BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5331.p (783 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777565.1| transcription accessory protein [Herbaspiril... 1436 0.0 ref|YP_001354953.1| Tex transcriptional accessory protein [Janth... 1293 0.0 ref|YP_004754565.1| putative polyribonucleotide nucleotidyltrans... 1291 0.0 ref|YP_001101248.1| putative polyribonucleotide nucleotidyltrans... 1258 0.0 ref|ZP_08273723.1| RNA binding S1 domain protein [Oxalobacterace... 1236 0.0 >ref|YP_003777565.1| transcription accessory protein [Herbaspirillum seropedicae SmR1] gb|ADJ65657.1| transcription accessory protein [Herbaspirillum seropedicae SmR1] Length = 783 Score = 1436 bits (3716), Expect = 0.0, Method: Composition-based stats. Identities = 772/783 (98%), Positives = 780/783 (99%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR Sbjct: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA Sbjct: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 Query: 121 GLTELADALLNDPALNPEEEAAKFLKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GLTELADALLNDP LNPEEEAAKF+KPAFTTDNGDNPGVPDTKAALDGARQILMERFSED Sbjct: 121 GLTELADALLNDPTLNPEEEAAKFIKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 Query: 181 AELLQSLREYITEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 AELLQSLREY+TEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE Sbjct: 181 AELLQSLREYLTEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 Query: 241 MLNVILRLDTEEEKPKWDAPHNPCEGRIASRFGVSNKGRPADKWLSDTVRWAWRVKVFMH 300 MLNVILRLD+EEEKPKWDAPHNPCEGRIASRFGVSNKGR ADKWLSDTVRWAWRVKVFMH Sbjct: 241 MLNVILRLDSEEEKPKWDAPHNPCEGRIASRFGVSNKGRAADKWLSDTVRWAWRVKVFMH 300 Query: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRSTMGLDPGLRTGVKVAIVDATGK 360 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPR+TMGLDPGLRTGVKVAIVDATGK Sbjct: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRATMGLDPGLRTGVKVAIVDATGK 360 Query: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL Sbjct: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 Query: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG Sbjct: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 Query: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG Sbjct: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 Query: 541 MFNSRAALREVPRLGDKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 MF+SRAALREVPRLG+KTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK Sbjct: 541 MFSSRAALREVPRLGEKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 Query: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL Sbjct: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 Query: 661 RVDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNSYVKDPHTVVKAGQVVKVKVLEV 720 R DMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSN+YVKDPHTVVKAGQVVKVKVLEV Sbjct: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTYVKDPHTVVKAGQVVKVKVLEV 720 Query: 721 DEKRKRIALTMRLNDTAPAPGARNEQRGDRTDSRRLSQHQNQRGREQAPSNNAMAAAFAK 780 DEKRKRIALTMRLNDTAPAPGARNEQRGDRTDSRRLSQHQNQRGREQAP+NNAMAAAFAK Sbjct: 721 DEKRKRIALTMRLNDTAPAPGARNEQRGDRTDSRRLSQHQNQRGREQAPANNAMAAAFAK 780 Query: 781 LRG 783 LRG Sbjct: 781 LRG 783 >ref|YP_001354953.1| Tex transcriptional accessory protein [Janthinobacterium sp. Marseille] gb|ABR89555.1| Tex transcriptional accessory protein [Janthinobacterium sp. Marseille] Length = 782 Score = 1293 bits (3347), Expect = 0.0, Method: Composition-based stats. Identities = 685/783 (87%), Positives = 738/783 (94%), Gaps = 1/783 (0%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIEQRLA+EL AKP+Q+AAA+ALLDEGATVPFIARYRKEVTGGLDD QLRLLEERLR Sbjct: 1 MLPSIEQRLAVELVAKPIQIAAAVALLDEGATVPFIARYRKEVTGGLDDTQLRLLEERLR 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELE RRAAI+ASIEEQ KMTP L+DAI HAEDKTRLEDLYLPYK KRRTKAQIA EA Sbjct: 61 YLRELEDRRAAIVASIEEQKKMTPELMDAIMHAEDKTRLEDLYLPYKQKRRTKAQIAVEA 120 Query: 121 GLTELADALLNDPALNPEEEAAKFLKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GLT LADALL +PALNPEEEAAK+LKPAFT + +NPGV DTKAALDGARQILMERF+ED Sbjct: 121 GLTPLADALLENPALNPEEEAAKYLKPAFTVEGVENPGVADTKAALDGARQILMERFAED 180 Query: 181 AELLQSLREYITEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 A LLQ+LREY+TEHG+VESKV+EGK+DAG KFADYFDYSET +TIPSHRALA+FRGRREE Sbjct: 181 AGLLQALREYLTEHGIVESKVVEGKEDAGAKFADYFDYSETIATIPSHRALAMFRGRREE 240 Query: 241 MLNVILRLDTEEEKPKWDAPHNPCEGRIASRFGVSNKGRPADKWLSDTVRWAWRVKVFMH 300 MLNV LRLD+EEEKPKWDAPHNPCEGRIASRFG+SN+GRPADKWL DTVRW WRVKVFMH Sbjct: 241 MLNVNLRLDSEEEKPKWDAPHNPCEGRIASRFGISNQGRPADKWLFDTVRWTWRVKVFMH 300 Query: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRSTMGLDPGLRTGVKVAIVDATGK 360 LETELMTNLREKAE EAINVFA NLK LLLAAPAGPR+TMGLDPGLRTGVKVA+VDATGK Sbjct: 301 LETELMTNLREKAEVEAINVFALNLKALLLAAPAGPRATMGLDPGLRTGVKVAVVDATGK 360 Query: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 VV T T+YPHQPRNDW+G+LHTL+QLAEKH V+LISIGNGTASRETDKLAQDLIK+RPEL Sbjct: 361 VVDTATVYPHQPRNDWDGTLHTLAQLAEKHKVALISIGNGTASRETDKLAQDLIKMRPEL 420 Query: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 KLTKIVVSEAGASVYSASEFAS+ELPD+DVS+RGAVSIARRLQDPLAELVKIDPKSIGVG Sbjct: 421 KLTKIVVSEAGASVYSASEFASRELPDMDVSIRGAVSIARRLQDPLAELVKIDPKSIGVG 480 Query: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 QYQHDV Q+QLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLN SVAQSIVSYRDMKG Sbjct: 481 QYQHDVGQTQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNNSVAQSIVSYRDMKG 540 Query: 541 MFNSRAALREVPRLGDKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 MF SRA LR VPRLGDKTFEQAAGFLRVM+G+NPLDASAVHPESYPLVEKILADIKKDVK Sbjct: 541 MFTSRADLRAVPRLGDKTFEQAAGFLRVMSGDNPLDASAVHPESYPLVEKILADIKKDVK 600 Query: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 S++G +LK LSPAKYADEKFG+PT+TDILKEL+KPGRDPRPEFTTATFK+GVEEI+DL Sbjct: 601 SIIGDEKMLKSLSPAKYADEKFGIPTITDILKELEKPGRDPRPEFTTATFKDGVEEIRDL 660 Query: 661 RVDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNSYVKDPHTVVKAGQVVKVKVLEV 720 R DMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSN++VKDPHTVVKAGQVVKVKVLEV Sbjct: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTFVKDPHTVVKAGQVVKVKVLEV 720 Query: 721 DEKRKRIALTMRLNDTAPAPGARNEQRGDRTDSRRLSQHQNQRGREQAPSNNAMAAAFAK 780 DEKRKRIALTMRL+D+AP G++ EQ+GDR DSRRLSQHQNQ+ R Q S +AMAAAFAK Sbjct: 721 DEKRKRIALTMRLSDSAPVAGSKPEQKGDRNDSRRLSQHQNQQSR-QPDSGSAMAAAFAK 779 Query: 781 LRG 783 L+G Sbjct: 780 LKG 782 >ref|YP_004754565.1| putative polyribonucleotide nucleotidyltransferase [Collimonas fungivorans Ter331] gb|AEK63742.1| putative Polyribonucleotide nucleotidyltransferase [Collimonas fungivorans Ter331] Length = 780 Score = 1291 bits (3342), Expect = 0.0, Method: Composition-based stats. Identities = 688/783 (87%), Positives = 730/783 (93%), Gaps = 3/783 (0%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIEQRLALELAAKPVQVAAA+ALLDEGATVPFIARYRKE TGGLDD+QLRLLEERLR Sbjct: 1 MLPSIEQRLALELAAKPVQVAAAVALLDEGATVPFIARYRKEATGGLDDIQLRLLEERLR 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELE RR AI+ASIEEQGKMTP LL AI+ AEDKTRLEDLYLPYK KRRTKAQIAAEA Sbjct: 61 YLRELEVRRGAILASIEEQGKMTPALLQAISLAEDKTRLEDLYLPYKLKRRTKAQIAAEA 120 Query: 121 GLTELADALLNDPALNPEEEAAKFLKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GLTELADALL +P LNPE+EA K+LKPAF+TDNGDNPGV D KAALDGARQILMERFSED Sbjct: 121 GLTELADALLGNPELNPEQEADKYLKPAFSTDNGDNPGVADAKAALDGARQILMERFSED 180 Query: 181 AELLQSLREYITEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 A LLQ+LREY+TEHGVVESKV++GKQDAGEKFADYFDYSET TIPSHRALALFRGRREE Sbjct: 181 AALLQALREYLTEHGVVESKVVDGKQDAGEKFADYFDYSETIGTIPSHRALALFRGRREE 240 Query: 241 MLNVILRLDTEEEKPKWDAPHNPCEGRIASRFGVSNKGRPADKWLSDTVRWAWRVKVFMH 300 +LNV+LRLDTEEEKPKWDAPHNPCEGRIA+RFG+SNK R ADKWLSDTVRW+WRVKVFMH Sbjct: 241 ILNVVLRLDTEEEKPKWDAPHNPCEGRIAARFGISNKNRSADKWLSDTVRWSWRVKVFMH 300 Query: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRSTMGLDPGLRTGVKVAIVDATGK 360 LETELMT LRE AE EAINVFARNLK LLLAAPAGPR+TMGLDPGLRTGVKVA++DATGK Sbjct: 301 LETELMTKLRETAEVEAINVFARNLKALLLAAPAGPRATMGLDPGLRTGVKVAVIDATGK 360 Query: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 VV T IYPHQPRNDW+GSLHTL+QLAEKH VSLISIGNGTASRETDKLAQDLIKLRPEL Sbjct: 361 VVDTTAIYPHQPRNDWDGSLHTLAQLAEKHKVSLISIGNGTASRETDKLAQDLIKLRPEL 420 Query: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 KLTKIVVSEAGASVYSASEFAS+ELPD+DVSLRGAVSIARRLQDPLAELVKIDPKSIGVG Sbjct: 421 KLTKIVVSEAGASVYSASEFASRELPDMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 Query: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 QYQHDV Q+QLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIV+YRDMKG Sbjct: 481 QYQHDVGQTQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVTYRDMKG 540 Query: 541 MFNSRAALREVPRLGDKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 MF SRA LREVPRLG+KTFEQAAGFLRVMN +NPLD SAVHPESYPLVEKILADIKKDVK Sbjct: 541 MFTSRAGLREVPRLGEKTFEQAAGFLRVMNSDNPLDGSAVHPESYPLVEKILADIKKDVK 600 Query: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 V+G LLK L+PAKYADEKFGVPT+ DILKEL+KPGRDPRPEFTTATFK+GVEEI+DL Sbjct: 601 GVIGDDKLLKSLNPAKYADEKFGVPTIADILKELEKPGRDPRPEFTTATFKDGVEEIRDL 660 Query: 661 RVDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNSYVKDPHTVVKAGQVVKVKVLEV 720 R DMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSN++VKDPH+VVKAGQVVKVKVLEV Sbjct: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTFVKDPHSVVKAGQVVKVKVLEV 720 Query: 721 DEKRKRIALTMRLNDTAPAPGARNEQRGDRTDSRRLSQHQNQRGREQAPSNNAMAAAFAK 780 DEKRKRIALTMRL D AP GA+ EQR DR D++RLSQ Q+ AP N AMAAAFAK Sbjct: 721 DEKRKRIALTMRLTDNAPVAGAKPEQRADRNDAKRLSQ---QKQAAPAPVNGAMAAAFAK 777 Query: 781 LRG 783 L+G Sbjct: 778 LKG 780 >ref|YP_001101248.1| putative polyribonucleotide nucleotidyltransferase [Herminiimonas arsenicoxydans] emb|CAL63127.1| putative transcription accessory protein TEX [Herminiimonas arsenicoxydans] Length = 780 Score = 1258 bits (3254), Expect = 0.0, Method: Composition-based stats. Identities = 682/783 (87%), Positives = 728/783 (92%), Gaps = 3/783 (0%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIEQRLA+ELAAKP QVAAAI LLDEGATVPFI+RYRKE TGGLDD+QLRLLEERLR Sbjct: 1 MLPSIEQRLAVELAAKPAQVAAAITLLDEGATVPFISRYRKEATGGLDDIQLRLLEERLR 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELE RRAAI+ASIEEQ KMTP LLDAI HAEDKTRLEDLYLPYK KRRTKAQIA EA Sbjct: 61 YLRELEDRRAAIVASIEEQNKMTPTLLDAIMHAEDKTRLEDLYLPYKQKRRTKAQIAVEA 120 Query: 121 GLTELADALLNDPALNPEEEAAKFLKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GLT LADALL DP LNPEEEAAK+LKPAFT + DNPGV DTKAALDGARQILMERF+ED Sbjct: 121 GLTPLADALLADPTLNPEEEAAKYLKPAFTVEGIDNPGVADTKAALDGARQILMERFAED 180 Query: 181 AELLQSLREYITEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 A LLQ+LREY+TEHG+VESKV+EGKQDAGEKFADYFDYSET +TIPSHRALA+FRGRREE Sbjct: 181 ATLLQALREYLTEHGIVESKVVEGKQDAGEKFADYFDYSETIATIPSHRALAMFRGRREE 240 Query: 241 MLNVILRLDTEEEKPKWDAPHNPCEGRIASRFGVSNKGRPADKWLSDTVRWAWRVKVFMH 300 MLNV LRLDTEEEKPKWDAP NPCE RIA+RFG+SN+GR ADKWL+DTVRW WRVK FMH Sbjct: 241 MLNVNLRLDTEEEKPKWDAPLNPCESRIAARFGISNQGRAADKWLADTVRWTWRVKTFMH 300 Query: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRSTMGLDPGLRTGVKVAIVDATGK 360 LETELMTNLREKAE EAINVFA NLK LLLAAPAGPR+TMGLDPGLRTGVKVA+VDATGK Sbjct: 301 LETELMTNLREKAEVEAINVFALNLKALLLAAPAGPRATMGLDPGLRTGVKVAVVDATGK 360 Query: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 VV T T+YPHQPRNDW+G+LHTLSQLAEKH V+LISIGNGTASRETDKLAQDLIKLRPEL Sbjct: 361 VVDTATVYPHQPRNDWDGTLHTLSQLAEKHKVALISIGNGTASRETDKLAQDLIKLRPEL 420 Query: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 KLTKIVVSEAGASVYSASEFAS+ELPD+DVS+RGAVSIARRLQDPLAELVKIDPKSIGVG Sbjct: 421 KLTKIVVSEAGASVYSASEFASRELPDMDVSIRGAVSIARRLQDPLAELVKIDPKSIGVG 480 Query: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 QYQHDV Q+QLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGL++SVAQSIVSYRD KG Sbjct: 481 QYQHDVGQTQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLSSSVAQSIVSYRDTKG 540 Query: 541 MFNSRAALREVPRLGDKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 MF SRA LR VPRLGDKTFEQAAGFLRVM G+NPLDASAVHPESYPLVEKILADIKKDVK Sbjct: 541 MFTSRADLRAVPRLGDKTFEQAAGFLRVMAGDNPLDASAVHPESYPLVEKILADIKKDVK 600 Query: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 S++G LLK L+PAKYADEKFGVPT+TDILKEL+KPGRDPRPEFTTATFK+GVEEI+DL Sbjct: 601 SIIGDDKLLKSLNPAKYADEKFGVPTITDILKELEKPGRDPRPEFTTATFKDGVEEIRDL 660 Query: 661 RVDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNSYVKDPHTVVKAGQVVKVKVLEV 720 R DMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSN++VKDPHTVVKAGQVVKVKVLEV Sbjct: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTFVKDPHTVVKAGQVVKVKVLEV 720 Query: 721 DEKRKRIALTMRLNDTAPAPGARNEQRGDRTDSRRLSQHQNQRGREQAPSNNAMAAAFAK 780 DEKRKRIALTMRL+D AP G++ EQR DR DS+RL+QHQ R A S +AMAAAFAK Sbjct: 721 DEKRKRIALTMRLSDAAPVAGSKPEQRADRNDSKRLAQHQQ---RPAADSGSAMAAAFAK 777 Query: 781 LRG 783 L+G Sbjct: 778 LKG 780 >ref|ZP_08273723.1| RNA binding S1 domain protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32801.1| RNA binding S1 domain protein [Oxalobacteraceae bacterium IMCC9480] Length = 781 Score = 1236 bits (3198), Expect = 0.0, Method: Composition-based stats. Identities = 653/762 (85%), Positives = 712/762 (93%) Query: 1 MLPSIEQRLALELAAKPVQVAAAIALLDEGATVPFIARYRKEVTGGLDDVQLRLLEERLR 60 MLPSIEQRLALEL A+P QVAAAIALLDEGATVPFIARYRKE TGGLDD+QLRLLEERLR Sbjct: 1 MLPSIEQRLALELVARPAQVAAAIALLDEGATVPFIARYRKEATGGLDDIQLRLLEERLR 60 Query: 61 YLRELESRRAAIIASIEEQGKMTPVLLDAITHAEDKTRLEDLYLPYKPKRRTKAQIAAEA 120 YLRELE+RR+AI+++IEEQ KMTP LLD I HAEDKTRLEDLYLP+K KRRTKAQIAAEA Sbjct: 61 YLRELEARRSAIVSAIEEQNKMTPALLDMILHAEDKTRLEDLYLPFKLKRRTKAQIAAEA 120 Query: 121 GLTELADALLNDPALNPEEEAAKFLKPAFTTDNGDNPGVPDTKAALDGARQILMERFSED 180 GLTELADALL DP L+PE AA +LKPAF+TD+GDNPGV DTKAALDGARQILMERF+ED Sbjct: 121 GLTELADALLADPQLDPEVAAAAYLKPAFSTDSGDNPGVVDTKAALDGARQILMERFAED 180 Query: 181 AELLQSLREYITEHGVVESKVIEGKQDAGEKFADYFDYSETYSTIPSHRALALFRGRREE 240 A LLQ+LREY+TEHG+VESKVI+G+QDAG KFADYFDYSET TIPSHRALALFRGRREE Sbjct: 181 ATLLQALREYLTEHGIVESKVIDGQQDAGAKFADYFDYSETLGTIPSHRALALFRGRREE 240 Query: 241 MLNVILRLDTEEEKPKWDAPHNPCEGRIASRFGVSNKGRPADKWLSDTVRWAWRVKVFMH 300 ML V+LRLDTE EKPKWDAPHNPCEGRIA+RFGV ++ RPADKWL+DTVRWAWRVKVFMH Sbjct: 241 MLTVLLRLDTEPEKPKWDAPHNPCEGRIAARFGVRHQNRPADKWLADTVRWAWRVKVFMH 300 Query: 301 LETELMTNLREKAEAEAINVFARNLKDLLLAAPAGPRSTMGLDPGLRTGVKVAIVDATGK 360 LETELMT LRE+AE EAINVFA NLK LLLAAPAG +TMGLDPGLRTGVKVA+VDATGK Sbjct: 301 LETELMTGLRERAEVEAINVFALNLKALLLAAPAGQHATMGLDPGLRTGVKVAVVDATGK 360 Query: 361 VVATDTIYPHQPRNDWNGSLHTLSQLAEKHNVSLISIGNGTASRETDKLAQDLIKLRPEL 420 VV T TIYPHQPRNDW+GSLHTL+QLAEKH V+LISIGNGTASRETDKLAQDLIKLRPEL Sbjct: 361 VVDTSTIYPHQPRNDWDGSLHTLAQLAEKHKVTLISIGNGTASRETDKLAQDLIKLRPEL 420 Query: 421 KLTKIVVSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 480 K+TKIVVSEAGASVYSASEFAS+ELPD+DVS+RGAVSIARRLQDPLAELVKIDPKSIGVG Sbjct: 421 KMTKIVVSEAGASVYSASEFASRELPDMDVSIRGAVSIARRLQDPLAELVKIDPKSIGVG 480 Query: 481 QYQHDVSQSQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNASVAQSIVSYRDMKG 540 QYQHDV Q+QLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGL++SVAQSIV+YRD+KG Sbjct: 481 QYQHDVGQTQLARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLSSSVAQSIVTYRDLKG 540 Query: 541 MFNSRAALREVPRLGDKTFEQAAGFLRVMNGENPLDASAVHPESYPLVEKILADIKKDVK 600 F SRAALR+VPRLGDKTFEQAAGFLRVM +NPLDASAVHPESY LV+KILADI+KDVK Sbjct: 541 AFTSRAALRDVPRLGDKTFEQAAGFLRVMGSDNPLDASAVHPESYALVQKILADIQKDVK 600 Query: 601 SVLGQTSLLKGLSPAKYADEKFGVPTVTDILKELDKPGRDPRPEFTTATFKEGVEEIKDL 660 +V+G LLK L+PA+YAD+ FGVPT+TDILKEL+KPGRDPRPEFTTATFKEGVE ++DL Sbjct: 601 AVIGDERLLKSLNPARYADDTFGVPTITDILKELEKPGRDPRPEFTTATFKEGVEALRDL 660 Query: 661 RVDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNSYVKDPHTVVKAGQVVKVKVLEV 720 R DMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSN++VKDPH+VVKAGQVV+VKVLEV Sbjct: 661 RPDMILEGVVTNVAAFGAFVDIGVHQDGLVHISALSNTFVKDPHSVVKAGQVVRVKVLEV 720 Query: 721 DEKRKRIALTMRLNDTAPAPGARNEQRGDRTDSRRLSQHQNQ 762 DEKRKRIALTMRL D+AP GA+ EQRGDR D++RLSQHQ Q Sbjct: 721 DEKRKRIALTMRLTDSAPVAGAKVEQRGDRNDAKRLSQHQQQ 762