BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5358.p (541 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777620.1| glycosyltransferase [Herbaspirillum seropedi... 956 0.0 ref|YP_586296.1| hypothetical protein Rmet_4160 [Cupriavidus met... 722 0.0 ref|YP_004682358.1| hypothetical protein CNE_2c21770 [Cupriavidu... 715 0.0 ref|YP_841711.1| lipopolysaccharide N-acetylglucosaminyl transfe... 712 0.0 ref|YP_002008606.1| glycosyl transferase [Cupriavidus taiwanensi... 710 0.0 >ref|YP_003777620.1| glycosyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ65712.1| glycosyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 543 Score = 956 bits (2470), Expect = 0.0, Method: Composition-based stats. Identities = 467/535 (87%), Positives = 494/535 (92%), Gaps = 1/535 (0%) Query: 8 PVAGDAS-YQRRAKDCDVMLLLEGTFPYVSGGVSSWVNQIIRGFPEIRFGLCFIGSRPED 66 P DA YQRRA CDVMLLLEGTFPYVSGGVSSWVNQIIRGFP +RFGLCFIGSR +D Sbjct: 9 PAPADADRYQRRADSCDVMLLLEGTFPYVSGGVSSWVNQIIRGFPHLRFGLCFIGSRRQD 68 Query: 67 YGTPKYALPDNVVHLETHFIHEHLSATQVVRSRGDAAAFERIDELHAMFRAYDRTDATSH 126 YG PKYALPDNVVHLETH+IHE+LSATQVVRSRGDA AF +D+LH M RAYDR+D+TSH Sbjct: 69 YGAPKYALPDNVVHLETHYIHENLSATQVVRSRGDAQAFAMMDQLHGMLRAYDRSDSTSH 128 Query: 127 SALVAQLGELIPMMEDGGKMDQDTFLFSKRSWDYLASQYRIFCTDPSFVDYFWTVRIMHQ 186 SAL AQL ELIPMM DGGK+DQD FLFSK+SWDYL +QYR FCTDPSFVDYFWTVRIMHQ Sbjct: 129 SALAAQLAELIPMMADGGKLDQDAFLFSKQSWDYLTAQYRTFCTDPSFVDYFWTVRIMHQ 188 Query: 187 PVWTLARVARQLIPARCYHTISTGYAGFLGALMKMQTGRPLILSEHGIYTKERKIDLFQS 246 PVWTLARVARQLIPARCYHT+STGYAGFLG+LMKMQTGRPLILSEHGIYTKERKIDLFQS Sbjct: 189 PVWTLARVARQLIPARCYHTVSTGYAGFLGSLMKMQTGRPLILSEHGIYTKERKIDLFQS 248 Query: 247 EWIRDNRNVFEKDASQIPYFREMWIRFFEALGRLCYQASNDIVALYETNRLRQIHDGAPA 306 EWIRDNRNVFEKDASQIPYFREMWIRFFEALGR+CYQASN IVALYETNRLRQ+ DGAP Sbjct: 249 EWIRDNRNVFEKDASQIPYFREMWIRFFEALGRMCYQASNQIVALYETNRLRQVIDGAPP 308 Query: 307 ERTRNIPNGIDLPRLSKLRALRSENIPPVLCLLGRVVPIKDVKTFIRAMRTVVNQYPEAE 366 ERTRNIPNGIDLPRLS LRA RSE IPPVLCLLGRVVPIKDVKTFIRAMRTVVNQYPEAE Sbjct: 309 ERTRNIPNGIDLPRLSALRAQRSEKIPPVLCLLGRVVPIKDVKTFIRAMRTVVNQYPEAE 368 Query: 367 AWIAGPEDEDPAYAGECHAIADGLGLTDKVKFLGFQKIDELMPKIGLVVLSSISEALPLV 426 AWIAGPEDEDP+YA ECHAIA+GLGL DKVKFLG+QKIDELMPKIGLVVLSSISEALPLV Sbjct: 369 AWIAGPEDEDPSYAAECHAIAEGLGLLDKVKFLGYQKIDELMPKIGLVVLSSISEALPLV 428 Query: 427 LLEGFAAGVPAVATDVGSCRQLLYGLSEEDQALGAAGDVVGIAQPQALADAALKLLTDPQ 486 LLEGFAAGVP VATDVGSCRQL+YGLSEEDQALGAAGDVVGIA+PQALA AALKLLTDPQ Sbjct: 429 LLEGFAAGVPGVATDVGSCRQLIYGLSEEDQALGAAGDVVGIAEPQALAQAALKLLTDPQ 488 Query: 487 RWHAAQAAGIARVERYYTQDMMFGAYRELYQRSLAQGGPDSDAASGQPLRCPVRH 541 RW+AAQAAGIARVERYYTQ+MMFGAYRELY +LA+ G + A+ LRCPV+H Sbjct: 489 RWYAAQAAGIARVERYYTQEMMFGAYRELYDNALAEQGAAATGAAATALRCPVQH 543 >ref|YP_586296.1| hypothetical protein Rmet_4160 [Cupriavidus metallidurans CH34] gb|ABF11027.1| Conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 529 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 349/523 (66%), Positives = 414/523 (79%), Gaps = 6/523 (1%) Query: 18 RAKDCDVMLLLEGTFPYVSGGVSSWVNQIIRGFPEIRFGLCFIGSRPEDYGTPKYALPDN 77 + DVMLLLEGTFPYVSGGVSSWVNQ+IR FP+IRFG+ FIGSR +DYG YALPDN Sbjct: 7 KGTSADVMLLLEGTFPYVSGGVSSWVNQMIRAFPDIRFGIVFIGSRRQDYGEMAYALPDN 66 Query: 78 VVHLETHFIHEHLSATQVVRSRGDAAAFERIDELHAMFRAYDRTDATSHSALVAQLGELI 137 VVHLETHF+++ V ++GDA AF+R DELH M R R + EL+ Sbjct: 67 VVHLETHFLYDFAPPPMVHGTKGDAHAFDRSDELHEMLRQRGREVEAGD-----LIRELM 121 Query: 138 PMMEDGGKMDQDTFLFSKRSWDYLASQYRIFCTDPSFVDYFWTVRIMHQPVWTLARVARQ 197 P + +GG + +D FL+SKR+WD + QYR +CTDPSF DYFWTVRIMH+P+W L R+ Sbjct: 122 PALGEGGALSEDAFLYSKRAWDTITDQYRRYCTDPSFTDYFWTVRIMHKPLWQLVRIVDG 181 Query: 198 LIPARCYHTISTGYAGFLGALMKMQTGRPLILSEHGIYTKERKIDLFQSEWIRDNRNVFE 257 LIPA+ YHT+STGYAGFLGA+++ +TGRPL++SEHGIYTKERKIDLFQS+WIRDNRN+FE Sbjct: 182 LIPAKVYHTVSTGYAGFLGAMLRHRTGRPLLVSEHGIYTKERKIDLFQSQWIRDNRNIFE 241 Query: 258 KDASQIPYFREMWIRFFEALGRLCYQASNDIVALYETNRLRQIHDGAPAERTRNIPNGID 317 +D SQI YFRE+W+RFFE LGR+CY+A ++I ALYE NR RQ+ DGAPAERT NIPNGI+ Sbjct: 242 RDISQISYFRELWVRFFETLGRVCYEAGDEITALYEGNRSRQVLDGAPAERTHNIPNGIN 301 Query: 318 LPRLSKLRALRSENIPPVLCLLGRVVPIKDVKTFIRAMRTVVNQYPEAEAWIAGPEDEDP 377 LPRLS LR R+ +PPVLCL+GRVVPIKD+KTFIRAM TVV +YP+AE WIAGPEDEDP Sbjct: 302 LPRLSALRERRAPGVPPVLCLIGRVVPIKDIKTFIRAMLTVVREYPDAEGWIAGPEDEDP 361 Query: 378 AYAGECHAIADGLGLTDKVKFLGFQKIDELMPKIGLVVLSSISEALPLVLLEGFAAGVPA 437 YA EC ++A+ LGL KVKFLGFQKIDEL+PK+G++VLSSISEALPLV+LEGFAAGVP Sbjct: 362 DYATECRSLAESLGLGGKVKFLGFQKIDELLPKVGVLVLSSISEALPLVVLEGFAAGVPC 421 Query: 438 VATDVGSCRQLLYGLSEEDQALGAAGDVVGIAQPQALADAALKLLTDPQRWHAAQAAGIA 497 V TDVGSC QL++GL ED ALG AGDVV IA P ALADAALKL+ +P RW AAQAAGIA Sbjct: 422 VTTDVGSCSQLVFGLPGEDAALGTAGDVVRIADPAALADAALKLIKEPARWQAAQAAGIA 481 Query: 498 RVERYYTQDMMFGAYRELYQRSLAQGGPDSDAASG-QPLRCPV 539 RVERYYTQ+ M G+YR LY +A A G P +CPV Sbjct: 482 RVERYYTQEQMVGSYRTLYASMMAMPDNTHHARGGASPAKCPV 524 >ref|YP_004682358.1| hypothetical protein CNE_2c21770 [Cupriavidus necator N-1] gb|AEI81126.1| lipopolysaccharide N-acetylglucosaminyl transferase [Cupriavidus necator N-1] Length = 532 Score = 715 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 351/528 (66%), Positives = 414/528 (78%), Gaps = 12/528 (2%) Query: 18 RAKDCDVMLLLEGTFPYVSGGVSSWVNQIIRGFPEIRFGLCFIGSRPEDYGTPKYALPDN 77 + DVMLLLEGTFPYVSGGVSSWVNQ+IR FP++RFG+ FIGSR EDYG Y LP N Sbjct: 7 KGTSADVMLLLEGTFPYVSGGVSSWVNQMIRAFPDLRFGIVFIGSRREDYGDMAYQLPPN 66 Query: 78 VVHLETHFIHEHLSATQVVRSRGDAAAFERIDELHAMFRAYDRTDATSHSALVAQLGELI 137 VVHLETH++++ V S GDA AF+ D LH + R D + A + EL+ Sbjct: 67 VVHLETHYLYDFPPPPLVQGSTGDARAFDASDRLHELLR-----DPGREAEAGAMIRELM 121 Query: 138 PMMEDGGKMDQDTFLFSKRSWDYLASQYRIFCTDPSFVDYFWTVRIMHQPVWTLARVARQ 197 P + +GG + +D FL+S+R+W + QYR FCTDPSF DYFWTVRIMH+P+W L R+A Sbjct: 122 PTLREGGALGEDAFLYSRRAWQTITEQYRRFCTDPSFTDYFWTVRIMHKPLWQLVRIADN 181 Query: 198 LIPARCYHTISTGYAGFLGALMKMQTGRPLILSEHGIYTKERKIDLFQSEWIRDNRNVFE 257 LIPAR YHT+STGYAGFLGAL++ + RPL++SEHGIYTKERKIDLFQS+WIRDNRNVFE Sbjct: 182 LIPARVYHTVSTGYAGFLGALLRHRNQRPLLVSEHGIYTKERKIDLFQSQWIRDNRNVFE 241 Query: 258 KDASQIPYFREMWIRFFEALGRLCYQASNDIVALYETNRLRQIHDGAPAERTRNIPNGID 317 +D SQI YFRE+W+RFFE +GR+CY A +DIVALYE NR RQ+ DGAP RTR+IPNGID Sbjct: 242 RDISQISYFRELWVRFFETIGRVCYDAGDDIVALYEGNRRRQVQDGAPEARTRSIPNGID 301 Query: 318 LPRLSKLRALRSENIPPVLCLLGRVVPIKDVKTFIRAMRTVVNQYPEAEAWIAGPEDEDP 377 LPRL+ LRA R +PPVLCL+GRVVPIKDVKTFIRAM TVV +YP+AE WIAGPEDEDP Sbjct: 302 LPRLAPLRARRKPGVPPVLCLIGRVVPIKDVKTFIRAMLTVVREYPDAEGWIAGPEDEDP 361 Query: 378 AYAGECHAIADGLGLTDKVKFLGFQKIDELMPKIGLVVLSSISEALPLVLLEGFAAGVPA 437 YA EC ++A+ LGL KVKFLGFQ+ID L+P++G++VLSSISEALPLV+LEGFAAGVP Sbjct: 362 DYARECRSLAESLGLGQKVKFLGFQRIDALLPQVGVLVLSSISEALPLVVLEGFAAGVPC 421 Query: 438 VATDVGSCRQLLYGLSEEDQALGAAGDVVGIAQPQALADAALKLLTDPQRWHAAQAAGIA 497 V TDVGSCR+LL+GL ED ALG+AG+VV IA P ALA AAL LL DP RW AAQAAG+A Sbjct: 422 VTTDVGSCRELLFGLPGEDAALGSAGEVVRIADPAALAAAALGLLQDPARWQAAQAAGVA 481 Query: 498 RVERYYTQDMMFGAYRELYQRSLAQ------GGPDSDAASGQPLRCPV 539 RVERYYTQD M G+YRELYQR +AQ GGP+ G P RCPV Sbjct: 482 RVERYYTQDRMVGSYRELYQRLMAQPDGAGHGGPERQGG-GNPARCPV 528 >ref|YP_841711.1| lipopolysaccharide N-acetylglucosaminyl transferase [Ralstonia eutropha H16] emb|CAJ96981.1| Lipopolysaccharide N-acetylglucosaminyl transferase [Ralstonia eutropha H16] Length = 532 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 349/527 (66%), Positives = 412/527 (78%), Gaps = 10/527 (1%) Query: 18 RAKDCDVMLLLEGTFPYVSGGVSSWVNQIIRGFPEIRFGLCFIGSRPEDYGTPKYALPDN 77 +A DVMLLLEGTFPYVSGGVSSWVNQ+IR FP++RFG+ FIGSR EDYG Y LP N Sbjct: 7 KATSADVMLLLEGTFPYVSGGVSSWVNQMIRAFPDLRFGIVFIGSRREDYGDMAYQLPPN 66 Query: 78 VVHLETHFIHEHLSATQVVRSRGDAAAFERIDELHAMFRAYDRTDATSHSALVAQLGELI 137 VVHLETH++++ V S GDA AF+ D LH + R D + A + EL+ Sbjct: 67 VVHLETHYLYDFPPPPLVQGSTGDAKAFDASDRLHELLR-----DPGREAEAGAMMRELM 121 Query: 138 PMMEDGGKMDQDTFLFSKRSWDYLASQYRIFCTDPSFVDYFWTVRIMHQPVWTLARVARQ 197 P + +GG + +D FL+S+R+W + QYR FCTDPSF DYFWTVRIMH+P+W L R+A Sbjct: 122 PALREGGALGEDAFLYSRRAWQTITEQYRRFCTDPSFTDYFWTVRIMHKPLWQLVRIADN 181 Query: 198 LIPARCYHTISTGYAGFLGALMKMQTGRPLILSEHGIYTKERKIDLFQSEWIRDNRNVFE 257 LIPAR YHT+STGYAGFLGAL++ + RPL++SEHGIYTKERKIDLFQS+WIRDNRNVFE Sbjct: 182 LIPARVYHTVSTGYAGFLGALLRHRNQRPLLVSEHGIYTKERKIDLFQSQWIRDNRNVFE 241 Query: 258 KDASQIPYFREMWIRFFEALGRLCYQASNDIVALYETNRLRQIHDGAPAERTRNIPNGID 317 +D SQI YFRE+W+RFFE +GR+CY A +DIVALYE NR RQ+ DGAP RTR+IPNGID Sbjct: 242 RDISQISYFRELWVRFFETIGRVCYDAGDDIVALYEGNRRRQVQDGAPEVRTRSIPNGID 301 Query: 318 LPRLSKLRALRSENIPPVLCLLGRVVPIKDVKTFIRAMRTVVNQYPEAEAWIAGPEDEDP 377 LPRL+ LRA R +PPVLCL+GRVVPIKDVKTFIRAM TVV +YP+AE WIAGPEDEDP Sbjct: 302 LPRLAPLRARRKPGVPPVLCLIGRVVPIKDVKTFIRAMLTVVREYPDAEGWIAGPEDEDP 361 Query: 378 AYAGECHAIADGLGLTDKVKFLGFQKIDELMPKIGLVVLSSISEALPLVLLEGFAAGVPA 437 YA EC ++A+ LGL KVKFLGFQ+ID L+P++G++VLSSISEALPLV+LEGFAAGVP Sbjct: 362 DYARECRSLAESLGLGQKVKFLGFQRIDALLPQVGVLVLSSISEALPLVVLEGFAAGVPC 421 Query: 438 VATDVGSCRQLLYGLSEEDQALGAAGDVVGIAQPQALADAALKLLTDPQRWHAAQAAGIA 497 V TDVGSCR+LL+GL +D ALG+AG+VV IA P ALA AAL LL DP RW AAQAAG+A Sbjct: 422 VTTDVGSCRELLFGLPGDDAALGSAGEVVRIADPAALAAAALGLLRDPARWQAAQAAGVA 481 Query: 498 RVERYYTQDMMFGAYRELYQRSLAQG-----GPDSDAASGQPLRCPV 539 RVERYYTQD M G+YRELYQR +AQ G G P RCPV Sbjct: 482 RVERYYTQDRMVGSYRELYQRLMAQADGAGHGEPERQGGGNPARCPV 528 >ref|YP_002008606.1| glycosyl transferase [Cupriavidus taiwanensis LMG 19424] emb|CAQ72554.1| putative GLYCOSYL TRANSFERASE [Cupriavidus taiwanensis LMG 19424] Length = 531 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 353/526 (67%), Positives = 411/526 (78%), Gaps = 9/526 (1%) Query: 18 RAKDCDVMLLLEGTFPYVSGGVSSWVNQIIRGFPEIRFGLCFIGSRPEDYGTPKYALPDN 77 +A DVMLLLEGTFPYVSGGVSSWVNQ+IR FPE+RFG+ FIGSR EDYG Y LP N Sbjct: 7 KAASADVMLLLEGTFPYVSGGVSSWVNQMIRAFPELRFGIVFIGSRREDYGDMAYQLPVN 66 Query: 78 VVHLETHFIHEHLSATQVVRSRGDAAAFERIDELHAMFRAYDRTDATSHSALVAQLGELI 137 VVHLETH++++ V GDA AF+ D LH + R R A + EL+ Sbjct: 67 VVHLETHYLYDFPPPPLVQGRSGDAKAFDAADRLHDLLREPGREAEAG-----AMIRELM 121 Query: 138 PMMEDGGKMDQDTFLFSKRSWDYLASQYRIFCTDPSFVDYFWTVRIMHQPVWTLARVARQ 197 P + +GG + +D FL+S+R+W + QYR FCTDPSF DYFWTVRIMH+P+W L R+A Sbjct: 122 PALREGGALGEDAFLYSRRAWQTITDQYRRFCTDPSFTDYFWTVRIMHKPLWQLVRIADG 181 Query: 198 LIPARCYHTISTGYAGFLGALMKMQTGRPLILSEHGIYTKERKIDLFQSEWIRDNRNVFE 257 LIPAR YHT+STGYAGFLGAL++ + RPL++SEHGIYTKERKIDLFQS+WIRDNRNVFE Sbjct: 182 LIPARVYHTVSTGYAGFLGALLRHRNQRPLLVSEHGIYTKERKIDLFQSQWIRDNRNVFE 241 Query: 258 KDASQIPYFREMWIRFFEALGRLCYQASNDIVALYETNRLRQIHDGAPAERTRNIPNGID 317 +D SQI YFRE+W+RFFE LGR+CY A +DIVALYE NR RQ+ DGAP RTR+IPNGID Sbjct: 242 RDISQISYFRELWVRFFETLGRVCYDAGDDIVALYEGNRRRQVQDGAPEARTRSIPNGID 301 Query: 318 LPRLSKLRALRSENIPPVLCLLGRVVPIKDVKTFIRAMRTVVNQYPEAEAWIAGPEDEDP 377 LPRL+ LRA R +PPVLCL+GRVVPIKDVKTFIRAM TVV +YPEAE WIAGPEDEDP Sbjct: 302 LPRLAPLRARRQPGVPPVLCLIGRVVPIKDVKTFIRAMLTVVREYPEAEGWIAGPEDEDP 361 Query: 378 AYAGECHAIADGLGLTDKVKFLGFQKIDELMPKIGLVVLSSISEALPLVLLEGFAAGVPA 437 YA EC ++A+ LGL KVKFLGFQ+ID L+P++G++VLSSISEALPLV+LEGFAAGVP Sbjct: 362 EYARECRSLAESLGLGKKVKFLGFQRIDALLPQVGVLVLSSISEALPLVVLEGFAAGVPC 421 Query: 438 VATDVGSCRQLLYGLSEEDQALGAAGDVVGIAQPQALADAALKLLTDPQRWHAAQAAGIA 497 V TDVGSCR+LL+GL ED ALG AG+VV IA P ALA AAL LL DP RW AAQAAG+A Sbjct: 422 VTTDVGSCRELLFGLPGEDAALGPAGEVVRIADPAALAAAALGLLRDPARWQAAQAAGVA 481 Query: 498 RVERYYTQDMMFGAYRELYQRSLAQ---GGPDSDAA-SGQPLRCPV 539 RVERYYTQ+ M G+YRELYQR +AQ G D A G P RCPV Sbjct: 482 RVERYYTQERMVGSYRELYQRLMAQPDGTGHDGPARHGGNPARCPV 527