BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5344.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777607.1| hydroxypyruvate isomerase [Herbaspirillum se... 540 e-152 ref|YP_001860587.1| hydroxypyruvate isomerase [Burkholderia phym... 426 e-117 ref|YP_003909374.1| hydroxypyruvate isomerase [Burkholderia sp. ... 426 e-117 ref|YP_001889633.1| hydroxypyruvate isomerase [Burkholderia phyt... 425 e-117 ref|ZP_02883899.1| Hydroxypyruvate isomerase [Burkholderia grami... 424 e-116 >ref|YP_003777607.1| hydroxypyruvate isomerase [Herbaspirillum seropedicae SmR1] gb|ADJ65699.1| hydroxypyruvate isomerase protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 257/267 (96%), Positives = 264/267 (98%) Query: 36 MLRFAANLSMMYVEHDFLDRFAAAAKDGFSGVEFLFPYDYQPEEIKSRLEANGLTQALFN 95 MLRFAANLSMMYVEHDFLDRFAAAAKDGFSGVEFLFPYDY PEEIKSRLEANGLTQALFN Sbjct: 1 MLRFAANLSMMYVEHDFLDRFAAAAKDGFSGVEFLFPYDYAPEEIKSRLEANGLTQALFN 60 Query: 96 APPGDWAAGERGIASLPGREDEFKRSIETALKYASVIGNKTLHVMAGLIKPDQDRARHRA 155 APPGDWAAGERGIASLPGR+DEFKRSIETALKYA+VIGN+TLHVMAGLIKP QDRA+HRA Sbjct: 61 APPGDWAAGERGIASLPGRQDEFKRSIETALKYAAVIGNQTLHVMAGLIKPGQDRAQHRA 120 Query: 156 VYLDNLSYAAHQAESAGLTVVIEPINTRNIPGFFLNRQDDAQAICAEMGAENLKVQFDCY 215 VYLDNLSYAAHQAESAGLTVVIEPINTRNIPGFFLNRQDDAQAICAE+GA NLKVQFDCY Sbjct: 121 VYLDNLSYAAHQAESAGLTVVIEPINTRNIPGFFLNRQDDAQAICAEVGAPNLKVQFDCY 180 Query: 216 HCQIVEGDVAVKLKRDMPGIGHIQIAGVPERHEPDVGELNYPYLLKLIDSLGYQGWIGCE 275 HCQIVEGDVAVKLKRDMPGIGHIQIAGVPERHEPDVGELNYPYLLKLID+LGYQGWIGCE Sbjct: 181 HCQIVEGDVAVKLKRDMPGIGHIQIAGVPERHEPDVGELNYPYLLKLIDTLGYQGWIGCE 240 Query: 276 YNPAGATSAGLGWLKALAEQGLTTLKK 302 YNPAGATSAGLGWL+ALAEQGLTTLKK Sbjct: 241 YNPAGATSAGLGWLRALAEQGLTTLKK 267 >ref|YP_001860587.1| hydroxypyruvate isomerase [Burkholderia phymatum STM815] gb|ACC73541.1| Hydroxypyruvate isomerase [Burkholderia phymatum STM815] Length = 262 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 198/255 (77%), Positives = 220/255 (86%) Query: 36 MLRFAANLSMMYVEHDFLDRFAAAAKDGFSGVEFLFPYDYQPEEIKSRLEANGLTQALFN 95 M RFAANLSMMY EH FLDRFAAAA+DGF VEFLFPYD+ ++KSRL +GLTQALFN Sbjct: 1 MPRFAANLSMMYNEHAFLDRFAAAARDGFQAVEFLFPYDFPAADLKSRLTEHGLTQALFN 60 Query: 96 APPGDWAAGERGIASLPGREDEFKRSIETALKYASVIGNKTLHVMAGLIKPDQDRARHRA 155 APPGDW AGERGIASLPGREDEF+R ++TAL+YA V+GN LHVMAGLIKP+Q RA HR Sbjct: 61 APPGDWGAGERGIASLPGREDEFRRGVDTALEYARVLGNDKLHVMAGLIKPEQSRAAHRD 120 Query: 156 VYLDNLSYAAHQAESAGLTVVIEPINTRNIPGFFLNRQDDAQAICAEMGAENLKVQFDCY 215 VYL NL+YAA A + G+TVVIEPINTR+IPGFFLNRQDDAQAICAE+GA NLKVQFD Y Sbjct: 121 VYLKNLAYAAQTARAEGITVVIEPINTRDIPGFFLNRQDDAQAICAEVGAANLKVQFDLY 180 Query: 216 HCQIVEGDVAVKLKRDMPGIGHIQIAGVPERHEPDVGELNYPYLLKLIDSLGYQGWIGCE 275 HCQIVEGD+AVKLKRDM GIGHIQIAGVPERHEPD+GE+NYPYL LID LGY GW+GCE Sbjct: 181 HCQIVEGDLAVKLKRDMKGIGHIQIAGVPERHEPDIGEVNYPYLFALIDELGYDGWLGCE 240 Query: 276 YNPAGATSAGLGWLK 290 Y P TS GLGW++ Sbjct: 241 YRPRAGTSEGLGWIR 255 >ref|YP_003909374.1| hydroxypyruvate isomerase [Burkholderia sp. CCGE1003] gb|ADN60083.1| Hydroxypyruvate isomerase [Burkholderia sp. CCGE1003] Length = 261 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 202/255 (79%), Positives = 228/255 (89%) Query: 36 MLRFAANLSMMYVEHDFLDRFAAAAKDGFSGVEFLFPYDYQPEEIKSRLEANGLTQALFN 95 M RFAANLSMMY EH FLDRFAAAAKDGF VEFLFPYD++ EEIK+RL+ANGLTQALFN Sbjct: 1 MPRFAANLSMMYNEHAFLDRFAAAAKDGFKAVEFLFPYDFRAEEIKARLDANGLTQALFN 60 Query: 96 APPGDWAAGERGIASLPGREDEFKRSIETALKYASVIGNKTLHVMAGLIKPDQDRARHRA 155 APPGDWA+GERGIA+LPGREDEF+RSI+TAL YA VIGN+ LHVMAGLI DQ R RHR Sbjct: 61 APPGDWASGERGIATLPGREDEFRRSIDTALDYARVIGNRKLHVMAGLIAADQSRERHRE 120 Query: 156 VYLDNLSYAAHQAESAGLTVVIEPINTRNIPGFFLNRQDDAQAICAEMGAENLKVQFDCY 215 VYL NL++AA A++ G+T+VIEPINTR++PGFFLNRQD+AQAICAE+GA NLKVQFDCY Sbjct: 121 VYLRNLAHAAQAAQAEGMTIVIEPINTRDMPGFFLNRQDEAQAICAEVGAPNLKVQFDCY 180 Query: 216 HCQIVEGDVAVKLKRDMPGIGHIQIAGVPERHEPDVGELNYPYLLKLIDSLGYQGWIGCE 275 HCQIVEGD+A+KL+RD GIGHIQIAGVPERHEPD GE+NYPYL ++IDSLGY G+IGCE Sbjct: 181 HCQIVEGDLAMKLRRDYAGIGHIQIAGVPERHEPDTGEINYPYLFEVIDSLGYDGYIGCE 240 Query: 276 YNPAGATSAGLGWLK 290 Y P ATSAGLGWLK Sbjct: 241 YRPRAATSAGLGWLK 255 >ref|YP_001889633.1| hydroxypyruvate isomerase [Burkholderia phytofirmans PsJN] gb|ACD20262.1| Hydroxypyruvate isomerase [Burkholderia phytofirmans PsJN] Length = 262 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 204/255 (80%), Positives = 227/255 (89%) Query: 36 MLRFAANLSMMYVEHDFLDRFAAAAKDGFSGVEFLFPYDYQPEEIKSRLEANGLTQALFN 95 M RFAANLSMMY EH FLDRFAAAA+DGF VEFLFPYD+ +EIK+RL+A+GLTQALFN Sbjct: 1 MPRFAANLSMMYNEHAFLDRFAAAAQDGFEAVEFLFPYDFPADEIKARLDASGLTQALFN 60 Query: 96 APPGDWAAGERGIASLPGREDEFKRSIETALKYASVIGNKTLHVMAGLIKPDQDRARHRA 155 APPGDWA GERGIASLPGREDEF+R I+TAL YA V+GN+ LHVMAGLI DQ RA+HR Sbjct: 61 APPGDWAGGERGIASLPGREDEFRRGIDTALDYARVLGNRKLHVMAGLIGADQPRAKHRE 120 Query: 156 VYLDNLSYAAHQAESAGLTVVIEPINTRNIPGFFLNRQDDAQAICAEMGAENLKVQFDCY 215 VYL NL++AA A++ G+TVVIEPINTR++PGFFL RQD+AQAICAE+GAENLKVQFDCY Sbjct: 121 VYLSNLAHAAKAAQAEGITVVIEPINTRDMPGFFLTRQDEAQAICAEVGAENLKVQFDCY 180 Query: 216 HCQIVEGDVAVKLKRDMPGIGHIQIAGVPERHEPDVGELNYPYLLKLIDSLGYQGWIGCE 275 HCQIVEGD+AVKLKRDM GIGHIQIAGVPERHEPD GELNYPYLL+LIDSLGY G+IGCE Sbjct: 181 HCQIVEGDLAVKLKRDMAGIGHIQIAGVPERHEPDTGELNYPYLLELIDSLGYDGYIGCE 240 Query: 276 YNPAGATSAGLGWLK 290 Y P TSAGLGWLK Sbjct: 241 YRPRAGTSAGLGWLK 255 >ref|ZP_02883899.1| Hydroxypyruvate isomerase [Burkholderia graminis C4D1M] gb|EDT10559.1| Hydroxypyruvate isomerase [Burkholderia graminis C4D1M] Length = 261 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 200/255 (78%), Positives = 228/255 (89%) Query: 36 MLRFAANLSMMYVEHDFLDRFAAAAKDGFSGVEFLFPYDYQPEEIKSRLEANGLTQALFN 95 M RFAANLSMMY EH FLDRFAAAAKDGF VEFLFPYD++ EEIK+RL+ANGLTQALFN Sbjct: 1 MPRFAANLSMMYNEHAFLDRFAAAAKDGFKAVEFLFPYDFRAEEIKARLDANGLTQALFN 60 Query: 96 APPGDWAAGERGIASLPGREDEFKRSIETALKYASVIGNKTLHVMAGLIKPDQDRARHRA 155 APPGDWA+GERGIA+LPGREDEF+RSI+TAL YA VIGN+ LHVMAGLI DQ R RHR Sbjct: 61 APPGDWASGERGIATLPGREDEFRRSIDTALDYARVIGNRKLHVMAGLIAADQPRERHRE 120 Query: 156 VYLDNLSYAAHQAESAGLTVVIEPINTRNIPGFFLNRQDDAQAICAEMGAENLKVQFDCY 215 VYL NL++AA A++ G+T+VIEPINTR++PGFFLNRQD+AQAICAE+GA NLKVQFDCY Sbjct: 121 VYLQNLAHAAKAAQAEGITIVIEPINTRDMPGFFLNRQDEAQAICAEVGAPNLKVQFDCY 180 Query: 216 HCQIVEGDVAVKLKRDMPGIGHIQIAGVPERHEPDVGELNYPYLLKLIDSLGYQGWIGCE 275 HCQIVEGD+A+KL+RD GIGHIQ+AGVPERHEPD GE+NYPYL ++ID+LGY G+IGCE Sbjct: 181 HCQIVEGDLAMKLRRDFAGIGHIQVAGVPERHEPDTGEINYPYLFEVIDALGYDGYIGCE 240 Query: 276 YNPAGATSAGLGWLK 290 Y P ATSAGLGWLK Sbjct: 241 YRPRAATSAGLGWLK 255