BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5352.p (221 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777615.1| hypothetical protein Hsero_4238 [Herbaspiril... 277 9e-73 ref|YP_935206.1| hypothetical protein azo3704 [Azoarcus sp. BH72... 206 2e-51 ref|ZP_01451101.1| hypothetical protein SPV1_04373 [Mariprofundu... 150 1e-34 ref|YP_002481380.1| hypothetical protein Cyan7425_0631 [Cyanothe... 146 2e-33 ref|ZP_03698501.1| conserved hypothetical membrane protein [Luti... 137 1e-30 >ref|YP_003777615.1| hypothetical protein Hsero_4238 [Herbaspirillum seropedicae SmR1] gb|ADJ65707.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 227 Score = 277 bits (708), Expect = 9e-73, Method: Composition-based stats. Identities = 151/215 (70%), Positives = 169/215 (78%) Query: 1 MTASLLAPVDLYCERLSTAFWAEPVNALSNLAFLFAAYFLWRLPLPQGRSAVVMSRILTL 60 M SL APVDLYCERLS AFWAEPVNALSNL F+ AAY WRL +G + IL L Sbjct: 1 MNDSLFAPVDLYCERLSPAFWAEPVNALSNLGFIVAAYCAWRLLKSRGMRTSSTAGILAL 60 Query: 61 MVAVIGVGSFLFHTFAQRWALFADVIPISVYQVLFLAFYVRKVARCNWLVTMGWVLFFFV 120 M+AVIG+GSFLFHT A RWAL ADVIPIS+YQVLFLAFY+R+VAR + V W+L FF Sbjct: 61 MIAVIGIGSFLFHTVAVRWALLADVIPISLYQVLFLAFYLRQVARLSLPVVAAWLLAFFA 120 Query: 121 VTYGVGMLPDQWLNGSVASYGSAWLFIGGLGVYHWRMRKAEPGILLLATGVFTLSLVLRS 180 +YG+G LPDQWLNGS++SYGSAWLFI GLGVYHWR K EP LLLA GVFTLSL RS Sbjct: 121 TSYGIGALPDQWLNGSLSSYGSAWLFIAGLGVYHWRPDKHEPMTLLLALGVFTLSLAFRS 180 Query: 181 MDMAVCPSISIGTHMFWHLLNGVVLYLTTRAFVLN 215 DMAVC +SIGTHMFWHL N +VLYLTTRAF++N Sbjct: 181 ADMAVCHYVSIGTHMFWHLSNSIVLYLTTRAFIVN 215 >ref|YP_935206.1| hypothetical protein azo3704 [Azoarcus sp. BH72] emb|CAL96320.1| hypothetical membrane protein [Azoarcus sp. BH72] Length = 304 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 109/214 (50%), Positives = 142/214 (66%), Gaps = 1/214 (0%) Query: 7 APVDLYCERLSTAFWAEPVNALSNLAFLFAAYFLWRLPLPQGRSAVVMSRILTLMVAVIG 66 AP+DLYCER S AFWAEPVNAL+NL+F+ AA LW L Q R L VA IG Sbjct: 86 APLDLYCERTSPAFWAEPVNALTNLSFILAAIALWHLARQQPRRPGADGTFLIANVAAIG 145 Query: 67 VGSFLFHTFAQRWALFADVIPISVYQVLFLAFYVRKVARCNWLVTMGWVLFFFVVTYGVG 126 +GSFLFHT+A RW + ADV+PI VYQ++FLA Y R+V VT V F ++ G Sbjct: 146 LGSFLFHTYADRWTMLADVLPIFVYQLVFLACYARRVVGLGAAVTAALVGLFVLLALGFA 205 Query: 127 MLPDQWLNGSVASYGSAWLFIGGLGVYHWRMRKAEPGILLLATGVFTLSLVLRSMDMAVC 186 LP WLNGS+A YG+A++ + +GV+H R + E +LLA +F +S+ RS+D+++C Sbjct: 206 RLPGAWLNGSLA-YGAAFVSLAAIGVWHHRRAERERATVLLAFALFLVSVSFRSLDLSLC 264 Query: 187 PSISIGTHMFWHLLNGVVLYLTTRAFVLNADRPP 220 ++GTH WHLLNG VLYLTTRA++LN PP Sbjct: 265 ADGALGTHFLWHLLNGAVLYLTTRAYLLNRRAPP 298 >ref|ZP_01451101.1| hypothetical protein SPV1_04373 [Mariprofundus ferrooxydans PV-1] gb|EAU56025.1| hypothetical protein SPV1_04373 [Mariprofundus ferrooxydans PV-1] Length = 210 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 94/207 (45%), Positives = 131/207 (63%), Gaps = 3/207 (1%) Query: 9 VDLYCERLSTAFWAEPVNALSNLAFLFAAYFLWRLPLPQGRSAVVMSRILTLMVAVIGVG 68 +DLYCER T W EP+N LSN+AF AA+ +WR R + +L L++A IG G Sbjct: 2 IDLYCERTVTGLWGEPLNTLSNIAFFIAAWTIWRQARRNDRVDASLGLLLVLLLA-IGTG 60 Query: 69 SFLFHTFAQRWALFADVIPISVYQVLFLAFYVRKVARCNWLVTMGWVLFFFVVTYGVGML 128 S LFH FA W+ + DVIPI+++Q+ F+ Y+R+VA + L + F + Sbjct: 61 STLFHMFANAWSEWLDVIPITLFQLAFITLYLRRVAGLSLLPLSALLAVFLSASIAASHY 120 Query: 129 PDQWLNGSVASYGSAWLFIGGLGVYHWRMRKAEPGILLLATGVFTLSLVLRSMDMAVCPS 188 P Q +NGS A Y + LF+ G+G+YH+R RK P +LL A +F +SL+LRS+D AVC + Sbjct: 121 P-QLINGS-AGYLPSLLFLSGMGIYHYRSRKNGPWLLLGAAALFLVSLILRSIDNAVCAA 178 Query: 189 ISIGTHMFWHLLNGVVLYLTTRAFVLN 215 + +GTH+FWHL NG VLYLT RA + N Sbjct: 179 LPMGTHLFWHLFNGAVLYLTLRAHMDN 205 >ref|YP_002481380.1| hypothetical protein Cyan7425_0631 [Cyanothece sp. PCC 7425] gb|ACL43019.1| conserved hypothetical protein [Cyanothece sp. PCC 7425] Length = 214 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 129/212 (60%), Gaps = 3/212 (1%) Query: 9 VDLYCERLSTAFWAEPVNALSNLAFLFAAYFLWRLPLPQGRSAVVMSRILTLMVAVIGVG 68 +DLYCER + W EP+NALSNL+F AA+ +WRL + + + + I+ L IGVG Sbjct: 5 IDLYCERTAPGLWNEPLNALSNLSFFIAAWAMWRLAGHERKLSKSVWIIIGLS-GSIGVG 63 Query: 69 SFLFHTFAQRWALFADVIPISVYQVLFLAFYVRKVARCNWLVTMGWVLFFFVVTYGVGML 128 SFLFHTFA RWA D+IPI ++Q+ FL Y+R+V R G+++ F Sbjct: 64 SFLFHTFATRWANILDIIPILLFQLWFLWLYLRQVIRLKPFYA-GFLVIIFYFALDFSRQ 122 Query: 129 PDQWLNGSVASYGSAWLFIGGLGVYHWRMRKAEPGILLLATGVFTLSLVLRSMDMAVCPS 188 LNGS+ Y A L + GLG YH++ +K EP +LL A VF LSL+ R++D VCP Sbjct: 123 LKHLLNGSLV-YAPALLVLWGLGGYHYQQQKREPWVLLAAAAVFLLSLIFRTIDQRVCPD 181 Query: 189 ISIGTHMFWHLLNGVVLYLTTRAFVLNADRPP 220 IGTH WH+ NG++LYL+ RA +LN P Sbjct: 182 FGIGTHFLWHIFNGILLYLSARALILNCSPEP 213 >ref|ZP_03698501.1| conserved hypothetical membrane protein [Lutiella nitroferrum 2002] gb|EEG08495.1| conserved hypothetical membrane protein [Lutiella nitroferrum 2002] Length = 229 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 125/209 (59%), Gaps = 3/209 (1%) Query: 6 LAPVDLYCERLSTAFWAEPVNALSNLAFLFAAYFLWRLPLPQGRSAVVMSRILTLMVAVI 65 +A VDLYCER++ EP+N LSNLAF AA+++WR G + +R L ++A+I Sbjct: 1 MAYVDLYCERIAPGLLGEPINTLSNLAFFAAAWWVWRHAAMAG-AGSGRARWLAGLLALI 59 Query: 66 GVGSFLFHTFAQRWALFADVIPISVYQVLFLAFYVRKVARCNWLVTMGWVLFFFVVTYGV 125 G GSF FH FA WA + DV+PI ++Q++FL Y R +A + T ++ F Sbjct: 60 GAGSFTFHAFATGWAEWLDVLPILLFQLVFLWRYFRDIAGWRRITTGMFLAGFAAAGVEA 119 Query: 126 GMLPDQWLNGSVASYGSAWLFIGGLGVYHWRMRKAEPGILLLATGVFTLSLVLRSMDMAV 185 G P QWLNGS+ SY A L + G+ V+H R +A L A G F +SL RS+D AV Sbjct: 120 GNYP-QWLNGSL-SYLPALLVLLGIAVWHGRNGRAGWKSLAAAGGTFVVSLFFRSVDNAV 177 Query: 186 CPSISIGTHMFWHLLNGVVLYLTTRAFVL 214 CP+ +IGTH WH LN VVL L R ++L Sbjct: 178 CPAFAIGTHFLWHFLNAVVLALAVRGWML 206