BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5348.p (298 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777611.1| 6-phosphogluconate dehydrogenase [Herbaspiri... 515 e-144 ref|ZP_02883895.1| 3-hydroxyisobutyrate dehydrogenase [Burkholde... 444 e-123 ref|YP_001889637.1| 3-hydroxyisobutyrate dehydrogenase [Burkhold... 444 e-123 ref|YP_003909378.1| 3-hydroxyisobutyrate dehydrogenase [Burkhold... 444 e-123 ref|YP_001860583.1| 3-hydroxyisobutyrate dehydrogenase [Burkhold... 441 e-122 >ref|YP_003777611.1| 6-phosphogluconate dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ65703.1| 6-phosphogluconate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 298 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 289/298 (96%), Positives = 294/298 (98%) Query: 1 MSKNVGVIGLGAMGYGVASSLLRAGFNVHACDVRKEVLDKFAAAGGVACANPAELAAKVD 60 MS+NVGVIGLGAMGYGVASSLLRAGFNVHACDVRKEVLDKFAAAGGVACANPAELA KVD Sbjct: 1 MSRNVGVIGLGAMGYGVASSLLRAGFNVHACDVRKEVLDKFAAAGGVACANPAELAGKVD 60 Query: 61 VVITLVVNAAQTEMVLFGENGAVSAMKPGSVVISSATVAPDFAVELGKRLAEKDLLLLDA 120 VVITLVVNAAQTE VLFG+NGAVSAMKPGSVVISSATVAPDFA+ELGKRL EK LLLLDA Sbjct: 61 VVITLVVNAAQTETVLFGDNGAVSAMKPGSVVISSATVAPDFAIELGKRLVEKGLLLLDA 120 Query: 121 PVSGGAARAASGEMTMMTSGPAEVYAKIEDVLAGMAGKVYRLGDTHGIGSKVKIINQLLA 180 PVSGGAARAASGEMTMMTSGPAEVYAKIEDVLAGMAGKVYRLGDTHGIGSKVKIINQLLA Sbjct: 121 PVSGGAARAASGEMTMMTSGPAEVYAKIEDVLAGMAGKVYRLGDTHGIGSKVKIINQLLA 180 Query: 181 GVHIAASAEAMALGLREGVNPDALYDVITHSAGNSWMFENRVPHILNGDYTPLSAVDIFV 240 GVHIAASAEAMALGLREGVNPDALY+VITHSAGNSWMFENRVPHIL+GDYTPLSAVDIFV Sbjct: 181 GVHIAASAEAMALGLREGVNPDALYEVITHSAGNSWMFENRVPHILSGDYTPLSAVDIFV 240 Query: 241 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGIDLPPAKAK 298 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGIDLPPAKAK Sbjct: 241 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGIDLPPAKAK 298 >ref|ZP_02883895.1| 3-hydroxyisobutyrate dehydrogenase [Burkholderia graminis C4D1M] gb|EDT10555.1| 3-hydroxyisobutyrate dehydrogenase [Burkholderia graminis C4D1M] Length = 296 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 252/296 (85%), Positives = 265/296 (89%) Query: 1 MSKNVGVIGLGAMGYGVASSLLRAGFNVHACDVRKEVLDKFAAAGGVACANPAELAAKVD 60 MS+NVGVIGLGAMG GVA SLLRAGF VHACD+R EVL F GGV CA+PAEL A+ + Sbjct: 1 MSRNVGVIGLGAMGLGVARSLLRAGFRVHACDLRSEVLQGFVNEGGVGCASPAELGAQCE 60 Query: 61 VVITLVVNAAQTEMVLFGENGAVSAMKPGSVVISSATVAPDFAVELGKRLAEKDLLLLDA 120 VV+TLVVNAAQTE VLFG GAVSAMKPG VVI+SATVAPDFA+ELGKR+ L +LDA Sbjct: 61 VVVTLVVNAAQTEAVLFGAQGAVSAMKPGGVVIASATVAPDFAIELGKRVEAAGLQMLDA 120 Query: 121 PVSGGAARAASGEMTMMTSGPAEVYAKIEDVLAGMAGKVYRLGDTHGIGSKVKIINQLLA 180 PVSGGAARAASGEMTMMTSGPA YA EDVLA MAGKVYRLG HG GSKVKIINQLLA Sbjct: 121 PVSGGAARAASGEMTMMTSGPAAAYAACEDVLAKMAGKVYRLGSAHGAGSKVKIINQLLA 180 Query: 181 GVHIAASAEAMALGLREGVNPDALYDVITHSAGNSWMFENRVPHILNGDYTPLSAVDIFV 240 GVHIA +AEAMALGLREGV+PDALYDVITHSAGNSWMFENRVPHILNGDYTPLSAVDIFV Sbjct: 181 GVHIAVAAEAMALGLREGVDPDALYDVITHSAGNSWMFENRVPHILNGDYTPLSAVDIFV 240 Query: 241 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGIDLPPAK 296 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGID+P AK Sbjct: 241 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGIDVPAAK 296 >ref|YP_001889637.1| 3-hydroxyisobutyrate dehydrogenase [Burkholderia phytofirmans PsJN] gb|ACD20266.1| 3-hydroxyisobutyrate dehydrogenase [Burkholderia phytofirmans PsJN] Length = 296 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 250/296 (84%), Positives = 266/296 (89%) Query: 1 MSKNVGVIGLGAMGYGVASSLLRAGFNVHACDVRKEVLDKFAAAGGVACANPAELAAKVD 60 MS+NVGVIGLGAMG GVA SLLRAG VHACD+R EVL+ F A GGV CA PAEL A+ + Sbjct: 1 MSRNVGVIGLGAMGLGVARSLLRAGLKVHACDLRSEVLNAFVAEGGVGCATPAELGAQCE 60 Query: 61 VVITLVVNAAQTEMVLFGENGAVSAMKPGSVVISSATVAPDFAVELGKRLAEKDLLLLDA 120 VV+TLVVNAAQTE VLFGE GAV+AMKPG VVI+SATVAPDFA++LGKR+ L +LDA Sbjct: 61 VVVTLVVNAAQTEAVLFGEQGAVAAMKPGRVVIASATVAPDFAIQLGKRIEAAGLQMLDA 120 Query: 121 PVSGGAARAASGEMTMMTSGPAEVYAKIEDVLAGMAGKVYRLGDTHGIGSKVKIINQLLA 180 PVSGGAARAASGEMTMMTSGPA YA EDVLA MAGKVYRLG HG GSKVKIINQLLA Sbjct: 121 PVSGGAARAASGEMTMMTSGPAAAYAACEDVLAAMAGKVYRLGSEHGAGSKVKIINQLLA 180 Query: 181 GVHIAASAEAMALGLREGVNPDALYDVITHSAGNSWMFENRVPHILNGDYTPLSAVDIFV 240 GVHIA +AEAMALGLREGV+PDALY+VITHSAGNSWMFENRVPHILNGDYTPLSAVDIFV Sbjct: 181 GVHIAVAAEAMALGLREGVDPDALYEVITHSAGNSWMFENRVPHILNGDYTPLSAVDIFV 240 Query: 241 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGIDLPPAK 296 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGID+P AK Sbjct: 241 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGIDVPAAK 296 >ref|YP_003909378.1| 3-hydroxyisobutyrate dehydrogenase [Burkholderia sp. CCGE1003] gb|ADN60087.1| 3-hydroxyisobutyrate dehydrogenase [Burkholderia sp. CCGE1003] Length = 296 Score = 444 bits (1141), Expect = e-123, Method: Composition-based stats. Identities = 251/296 (84%), Positives = 266/296 (89%) Query: 1 MSKNVGVIGLGAMGYGVASSLLRAGFNVHACDVRKEVLDKFAAAGGVACANPAELAAKVD 60 MS+NVGVIGLGAMG GVA SLLRAGF VHACD+R EVL F GGV CA+PAEL A+ + Sbjct: 1 MSRNVGVIGLGAMGLGVARSLLRAGFRVHACDLRSEVLQAFVNEGGVGCASPAELGAQCE 60 Query: 61 VVITLVVNAAQTEMVLFGENGAVSAMKPGSVVISSATVAPDFAVELGKRLAEKDLLLLDA 120 VV+TLVVNAAQTE VLFGE GA +AMKPGSVVI+SATVAPDFA+ELGKR+ L +LDA Sbjct: 61 VVVTLVVNAAQTEAVLFGEQGAAAAMKPGSVVIASATVAPDFAIELGKRIEAAGLQMLDA 120 Query: 121 PVSGGAARAASGEMTMMTSGPAEVYAKIEDVLAGMAGKVYRLGDTHGIGSKVKIINQLLA 180 PVSGGAARAASGEMTMMTSGPA YA EDVLA MAGKVYRLG HG GSKVKIINQLLA Sbjct: 121 PVSGGAARAASGEMTMMTSGPAAAYAACEDVLAAMAGKVYRLGSAHGAGSKVKIINQLLA 180 Query: 181 GVHIAASAEAMALGLREGVNPDALYDVITHSAGNSWMFENRVPHILNGDYTPLSAVDIFV 240 GVHIA +AEAMALGLREGV+PDALYDVITHSAGNSWMFENRVPHILNGDYTPLSAVDIFV Sbjct: 181 GVHIAVAAEAMALGLREGVDPDALYDVITHSAGNSWMFENRVPHILNGDYTPLSAVDIFV 240 Query: 241 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGIDLPPAK 296 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGI++P AK Sbjct: 241 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGIEVPAAK 296 >ref|YP_001860583.1| 3-hydroxyisobutyrate dehydrogenase [Burkholderia phymatum STM815] gb|ACC73537.1| 3-hydroxyisobutyrate dehydrogenase [Burkholderia phymatum STM815] Length = 296 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 248/296 (83%), Positives = 266/296 (89%) Query: 1 MSKNVGVIGLGAMGYGVASSLLRAGFNVHACDVRKEVLDKFAAAGGVACANPAELAAKVD 60 MS+NVGVIGLGAMG GVA SLLR GFNVHACDVR +VL++F GG ACANPAEL A+ D Sbjct: 1 MSRNVGVIGLGAMGMGVARSLLRGGFNVHACDVRPDVLEQFVGDGGKACANPAELGAQCD 60 Query: 61 VVITLVVNAAQTEMVLFGENGAVSAMKPGSVVISSATVAPDFAVELGKRLAEKDLLLLDA 120 VV+TLVVNAAQTE VLFGE GAV +MK G VVI+ ATVAPDFA++LG+R+ L +LDA Sbjct: 61 VVVTLVVNAAQTEAVLFGEQGAVKSMKAGGVVIACATVAPDFAIDLGRRIEAAGLQMLDA 120 Query: 121 PVSGGAARAASGEMTMMTSGPAEVYAKIEDVLAGMAGKVYRLGDTHGIGSKVKIINQLLA 180 PVSGGAARAASGEMTMMTSGPA YA EDVLA MAGKVYRLGD HG GSKVKIINQLLA Sbjct: 121 PVSGGAARAASGEMTMMTSGPAAAYAACEDVLAAMAGKVYRLGDVHGAGSKVKIINQLLA 180 Query: 181 GVHIAASAEAMALGLREGVNPDALYDVITHSAGNSWMFENRVPHILNGDYTPLSAVDIFV 240 GVHIAA+AEAMALGLREGV+PDALY+VITHSAGNSWMFENRVPHILNGDYTPLSAVDIFV Sbjct: 181 GVHIAAAAEAMALGLREGVDPDALYEVITHSAGNSWMFENRVPHILNGDYTPLSAVDIFV 240 Query: 241 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGIDLPPAK 296 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGID+P + Sbjct: 241 KDLGLVLDTARRSKFPLPLSAAAHQMFMMASTAGHGGEDDSAVIKIFPGIDVPAKR 296