BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5353.p (399 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777616.1| cyanate permease [Herbaspirillum seropedicae... 518 e-145 ref|YP_001473633.1| permease [Shewanella sediminis HAW-EB3] >gi|... 322 5e-86 ref|YP_001352737.1| major facilitator transporter [Janthinobacte... 321 2e-85 ref|YP_159140.1| hypothetical protein ebA3751 [Aromatoleum aroma... 318 2e-84 ref|ZP_06016251.1| inner membrane transporter YeaN [Klebsiella p... 287 2e-75 >ref|YP_003777616.1| cyanate permease [Herbaspirillum seropedicae SmR1] gb|ADJ65708.1| cyanate permease protein [Herbaspirillum seropedicae SmR1] Length = 401 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 350/395 (88%), Positives = 370/395 (93%) Query: 3 ATHPPHVRPLQRNVWLIAGILLIAANLRAPVTAVGPVMGLLQQTFALSAGAAGLMLTLPL 62 ATHP V P+ R++WLIAGILLIAANLRAPVTAVGPVMG+LQQTFALSAGAAGLMLTLPL Sbjct: 7 ATHPHGVSPVPRSLWLIAGILLIAANLRAPVTAVGPVMGVLQQTFALSAGAAGLMLTLPL 66 Query: 63 LCFALVSPLAARVARSLGLERTLLLALLLIAGGIVLRSSGSVAALLAGTCVIGCGIAGGN 122 LCFALVSPLAAR ARSLGLERTLLLALLLI GI+LRSSG+VA LLAGTC+IGCGIAGGN Sbjct: 67 LCFALVSPLAARTARSLGLERTLLLALLLIGAGILLRSSGTVAGLLAGTCIIGCGIAGGN 126 Query: 123 VLLPSLLKRDFPDDLTRMTAIYALTMGGASAFGSVCAVPLAAGLGWAWALASFIALPVVT 182 VLLPSLLKRDF DDLTRMTAIYALTM SA GSVCAVPLA LGWAWALA+FIALP+V Sbjct: 127 VLLPSLLKRDFADDLTRMTAIYALTMNSVSALGSVCAVPLATRLGWAWALAAFIALPLVA 186 Query: 183 VLVWLPQLRRDTRPATAPARAASMWRQPLAWQVTFFLGTNSLVYYVVTAWLPSILAANGH 242 +L WLPQL+RDTRPA PARAAS+WRQPLAWQVTFFLGTNSLVYYVVTAWLPSILAANG+ Sbjct: 187 MLAWLPQLQRDTRPANVPARAASIWRQPLAWQVTFFLGTNSLVYYVVTAWLPSILAANGY 246 Query: 243 SAVEAGNLHGLMQLASALPGLLLVPLGPRMRDHRPVAVSMSAATVLSLIGLIAWPQASII 302 SAV+AGNLHGLMQLASALPGLLLVPLGPR+RDHRPVAVSMSAATVLSL+GLIAWPQAS++ Sbjct: 247 SAVQAGNLHGLMQLASALPGLLLVPLGPRIRDHRPVAVSMSAATVLSLVGLIAWPQASLV 306 Query: 303 WVPLFGFGTGAVLILGLAFVGTRVSTPPQAAALSAMAQSVGYLLAAAGPIFMGRLHDASG 362 WVPLFGFGTGAVLILGLAFVGTRVSTPPQAAALSAMAQSVGYLLAA GPI MGRLHDA+G Sbjct: 307 WVPLFGFGTGAVLILGLAFVGTRVSTPPQAAALSAMAQSVGYLLAATGPIVMGRLHDANG 366 Query: 363 GWTLVLALCAGGAVLMGVLGWLAGRPGRVIGADTQ 397 GWT VLALCAGGAVLMG LGWLAGRPGRVIGA + Sbjct: 367 GWTPVLALCAGGAVLMGWLGWLAGRPGRVIGASAK 401 >ref|YP_001473633.1| permease [Shewanella sediminis HAW-EB3] gb|ABV36505.1| permease [Shewanella sediminis HAW-EB3] Length = 403 Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats. Identities = 201/375 (53%), Positives = 270/375 (72%), Gaps = 5/375 (1%) Query: 18 LIAGILLIAANLRAPVTAVGPVMGLLQQTFALSAGAAGLMLTLPLLCFALVSPLAARVAR 77 L+AGILL AANLRAP+T V P++ ++ ++ LS AGL+ TLPLL FA+VSP+A+ +A+ Sbjct: 10 LVAGILLFAANLRAPITGVAPLLSMISESLQLSTMQAGLLTTLPLLAFAIVSPIASYLAK 69 Query: 78 SLGLERTLLLALLLIAGGIVLRSSGSVAALLAGTCVIGCGIAGGNVLLPSLLKRDFPDDL 137 GLE +++ AL +IA GI++RSSGSV+AL GT +IGCGIA GNVLLPSLLKR+FP + Sbjct: 70 EYGLEPSIMGALSVIALGILIRSSGSVSALYLGTVIIGCGIAIGNVLLPSLLKRNFPARI 129 Query: 138 TRMTAIYALTMGGASAFGSVCAVPLAA--GLGWAWALASFIALPVVTVLVWLPQLRRDTR 195 TA+YALTMG SA S AVPLA G GWA ++ SFI +P++++ VWLPQ+R DT+ Sbjct: 130 ATFTAVYALTMGIGSAISSAVAVPLAEFDGNGWALSMGSFIVIPLLSMAVWLPQMRNDTQ 189 Query: 196 PAT---APARAASMWRQPLAWQVTFFLGTNSLVYYVVTAWLPSILAANGHSAVEAGNLHG 252 P +WR PLAWQVTFFLG NS + Y++ WLP+IL G+SA +AG +HG Sbjct: 190 PTEDTRGLPHGGKVWRSPLAWQVTFFLGLNSFISYIIIGWLPTILIDAGYSASQAGAMHG 249 Query: 253 LMQLASALPGLLLVPLGPRMRDHRPVAVSMSAATVLSLIGLIAWPQASIIWVPLFGFGTG 312 L+QL++A+PGLLL+PL RM+D R +A +S A++L ++GL+ +P+ +++W +FGFG G Sbjct: 250 LLQLSTAIPGLLLIPLLARMKDQRGLAFGVSVASMLGILGLLYFPELAMLWTLIFGFGAG 309 Query: 313 AVLILGLAFVGTRVSTPPQAAALSAMAQSVGYLLAAAGPIFMGRLHDASGGWTLVLALCA 372 A LILGL+F+ R +P QAAALS M+QSVGYLLAA GP +G ++ A+ W L LCA Sbjct: 310 AGLILGLSFISLRTDSPHQAAALSGMSQSVGYLLAAMGPALVGSIYSATNSWVTPLVLCA 369 Query: 373 GGAVLMGVLGWLAGR 387 G L V G AGR Sbjct: 370 SGCGLCAVFGLFAGR 384 >ref|YP_001352737.1| major facilitator transporter [Janthinobacterium sp. Marseille] gb|ABR88789.1| transporter of the MFS superfamily [Janthinobacterium sp. Marseille] Length = 403 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 205/375 (54%), Positives = 262/375 (69%), Gaps = 5/375 (1%) Query: 18 LIAGILLIAANLRAPVTAVGPVMGLLQQTFALSAGAAGLMLTLPLLCFALVSPLAARVAR 77 L+ GILLIA NLR P T+V P++ ++ LS+ AAGL++TLPLL FA VSP + +A+ Sbjct: 21 LLFGILLIAMNLRVPFTSVAPLIDSIRTGLDLSSSAAGLLITLPLLAFAAVSPFGSLLAK 80 Query: 78 SLGLERTLLLALLLIAGGIVLRSSGSVAALLAGTCVIGCGIAGGNVLLPSLLKRDFPDDL 137 G+ER+LL ALL+I GI+LRS+GS A L GT +IG GIA GNVLLP LLKR FP + Sbjct: 81 KFGIERSLLAALLVIIAGILLRSAGSAATLYVGTAIIGGGIAIGNVLLPGLLKRSFPQQI 140 Query: 138 TRMTAIYALTMGGASAFGSVCAVPLA--AGLGWAWALASFIALPVVTVLVWLPQLRRDTR 195 T+ TAIY LTMG ASA GSV A+PLA + GW +A+A+ LP+++ +WLPQLR+ T Sbjct: 141 TKFTAIYVLTMGVASAVGSVYAIPLAQLSDYGWRFAMAALAVLPLISAFIWLPQLRKHTE 200 Query: 196 ---PATAPARAASMWRQPLAWQVTFFLGTNSLVYYVVTAWLPSILAANGHSAVEAGNLHG 252 + P +A +W LAWQV+ FLG NSLVYY++T WLP++L G++A EAGNLHG Sbjct: 201 VKGSISTPPPSAPVWHSALAWQVSLFLGFNSLVYYIMTTWLPAMLTDAGYTATEAGNLHG 260 Query: 253 LMQLASALPGLLLVPLGPRMRDHRPVAVSMSAATVLSLIGLIAWPQASIIWVPLFGFGTG 312 LMQ A+A PGLL+VPL R +D R +A +S TVLS+IGL+ P ++ W LFGF G Sbjct: 261 LMQFAAATPGLLIVPLVSRFKDQRGIAFGVSIITVLSIIGLMLAPGFAVFWTCLFGFSAG 320 Query: 313 AVLILGLAFVGTRVSTPPQAAALSAMAQSVGYLLAAAGPIFMGRLHDASGGWTLVLALCA 372 A LILGL+FV R + QAAALS MAQ +GY LAA GP +GR+HDA G W L +CA Sbjct: 321 ATLILGLSFVSLRAANTLQAAALSGMAQCIGYTLAAIGPTLIGRIHDAQGNWNATLLICA 380 Query: 373 GGAVLMGVLGWLAGR 387 G A +M +LG AGR Sbjct: 381 GAAFMMALLGLFAGR 395 >ref|YP_159140.1| hypothetical protein ebA3751 [Aromatoleum aromaticum EbN1] emb|CAI08239.1| conserved hypothetical transport protein,predicted major facilitator superfamily [Aromatoleum aromaticum EbN1] Length = 447 Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats. Identities = 205/391 (52%), Positives = 261/391 (66%), Gaps = 5/391 (1%) Query: 5 HPPHVRPLQRNVWLIAGILLIAANLRAPVTAVGPVMGLLQQTFALSAGAAGLMLTLPLLC 64 HP +P + + LI GILLIAANLRAPVT VGPV+ +Q +F +A AG++ TLPLL Sbjct: 39 HPSVTQPAAQGL-LIVGILLIAANLRAPVTGVGPVLADIQHSFGFNATQAGVLATLPLLA 97 Query: 65 FALVSPLAARVARSLGLERTLLLALLLIAGGIVLRSSGSVAALLAGTCVIGCGIAGGNVL 124 FALVSPLAA VAR GLERTL ALL++ GIV+RSS +V L GT ++G IA NVL Sbjct: 98 FALVSPLAAGVARRHGLERTLFGALLMLTAGIVVRSSSTVWGLFGGTMILGSAIALCNVL 157 Query: 125 LPSLLKRDFPDDLTRMTAIYALTMGGASAFGSVCAVPLA--AGLGWAWALASFIALPVVT 182 LPSLLKRDF ++ MT++YA+TM +A S +PL + GW +AL + L + Sbjct: 158 LPSLLKRDFATKVSTMTSLYAVTMSVTAALCSAVMIPLTGMSSSGWTFALGIWAVLAAFS 217 Query: 183 VLVWLPQLRRDTRP--ATAPARAASMWRQPLAWQVTFFLGTNSLVYYVVTAWLPSILAAN 240 +VWLPQLRR TRP A A +WR PLAWQVT F+G NS VYYVV +WLP+IL N Sbjct: 218 AVVWLPQLRRATRPMQQAATTPAIPIWRSPLAWQVTAFMGLNSFVYYVVISWLPAILQQN 277 Query: 241 GHSAVEAGNLHGLMQLASALPGLLLVPLGPRMRDHRPVAVSMSAATVLSLIGLIAWPQAS 300 G+SA AG+LHGL+QLA+ +PG+L VPL R+ D R A + ++ L+G IA P S Sbjct: 278 GYSAASAGSLHGLLQLATVVPGVLAVPLIHRLTDQRAAAFLSAVLALVGLVGFIALPGWS 337 Query: 301 IIWVPLFGFGTGAVLILGLAFVGTRVSTPPQAAALSAMAQSVGYLLAAAGPIFMGRLHDA 360 ++W ++GFG+ A LIL L F+ R + QAAALS MAQ+VGYLLAA GP +G LHD Sbjct: 338 VVWCIVYGFGSSACLILALTFMSLRAGSVHQAAALSGMAQAVGYLLAAVGPTLVGALHDL 397 Query: 361 SGGWTLVLALCAGGAVLMGVLGWLAGRPGRV 391 GGW+ L LCA + + V G AGRP ++ Sbjct: 398 FGGWSAALLLCATISAIQAVFGLYAGRPTQI 428 >ref|ZP_06016251.1| inner membrane transporter YeaN [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gb|EEW40634.1| inner membrane transporter YeaN [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 394 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 204/379 (53%), Positives = 251/379 (66%), Gaps = 4/379 (1%) Query: 13 QRNVWLIAGILLIAANLRAPVTAVGPVMGLLQQTFALSAGAAGLMLTLPLLCFALVSPLA 72 +R LIAGILLIA LR T P++ ++ + L+ GL+ TLPLL F LVSPLA Sbjct: 10 RRPALLIAGILLIATTLRVVFTGAAPLLDAIRSDYGLTTAQTGLLTTLPLLAFGLVSPLA 69 Query: 73 ARVARSLGLERTLLLALLLIAGGIVLRSSGSVAALLAGTCVIGCGIAGGNVLLPSLLKRD 132 A VAR G+ER+LLLA+LLI GI LRS S A L GT VIGCGIA GNVLLP L+KRD Sbjct: 70 AGVARRFGMERSLLLAMLLICAGITLRSLPSAALLFIGTAVIGCGIALGNVLLPGLIKRD 129 Query: 133 FPDDLTRMTAIYALTMGGASAFGSVCAVPLA-AGLGWAWALASFIALPVVTVLVWLPQLR 191 F + RMT Y+LTMGGA+A GS VP+A AG GW AL + P++ +L WLPQ R Sbjct: 130 FSQHVARMTGAYSLTMGGAAALGSALVVPVAMAGFGWRGALLLLMVFPLLALLSWLPQSR 189 Query: 192 RDTRPATAPARAA---SMWRQPLAWQVTFFLGTNSLVYYVVTAWLPSILAANGHSAVEAG 248 R + A +WR LAWQVT FLG NSLVYYV+ WLPSIL + G+S +AG Sbjct: 190 RRAETPLTGSGAMHNRGIWRSALAWQVTLFLGINSLVYYVIIGWLPSILQSMGYSEAQAG 249 Query: 249 NLHGLMQLASALPGLLLVPLGPRMRDHRPVAVSMSAATVLSLIGLIAWPQASIIWVPLFG 308 +LHGL QLA+A PGL + + R+RD R +AV ++ +S GL P+ +I W LFG Sbjct: 250 SLHGLRQLATAAPGLAIPLILHRLRDQRGIAVLVALMCAISAAGLCLLPELAIGWTLLFG 309 Query: 309 FGTGAVLILGLAFVGTRVSTPPQAAALSAMAQSVGYLLAAAGPIFMGRLHDASGGWTLVL 368 FG+GA +ILGL F+G R S+ QAAALS MAQSVGYLLAA GP MGR+HDA+G W + L Sbjct: 310 FGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGRIHDANGDWHIPL 369 Query: 369 ALCAGGAVLMGVLGWLAGR 387 A +++M V G LAGR Sbjct: 370 LAVALISLVMAVCGALAGR 388