLPVISIDYC- 241 Query: 271 PFQPGARALARETAKKISADGFLPWVADGTLMSMGVSSVELVPRNVLVLLDVAQGDDLHT 330 P RA AR+TAK+I A G +P+V D L ++GV +E++PR VL+L D+ D+ T Sbjct: 242 --PPADRACARDTAKRIKAQGLIPYVTDPALSTIGVGRIEVLPRKVLILQDLTPNTDIDT 299 Query: 331 TEAQRFLGIQLNHLGLRYEFREVGREGLPTEPLAGRYAGVVTWFRSGTDHQ--RLGPWIG 388 +E RFL + LN LG E+ ++ + LP E RYAGVV W SG Q L W+ Sbjct: 300 SEGVRFLAMPLNFLGYDVEYADLSQP-LPAEVPPDRYAGVVVWVNSGPVRQVAALSSWVR 358 Query: 389 QRIKEGVPVAIFNAFGFQMTKLSAGMLGLTSFSAPAPEQLEVTQADSELMGFETKPRVDR 448 QRI++GV +A N G +LGL A L V D ++GFE PR DR Sbjct: 359 QRIRDGVRIAFMNELGLPADGSVTDLLGLQLVRGRATGPLSVVSQD-RIVGFEMAPRPDR 417 Query: 449 TQLELVRLTDPAAKSLLRMKDGRNNIYDAAAIMPWGGFALAPFATTTLQVMDPPRWVLQP 508 + +R+ +SLLR+K G +DAAAI WGG+ L+P+A +L ++ RWV+QP Sbjct: 418 RAAQPIRV-GANGQSLLRLKSGDFE-FDAAAITEWGGYVLSPYAVFSLGTIEQSRWVIQP 475 Query: 509 MLFLKRALRLPAIPVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQREIWDRY 568 + FL+RAL LP +PVPDVT+E GRR+ H+DGDGF S+AE+PG ++ EVL +E+W+RY Sbjct: 476 LEFLRRALALPDMPVPDVTSENGRRLMLVHVDGDGFASRAEFPGPEYSGEVLMQEVWERY 535 Query: 569 RFPVTVSVVEGELSPQGVYPQLSAQTTALARKMFTLPYVEPASHSFSHPFNWADAMYDTR 628 P T+SV+EGE+ P G+YP+L+ + A+ARKMF LPYVE +H++SHPF W M Sbjct: 536 GIPTTLSVIEGEVGPSGLYPKLTPRLEAVARKMFALPYVELGTHTYSHPFKWGRTMPGVP 595 Query: 629 TADINQMDGDASRTLDIPNYKFNLQREIKGSMDYINKTLLPPGKKAEVFLWTGNCVPPPE 688 T GD + L IP YKF+L+REI GS+ YIN L P GK+ + W+G+C PP Sbjct: 596 T-KAEGGGGDTAFALTIPGYKFSLEREIGGSIRYINARLAPLGKRVRIVQWSGDCRPPEL 654 Query: 689 AIAQTYLDGFLNMNGGDTMITRSRNTWTDIAAQGVRK-QGWYQVFAPNQDENVYTGNWTG 747 A+ + G +N+NGGDT ITRS +WT+IA G+ K G YQ+FAPNQ+ENVYT +WTG Sbjct: 655 AVRMAWDAGVVNINGGDTTITRSSPSWTEIAPLGIDKGPGAYQIFAPNQNENVYTNDWTG 714 Query: 748 PFYGFERAIESYELTGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAEAQPFTRLYVS 807 P+YGF+R +E+ ++T P RFK ++IYYH Y+GTK AS+ AL K++ +A +QP +Y + Sbjct: 715 PYYGFDRLVETLQMTDTPYRFKPINIYYHMYSGTKLASLKALKKVYDYALSQPVLPVYAT 774 Query: 808 QYIRKVIDFENTSIARTADGTLVYRTGEYLRTLRIPADAPDVDLSQPGIAGIAPGPSGRY 867 +Y+ KV+DF + +IAR D +V G+ LR LR A G+AG G Y Sbjct: 775 EYVAKVLDFRDMAIARDGDAWVVRGNGD-LRELRWMAPGSPRLADALGVAGYGKAAGGIY 833 Query: 868 --LITSAAEVRLKPPAQPAAPALPMLLEAGGQVGDFQGSVNGNQVELRFSLLANGPSTFS 925 L AA + AQ A PA L EA V + NG + F Sbjct: 834 IHLDGGAARFAVSTDAQAAQPA--YLAEAAAFVQRLERRGNG----MSFDAGGYYKPFVR 887 Query: 926 VAGARSCSASADGAALATGKS 946 +A A +CS DG T ++ Sbjct: 888 LANAGACSIQVDGRPARTARA 908