BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5345.p (437 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777608.1| major facilitator superfamily permease [Herb... 798 0.0 ref|ZP_06684648.1| major facilitator family transporter [Achromo... 600 e-169 ref|YP_003909375.1| major facilitator superfamily protein [Burkh... 599 e-169 ref|ZP_02883898.1| major facilitator superfamily MFS_1 [Burkhold... 595 e-168 ref|YP_004231714.1| major facilitator superfamily protein [Burkh... 593 e-167 >ref|YP_003777608.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ65700.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 437 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 431/437 (98%), Positives = 435/437 (99%) Query: 1 MTTASTSGVGLDVNDKSKDGLYKKVFWRIMPFLMLCYVIAYLDRVNVGFAKLQMSQDLGF 60 MTTAST+GVGLDVNDKSKDGLYKKVFWRIMPFLMLCYVIAYLDRVNVGFAKLQMSQDLGF Sbjct: 1 MTTASTTGVGLDVNDKSKDGLYKKVFWRIMPFLMLCYVIAYLDRVNVGFAKLQMSQDLGF 60 Query: 61 SETVFGLGAGLFFIGYFLFEVPSNILMHKVGARIWIARIMITWGILSAAFMFVQNATQFY 120 SETVFGLGAGLFFIGYFLFEVPSNILMHKVGARIWIARIMITWGILSAAFMFVQNATQFY Sbjct: 61 SETVFGLGAGLFFIGYFLFEVPSNILMHKVGARIWIARIMITWGILSAAFMFVQNATQFY 120 Query: 121 VLRFLLGLAEAGFYPGIILYLTYWFPSHRRAKVIAVFMSGIPVAGILGNPLSGWIMDAFH 180 +LRFLLGLAEAGFYPGIILYLTYWFPSHRRAKVIAVFMSGIPVAGILGNPLSGWIMDAFH Sbjct: 121 ILRFLLGLAEAGFYPGIILYLTYWFPSHRRAKVIAVFMSGIPVAGILGNPLSGWIMDAFH 180 Query: 181 NNGGLEGWQWMFLIEAIPAVLIGVATVLYLDNDVKSAKWLSDEEKASLQADIDGDAKGKE 240 NGGLEGWQWMFLIEAIPAVLIGVATVLYLDNDVKSAKWL+DEEKASLQADIDGDAKGKE Sbjct: 181 QNGGLEGWQWMFLIEAIPAVLIGVATVLYLDNDVKSAKWLNDEEKASLQADIDGDAKGKE 240 Query: 241 SKHGFGAIVKDARVWLMCLIYFSFVMGQYGLTLWMPTLVKATGVKGNLEIGLLSAIPFGC 300 SKHGFGAIVKDARVWLMCLIYFSFVMGQYGLTLWMPTLVKATGVKGNLEIGLLSAIPFGC Sbjct: 241 SKHGFGAIVKDARVWLMCLIYFSFVMGQYGLTLWMPTLVKATGVKGNLEIGLLSAIPFGC 300 Query: 301 AIIAMNLIGRSADRMRERRWHLVIPALMGGVGFVGAALFADNTAISIASLSLAAAGVLTC 360 AIIAMNLIGRSADRMRERRWHLVIPALMGGVGFVGAALFADNTA+SIASLSLAAAGVLTC Sbjct: 301 AIIAMNLIGRSADRMRERRWHLVIPALMGGVGFVGAALFADNTAVSIASLSLAAAGVLTC 360 Query: 361 APLFWSLPTAFLSGAAAAVGIAAINSVGNLAGFVSPYLIGYLKDLTHNNATGMYMLAVML 420 APLFWSLPTAFLSGAAAAVGIAAINSVGNLAGFVSPYLIGYLKDLTHNNATGMYMLAVML Sbjct: 361 APLFWSLPTAFLSGAAAAVGIAAINSVGNLAGFVSPYLIGYLKDLTHNNATGMYMLAVML 420 Query: 421 VVGSIATLATKPSMVNK 437 VVGSIATLATKP MVNK Sbjct: 421 VVGSIATLATKPGMVNK 437 >ref|ZP_06684648.1| major facilitator family transporter [Achromobacter piechaudii ATCC 43553] gb|EFF78434.1| major facilitator family transporter [Achromobacter piechaudii ATCC 43553] Length = 445 Score = 600 bits (1548), Expect = e-169, Method: Composition-based stats. Identities = 310/417 (74%), Positives = 355/417 (85%), Gaps = 1/417 (0%) Query: 22 YKKVFWRIMPFLMLCYVIAYLDRVNVGFAKLQMSQDLGFSETVFGLGAGLFFIGYFLFEV 81 Y KVFWR++PFLMLCYVIAYLDRVNVGFAKLQMSQDLGFSETVFGLGAG+FFIGYFLFEV Sbjct: 29 YAKVFWRLVPFLMLCYVIAYLDRVNVGFAKLQMSQDLGFSETVFGLGAGVFFIGYFLFEV 88 Query: 82 PSNILMHKVGARIWIARIMITWGILSAAFMFVQNATQFYVLRFLLGLAEAGFYPGIILYL 141 PSN+LMH++GARIWIARIMITWGILS FMFV+ T FY+LRFLLGLAEAGFYPG+ILYL Sbjct: 89 PSNLLMHRLGARIWIARIMITWGILSGMFMFVETPTGFYILRFLLGLAEAGFYPGVILYL 148 Query: 142 TYWFPSHRRAKVIAVFMSGIPVAGILGNPLSGWIMDAFHNNGGLEGWQWMFLIEAIPAVL 201 TYW+P+HRRAK+IA+FMS IPVAGI GNPLSGWIM+AFH GL+GWQWMFLIEAIPA+L Sbjct: 149 TYWYPAHRRAKIIALFMSAIPVAGIFGNPLSGWIMEAFHGTHGLQGWQWMFLIEAIPALL 208 Query: 202 IGVATVLYLDNDVKSAKWLSDEEKASLQADIDGDAK-GKESKHGFGAIVKDARVWLMCLI 260 IGV T++YLDN + SAKWL+ +EK L +I+ D K KH GA+ DARVW MCLI Sbjct: 209 IGVVTIMYLDNGIASAKWLTTDEKQLLTREIEQDQKQAGTQKHSLGAVFSDARVWWMCLI 268 Query: 261 YFSFVMGQYGLTLWMPTLVKATGVKGNLEIGLLSAIPFGCAIIAMNLIGRSADRMRERRW 320 YF+FV GQYGLT WMPTL+K+TGV G IGLLSAIPF CAI+ MNL+G SAD+ RERRW Sbjct: 269 YFAFVAGQYGLTFWMPTLIKSTGVTGAFNIGLLSAIPFLCAIVVMNLLGHSADKRRERRW 328 Query: 321 HLVIPALMGGVGFVGAALFADNTAISIASLSLAAAGVLTCAPLFWSLPTAFLSGAAAAVG 380 HL++PAL G VGF AA FAD+T IS+ LS+AAAGVLTCAPLFWSLPTAFLSG AAA G Sbjct: 329 HLIVPALAGAVGFTAAASFADSTVISLICLSIAAAGVLTCAPLFWSLPTAFLSGTAAAAG 388 Query: 381 IAAINSVGNLAGFVSPYLIGYLKDLTHNNATGMYMLAVMLVVGSIATLATKPSMVNK 437 IA +NSVGNLAGF SPY+IGYLKDLT + A+GMY+LA +LV+G+IA T +VN+ Sbjct: 389 IAIVNSVGNLAGFASPYMIGYLKDLTQSTASGMYVLAAVLVIGAIAVWFTPARLVNR 445 >ref|YP_003909375.1| major facilitator superfamily protein [Burkholderia sp. CCGE1003] gb|ADN60084.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1003] Length = 444 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 312/417 (74%), Positives = 352/417 (84%), Gaps = 1/417 (0%) Query: 22 YKKVFWRIMPFLMLCYVIAYLDRVNVGFAKLQMSQDLGFSETVFGLGAGLFFIGYFLFEV 81 Y+KVFWRI+PFLMLCYV+AYLDRVNVGFAKLQMSQDL FSETVFGLGAG+FFIGYFLFE+ Sbjct: 28 YRKVFWRIVPFLMLCYVVAYLDRVNVGFAKLQMSQDLAFSETVFGLGAGVFFIGYFLFEL 87 Query: 82 PSNILMHKVGARIWIARIMITWGILSAAFMFVQNATQFYVLRFLLGLAEAGFYPGIILYL 141 PSNILMHK+GARIWIARIMITWG++SA F+FV+ QFY+LRFLLGLAEAGFYPG+ILYL Sbjct: 88 PSNILMHKIGARIWIARIMITWGVMSALFVFVKTPAQFYILRFLLGLAEAGFYPGVILYL 147 Query: 142 TYWFPSHRRAKVIAVFMSGIPVAGILGNPLSGWIMDAFHNNGGLEGWQWMFLIEAIPAVL 201 TYWFPSHRRAK+IAVFMS IPV+GI GNPLSGWIM AFHNN GL GWQWMFLIEA+PAV Sbjct: 148 TYWFPSHRRAKIIAVFMSAIPVSGIFGNPLSGWIMQAFHNNSGLAGWQWMFLIEAVPAVA 207 Query: 202 IGVATVLYLDNDVKSAKWLSDEEKASLQADIDGD-AKGKESKHGFGAIVKDARVWLMCLI 260 IG+AT+LYLDN + SAKWLSD EK L +I K K H A+ +D+R W M LI Sbjct: 208 IGIATILYLDNGIASAKWLSDPEKRLLSDEIAASQPKEKADAHSLRAVFRDSRTWWMSLI 267 Query: 261 YFSFVMGQYGLTLWMPTLVKATGVKGNLEIGLLSAIPFGCAIIAMNLIGRSADRMRERRW 320 YF+FV GQYGLT WMPTL+K+TGV G IGLLSAIPF CAI+ MNL+G SAD+ RERRW Sbjct: 268 YFAFVTGQYGLTFWMPTLIKSTGVSGAFNIGLLSAIPFVCAIVVMNLLGHSADKHRERRW 327 Query: 321 HLVIPALMGGVGFVGAALFADNTAISIASLSLAAAGVLTCAPLFWSLPTAFLSGAAAAVG 380 HL++PAL G VGF AA FA NT +SIA LSLAAAGVLTCAPLFWSLPTAF+SGA AA G Sbjct: 328 HLIVPALFGAVGFTVAASFASNTVVSIAFLSLAAAGVLTCAPLFWSLPTAFMSGATAAAG 387 Query: 381 IAAINSVGNLAGFVSPYLIGYLKDLTHNNATGMYMLAVMLVVGSIATLATKPSMVNK 437 IA INS+GNLAGF SPY+IGYLKDLTH+ TGMY+LA MLV+G+ AT T +VN+ Sbjct: 388 IAIINSIGNLAGFASPYMIGYLKDLTHSTQTGMYVLAGMLVIGAFATWLTPAKLVNR 444 >ref|ZP_02883898.1| major facilitator superfamily MFS_1 [Burkholderia graminis C4D1M] gb|EDT10558.1| major facilitator superfamily MFS_1 [Burkholderia graminis C4D1M] Length = 444 Score = 595 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 311/417 (74%), Positives = 353/417 (84%), Gaps = 1/417 (0%) Query: 22 YKKVFWRIMPFLMLCYVIAYLDRVNVGFAKLQMSQDLGFSETVFGLGAGLFFIGYFLFEV 81 YKKVFWRI+PFLMLCYV+AYLDRVNVGFAKLQMSQDL FSETVFGLGAG+FFIGYFLFE+ Sbjct: 28 YKKVFWRIVPFLMLCYVVAYLDRVNVGFAKLQMSQDLAFSETVFGLGAGVFFIGYFLFEL 87 Query: 82 PSNILMHKVGARIWIARIMITWGILSAAFMFVQNATQFYVLRFLLGLAEAGFYPGIILYL 141 PSNILMHK+GARIWIARIMITWG++SA F+FV+ QFY+LRFLLGLAEAGFYPG+ILYL Sbjct: 88 PSNILMHKLGARIWIARIMITWGVMSALFVFVKTPAQFYILRFLLGLAEAGFYPGVILYL 147 Query: 142 TYWFPSHRRAKVIAVFMSGIPVAGILGNPLSGWIMDAFHNNGGLEGWQWMFLIEAIPAVL 201 TYWFPSHRRAK+IAVFMS IPV+GI GNPLSGWIM +FHN+ GL GWQWMFLIEA+PAV Sbjct: 148 TYWFPSHRRAKIIAVFMSAIPVSGIFGNPLSGWIMQSFHNSSGLAGWQWMFLIEAVPAVA 207 Query: 202 IGVATVLYLDNDVKSAKWLSDEEKASLQADIDGD-AKGKESKHGFGAIVKDARVWLMCLI 260 IG+AT+LYLDN + SAKWLS+ EK L +I K K S H A+ +D R W M LI Sbjct: 208 IGIATILYLDNGIASAKWLSEPEKRLLSDEIAASQPKEKASAHSLRAVFRDPRTWWMSLI 267 Query: 261 YFSFVMGQYGLTLWMPTLVKATGVKGNLEIGLLSAIPFGCAIIAMNLIGRSADRMRERRW 320 YF+FV GQYGLT WMPTL+K+TGV G IGLLSAIPF CAI+ MNL+G SAD+ RERRW Sbjct: 268 YFAFVTGQYGLTFWMPTLIKSTGVSGAFNIGLLSAIPFLCAIVVMNLMGHSADKRRERRW 327 Query: 321 HLVIPALMGGVGFVGAALFADNTAISIASLSLAAAGVLTCAPLFWSLPTAFLSGAAAAVG 380 HL++PAL G VGF AA FA NT +SIA LSLAAAGVLTCAPLFWSLPTAF+SGA AA G Sbjct: 328 HLIVPALFGAVGFTVAASFASNTVVSIAFLSLAAAGVLTCAPLFWSLPTAFMSGATAAAG 387 Query: 381 IAAINSVGNLAGFVSPYLIGYLKDLTHNNATGMYMLAVMLVVGSIATLATKPSMVNK 437 IA INS+GNLAGF SPY+IGYLKDLTH+ +GMY+LA MLV+G+IAT T +VN+ Sbjct: 388 IAIINSIGNLAGFASPYMIGYLKDLTHSTQSGMYVLAGMLVIGAIATWLTPAKLVNR 444 >ref|YP_004231714.1| major facilitator superfamily protein [Burkholderia sp. CCGE1001] gb|ADX58654.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1001] Length = 444 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 309/417 (74%), Positives = 352/417 (84%), Gaps = 1/417 (0%) Query: 22 YKKVFWRIMPFLMLCYVIAYLDRVNVGFAKLQMSQDLGFSETVFGLGAGLFFIGYFLFEV 81 YKKVFWRI+PFLMLCYV+AYLDRVNVGFAKLQMSQDL FSETVFGLGAG+FFIGYFLFE+ Sbjct: 28 YKKVFWRIVPFLMLCYVVAYLDRVNVGFAKLQMSQDLAFSETVFGLGAGVFFIGYFLFEL 87 Query: 82 PSNILMHKVGARIWIARIMITWGILSAAFMFVQNATQFYVLRFLLGLAEAGFYPGIILYL 141 PSNILMHK+GARIWIARIMITWG++SA F+FV+ QFY+LRFLLGLAEAGFYPG+ILYL Sbjct: 88 PSNILMHKIGARIWIARIMITWGVMSALFVFVKTPAQFYILRFLLGLAEAGFYPGVILYL 147 Query: 142 TYWFPSHRRAKVIAVFMSGIPVAGILGNPLSGWIMDAFHNNGGLEGWQWMFLIEAIPAVL 201 TYWFPSHRRAK+IAVFMS IPV+GI GNPLSGWIM AFHN+ GL GWQWMFLIEA+PAV Sbjct: 148 TYWFPSHRRAKIIAVFMSAIPVSGIFGNPLSGWIMQAFHNSSGLAGWQWMFLIEAVPAVA 207 Query: 202 IGVATVLYLDNDVKSAKWLSDEEKASLQADIDGD-AKGKESKHGFGAIVKDARVWLMCLI 260 +G+AT+LYLDN + AKWLS+ EK L +I K K + H A+ +D R W M LI Sbjct: 208 VGIATILYLDNGIAGAKWLSEPEKRLLADEIAASQPKQKANAHSLRAVFRDPRTWWMSLI 267 Query: 261 YFSFVMGQYGLTLWMPTLVKATGVKGNLEIGLLSAIPFGCAIIAMNLIGRSADRMRERRW 320 YF+FV GQYGLT WMPTL+K+TGV G IGLLSAIPF CAI+ MNL+G SAD+ RERRW Sbjct: 268 YFAFVTGQYGLTFWMPTLIKSTGVSGAFNIGLLSAIPFICAIVVMNLLGHSADKRRERRW 327 Query: 321 HLVIPALMGGVGFVGAALFADNTAISIASLSLAAAGVLTCAPLFWSLPTAFLSGAAAAVG 380 HL++PAL G VGF AA FA NT +SIA LSLAAAGVLTCAPLFWSLPTAF+SGA AA G Sbjct: 328 HLIVPALFGAVGFTVAASFASNTVVSIAFLSLAAAGVLTCAPLFWSLPTAFMSGATAAAG 387 Query: 381 IAAINSVGNLAGFVSPYLIGYLKDLTHNNATGMYMLAVMLVVGSIATLATKPSMVNK 437 IA INS+GNLAGF SPY+IGYLKDLTH+ +GMY+LA MLV+G+IAT T +VN+ Sbjct: 388 IAIINSIGNLAGFASPYMIGYLKDLTHSTQSGMYVLAGMLVIGAIATWLTPAKLVNR 444