BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5340.p (306 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774003.1| hypothetical protein Hsero_0576 [Herbaspiril... 268 1e-69 ref|YP_003016081.1| hypothetical protein PC1_0489 [Pectobacteriu... 261 7e-68 gb|AEG67602.1| esterase/lipase/thioesterase; protein [Ralstonia ... 254 1e-65 ref|YP_004846125.1| hypothetical protein NH8B_0879 [Pseudogulben... 254 2e-65 ref|YP_003750298.1| thioesterase/hydrolase [Ralstonia solanacear... 251 7e-65 >ref|YP_003774003.1| hypothetical protein Hsero_0576 [Herbaspirillum seropedicae SmR1] gb|ADJ62095.1| hypothetical transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 290 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 138/248 (55%), Positives = 177/248 (71%), Gaps = 3/248 (1%) Query: 49 SDPDLVQRADALVAPAGLQREEVRGGPFVLTAYVHARPKAPLLRVYLEGDGRAWITRNQV 108 SDP + ADA+ AGL+RE R GPF+LTAYV L +Y+EGDG AW +R + Sbjct: 37 SDP--LANADAMTQAAGLRRELTRSGPFLLTAYVRISRLDQPLNLYIEGDGLAWRSRYEP 94 Query: 109 SPDPTPHTAMGLRLAASD-GGDVVYLARPCQFTPMARNPICQPEYWAGLRYSPLVVSAMD 167 S DPTP A+GL LAA+D ++VYLARPCQFTPMA NP C YW G R++P VV+AM+ Sbjct: 95 SADPTPRKALGLSLAAADNSANMVYLARPCQFTPMASNPACNVGYWTGKRFAPEVVAAMN 154 Query: 168 EALSRYVARLQPARLELVGFSGGGAIAVLLAARRKDVSAIRTVAGNLDHVAVNQWHKVSQ 227 EA+ Y+ R+ R+ LVG+SGGGAIAVL+AARR DV+ +RTVAGNLDHVA+N+WHKV+ Sbjct: 155 EAVGHYLERVPGQRVNLVGYSGGGAIAVLIAARRNDVATVRTVAGNLDHVALNRWHKVTP 214 Query: 228 MPGSLNPIDVAAQVERIPQLHVSGAEDTVIPTAITHSFVDQVGRCAGLMTVQGMAHQSDW 287 M SLN IDVA++V I QLH SG++D ++P +FV QVG CA L + G++H+ DW Sbjct: 215 MSDSLNAIDVASRVAGIAQLHFSGSDDVIVPERFARAFVQQVGACAHLRVLPGLSHEGDW 274 Query: 288 DRLWPKLL 295 +WP LL Sbjct: 275 AAIWPSLL 282 >ref|YP_003016081.1| hypothetical protein PC1_0489 [Pectobacterium carotovorum subsp. carotovorum PC1] gb|ACT11545.1| conserved hypothetical protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 275 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 137/278 (49%), Positives = 183/278 (65%), Gaps = 5/278 (1%) Query: 30 RLPRPALALASLALLAGCASDPDLVQRADALVAPAGLQREEVRGGPFVLTAYVHARPKAP 89 ++ R + ++LA+ GC SDP + AD + AGLQRE + PFVLT Y Sbjct: 2 KITRLLVLFSTLAI--GCTSDPQ--RHADEIAQVAGLQRETLPVSPFVLTTYTRITRTDR 57 Query: 90 LLRVYLEGDGRAWITRNQVSPDPTPHTAMGLRLAASD-GGDVVYLARPCQFTPMARNPIC 148 L +Y+EGDGRAW TRN + DPTP A+GL LAA+D +VVY+ARPCQFTP + NP C Sbjct: 58 PLNIYIEGDGRAWRTRNLPADDPTPRRALGLSLAAADRAANVVYIARPCQFTPSSVNPAC 117 Query: 149 QPEYWAGLRYSPLVVSAMDEALSRYVARLQPARLELVGFSGGGAIAVLLAARRKDVSAIR 208 QP+YW G R++P V++AMD A++ Y A++ + L G+SGGGA+AVL+AA+R D++ +R Sbjct: 118 QPDYWTGKRFAPEVITAMDRAITHYAAKVPTQSIVLTGYSGGGAVAVLVAAQRHDIALLR 177 Query: 209 TVAGNLDHVAVNQWHKVSQMPGSLNPIDVAAQVERIPQLHVSGAEDTVIPTAITHSFVDQ 268 TVAGNLDH AVN++H VS M GSLNP DVA QV IPQ H SG +D ++P + F Sbjct: 178 TVAGNLDHDAVNRFHGVSLMLGSLNPRDVAKQVAAIPQWHFSGEDDRIVPPFVAEHFARA 237 Query: 269 VGRCAGLMTVQGMAHQSDWDRLWPKLLAVPLPCAAKRP 306 VG CA + + G+ H+ DW LWP L+ + PC P Sbjct: 238 VGECAQVRRIPGVGHEGDWVSLWPSLINLRAPCRHSNP 275 >gb|AEG67602.1| esterase/lipase/thioesterase; protein [Ralstonia solanacearum Po82] Length = 300 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 148/274 (54%), Positives = 188/274 (68%), Gaps = 7/274 (2%) Query: 35 ALALASLALLAGCASDPDLVQR---ADALVAPAGLQREEVRGGPFVLTAYVH-ARPKAPL 90 A+ L+ + LL G S + R A+A A AGL RE++ G FVLTAY RP APL Sbjct: 15 AVGLSGMLLLTGLMSGCTALDRNAHAEAQAAAAGLHREQLDAGGFVLTAYARMTRPDAPL 74 Query: 91 LRVYLEGDGRAWITRNQVSPDPTPHTAMGLRLAASDGG-DVVYLARPCQFTPMARNPICQ 149 +Y+EGDG AWI+R++ S DPTP A+GL LA +D +VVY+ARPCQFTPMA NP C Sbjct: 75 -DLYIEGDGLAWISRSEPSQDPTPREAVGLALATADPAPNVVYVARPCQFTPMAMNPRCG 133 Query: 150 PEYWAGLRYSPLVVSAMDEALSRYVARLQPARLELVGFSGGGAIAVLLAARRKDVSAIRT 209 YW G R++P VV+++D+A+S + AR+ R+ L+G+SGGGA+AVL+AARR DV++IRT Sbjct: 134 VPYWTGKRFAPEVVASIDQAVSHFAARVPGQRIHLIGYSGGGALAVLVAARRTDVASIRT 193 Query: 210 VAGNLDHVAVNQWHKVSQMPGSLNPIDVAAQVERIPQLHVSGAEDTVIPTAITHSFVDQV 269 VAGNLDH VN+ H VS MP S N ID A QV IPQ+H SGA+DTV+P + FVD Sbjct: 194 VAGNLDHALVNRLHDVSAMPQSENAIDFAEQVASIPQVHFSGADDTVVPPIVAQRFVDAT 253 Query: 270 G-RCAGLMTVQGMAHQSDWDRLWPKLLAVPLPCA 302 G RCA TV G+ H DW RLWP+LL V C+ Sbjct: 254 GNRCAQARTVPGITHGGDWSRLWPRLLGVTPVCS 287 >ref|YP_004846125.1| hypothetical protein NH8B_0879 [Pseudogulbenkiania sp. NH8B] dbj|BAK75711.1| hypothetical protein NH8B_0879 [Pseudogulbenkiania sp. NH8B] Length = 286 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 150/264 (56%), Positives = 183/264 (69%), Gaps = 5/264 (1%) Query: 43 LLAGCASDPDLVQRADALVAPAGLQREEVRGGPFVLTAYVH-ARPKAPLLRVYLEGDGRA 101 LL GCA + D ADAL APAGL+RE V FVLTA+ H A+P PL VY+EGDG A Sbjct: 21 LLVGCA-ELDRNAHADALAAPAGLKRENVVTEQFVLTAFTHIAQPDQPL-TVYIEGDGLA 78 Query: 102 WITRNQVSPDPTPHTAMGLRLAASDGG-DVVYLARPCQFTPMARNPICQPEYWAGLRYSP 160 WITRN+ S DPTP A GL L A+D +VVYLARPCQFTPM NP C+ YW G R++P Sbjct: 79 WITRNEPSADPTPLAATGLALVAADPTPNVVYLARPCQFTPMELNPHCEVSYWTGKRFAP 138 Query: 161 LVVSAMDEALSRYVARLQPARLELVGFSGGGAIAVLLAARRKDVSAIRTVAGNLDHVAVN 220 VV++M+EA+S + +R+ + +VG+SGGGAIAVL+AARR DV++IRTVAGNLD VN Sbjct: 139 EVVASMNEAVSHFASRVPGQHINIVGYSGGGAIAVLIAARRTDVASIRTVAGNLDSEFVN 198 Query: 221 QWHKVSQMPGSLNPIDVAAQVERIPQLHVSGAEDTVIPTAITHSFVDQV-GRCAGLMTVQ 279 Q H VS MP S NPID A++V IPQ+H SG +D+V+P + FV GRCA TVQ Sbjct: 199 QLHHVSSMPESENPIDFASRVATIPQVHFSGTDDSVVPPEVAQRFVHATGGRCAQARTVQ 258 Query: 280 GMAHQSDWDRLWPKLLAVPLPCAA 303 + H SDW R WP LLA+ CA Sbjct: 259 DLTHNSDWGRQWPMLLAMAPVCAG 282 >ref|YP_003750298.1| thioesterase/hydrolase [Ralstonia solanacearum PSI07] emb|CBJ35675.1| putative thioesterase/hydrolase [Ralstonia solanacearum PSI07] Length = 279 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 146/259 (56%), Positives = 184/259 (71%), Gaps = 5/259 (1%) Query: 41 LALLAGCASDPDLVQRADALVAPAGLQREEVRGGPFVLTAYVH-ARPKAPLLRVYLEGDG 99 ++L++GC D A+A PAGL RE++ G FVLTAY ARP APL +Y+EGDG Sbjct: 4 MSLMSGCTV-LDRNAHAEAQATPAGLHREQLDTGGFVLTAYSRIARPDAPL-DLYIEGDG 61 Query: 100 RAWITRNQVSPDPTPHTAMGLRLAASDGG-DVVYLARPCQFTPMARNPICQPEYWAGLRY 158 AWI+R++ S DPTP A+GL LAA+D ++ YLARPCQFTPMA NP C YW G R+ Sbjct: 62 LAWISRSEPSLDPTPRDAVGLALAAADPAPNIAYLARPCQFTPMAMNPRCGVPYWTGKRF 121 Query: 159 SPLVVSAMDEALSRYVARLQPARLELVGFSGGGAIAVLLAARRKDVSAIRTVAGNLDHVA 218 +P VV+++D+A+S + AR+ R+ LVG+SGGGA+AVL+AARR DV++IRTVAGNLDH Sbjct: 122 APEVVASIDQAVSHFAARVPGQRIHLVGYSGGGALAVLVAARRTDVASIRTVAGNLDHAF 181 Query: 219 VNQWHKVSQMPGSLNPIDVAAQVERIPQLHVSGAEDTVIPTAITHSFVDQVG-RCAGLMT 277 VN+ H VS MP S N ID AA+V IPQ+H SGA+DTV+P + FVD G RCA T Sbjct: 182 VNRLHDVSSMPQSENAIDFAARVASIPQVHFSGADDTVVPPIVAQRFVDATGKRCAQART 241 Query: 278 VQGMAHQSDWDRLWPKLLA 296 V G+AH DW RLWP LL Sbjct: 242 VPGVAHGGDWSRLWPLLLG 260