BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5325.p (251 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777564.1| hypothetical protein Hsero_4186 [Herbaspiril... 282 3e-74 gb|EGW61159.1| hypothetical protein DsuiDRAFT_02111 [Dechlorosom... 127 2e-27 ref|YP_545677.1| hypothetical protein Mfla_1568 [Methylobacillus... 118 8e-25 ref|YP_926540.1| hypothetical protein Sama_0662 [Shewanella amaz... 117 1e-24 ref|ZP_08780874.1| hypothetical protein Mettu_1887 [Methylobacte... 116 3e-24 >ref|YP_003777564.1| hypothetical protein Hsero_4186 [Herbaspirillum seropedicae SmR1] gb|ADJ65656.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 247 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 187/251 (74%), Positives = 211/251 (84%), Gaps = 4/251 (1%) Query: 1 MAIGNTSVVDNKSLLPVTPSSTSSTSAAASDNDKLPATAGDSSSGDKIAQAKQANLLTVS 60 MAIGN + VD KSLLP T S + + S++D+ A A + DKIA+AK+ANLLT + Sbjct: 1 MAIGNNNGVDTKSLLPST-KLPSVNAGSTSESDRQSANAASPAVSDKIAEAKKANLLTEA 59 Query: 61 GAKAQFNLSIVQSSLEVSLQTQNDPLSLVYKTAIENINDILRPQLGDNAIQTASTQDNSP 120 GAKAQFNLSIVQ+SLEVSLQTQNDPLSLVYKTAIENIND+LRPQLGDNAIQ ++QDN+P Sbjct: 60 GAKAQFNLSIVQASLEVSLQTQNDPLSLVYKTAIENINDVLRPQLGDNAIQNTASQDNTP 119 Query: 121 EATAGRIVSFITNMFELYKKNNPDKEDSSNIDDYMNLIFKGVDQGFKEARGILESLNVLQ 180 EATAGRIVSFITNMF+L+KKNNPDK+DSSNIDDYM LIFKGVDQGFKEARGILESL+VLQ Sbjct: 120 EATAGRIVSFITNMFDLFKKNNPDKDDSSNIDDYMKLIFKGVDQGFKEARGILESLSVLQ 179 Query: 181 GDIASNIDKTYDLVQKALGDFINKVKGGKQEGEDGAGSEGNADGQGGTLTASETTVSISV 240 GDIA NIDKTYDLVQK+L DFINKVKG K + E+G G GT+ ASETTVSIS+ Sbjct: 180 GDIADNIDKTYDLVQKSLNDFINKVKGAKPDTEEGQGQNDGQG---GTVVASETTVSISI 236 Query: 241 SVSQTRISTSA 251 SVSQTRISTSA Sbjct: 237 SVSQTRISTSA 247 >gb|EGW61159.1| hypothetical protein DsuiDRAFT_02111 [Dechlorosoma suillum PS] Length = 201 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 70/174 (40%), Positives = 114/174 (65%) Query: 38 TAGDSSSGDKIAQAKQANLLTVSGAKAQFNLSIVQSSLEVSLQTQNDPLSLVYKTAIENI 97 TA +S ++ ++ L V A QF + I++S+L+VS+Q ND +L+++TAI+ I Sbjct: 15 TASANSGNSRVYPQEEHRALKVDTATKQFKVGILESALQVSIQAGNDSQALLFRTAIDRI 74 Query: 98 NDILRPQLGDNAIQTASTQDNSPEATAGRIVSFITNMFELYKKNNPDKEDSSNIDDYMNL 157 N++L G +A+Q A++QDNSPEATA RI+SF T ++ Y PD + D++++ Sbjct: 75 NEVLGISEGPDALQKAASQDNSPEATAARILSFTTGLYAAYAAKRPDDDPEQVASDFVDV 134 Query: 158 IFKGVDQGFKEARGILESLNVLQGDIASNIDKTYDLVQKALGDFINKVKGGKQE 211 I G ++GF EA+ IL+ LNVL G++ + I+KTY LVQK + DF+ +++ K+E Sbjct: 135 IRSGFEKGFNEAKDILKGLNVLNGEVEAGINKTYQLVQKGMDDFLAQLRKPKEE 188 >ref|YP_545677.1| hypothetical protein Mfla_1568 [Methylobacillus flagellatus KT] gb|ABE49836.1| conserved hypothetical protein [Methylobacillus flagellatus KT] Length = 193 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 77/185 (41%), Positives = 115/185 (62%), Gaps = 4/185 (2%) Query: 29 ASDNDKLPATAGDSSSGDKIAQAKQANLLTVSGAKAQFNLSIVQSSLEVSLQTQNDPLSL 88 A N+ +TAG ++ + +++AK+A G K N I+Q+SL+VS+Q+ ND L+L Sbjct: 3 APSNNIANSTAGPAN--EALSEAKKAAEARPDGQKTMLNAKILQASLKVSIQSGNDGLAL 60 Query: 89 VYKTAIENINDILRPQLGDNAIQTASTQDNSPEATAGRIVSFITNMFELYKKNNPDKEDS 148 +Y++AIE+IN +L PQLG NAI A D+S EATAGRI+S T F+ Y +PD++ Sbjct: 61 LYRSAIEHINAVLEPQLGANAIGNAMAGDHSAEATAGRILSMSTGFFDAYAARHPDQDPE 120 Query: 149 SNIDDYMNLIFKGVDQGFKEARGILESLNVL--QGDIASNIDKTYDLVQKALGDFINKVK 206 + D++ LI G ++G+ EA+ IL L VL DIA++I TY LVQK DF+ + Sbjct: 121 EVVRDFVALIRGGFEKGYAEAKDILAGLGVLGEGSDIAADIANTYALVQKGYDDFLEAKQ 180 Query: 207 GGKQE 211 +E Sbjct: 181 SAIRE 185 >ref|YP_926540.1| hypothetical protein Sama_0662 [Shewanella amazonensis SB2B] gb|ABL98870.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 202 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 113/204 (55%), Gaps = 8/204 (3%) Query: 16 PVTPSSTSSTSAAASDNDKLPATAGDSSSGDKIAQAKQANLLTVSGAKAQFNLSIVQSSL 75 P P+ ++ S A D + + +Q A+ ++A N +I+ + Sbjct: 5 PPQPNHGATVSQVAKDKSPVAGKNHGETVAVVASQKTAAH-----SSRALMNAAILSAQQ 59 Query: 76 EVSLQTQNDPLSLVYKTAIENINDILRPQLGDNAIQTASTQ--DNSPEATAGRIVSFITN 133 EV+L ++P+ L+Y+ AIE IN+ L P +G+ AI+ + + D SPEATAGRIV F T Sbjct: 60 EVNLSAADEPMVLLYRAAIEAINEQLAPTMGEQAIERLAEEGVDTSPEATAGRIVDFATQ 119 Query: 134 MFELYKKNNPDKEDSSNIDDYMNLIFKGVDQGFKEARGILESLNVLQGDIASNIDKTYDL 193 F LY+ N + ++ +M +I +DQGFKEAR IL L VL+GDIA +D+TY L Sbjct: 120 FFSLYQSQNSSQPLEQQLEGFMGVIGGAIDQGFKEARDILSGLKVLEGDIADGVDRTYAL 179 Query: 194 VQKALGDFINKVKGGKQEGEDGAG 217 VQ+ L DF K+ +E E AG Sbjct: 180 VQQGLKDFAQKMNPQSKE-ESAAG 202 >ref|ZP_08780874.1| hypothetical protein Mettu_1887 [Methylobacter tundripaludum SV96] gb|EGW23049.1| hypothetical protein Mettu_1887 [Methylobacter tundripaludum SV96] Length = 208 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 86/205 (41%), Positives = 120/205 (58%), Gaps = 10/205 (4%) Query: 19 PSSTSSTSAAASDNDKLPATAGDSSSGDKIAQAKQANLLTVSGA---KAQFNLSIVQSSL 75 PSS + +A + +P+ S A K+A+ + S A K Q N SI+Q+S+ Sbjct: 8 PSSYTVNAAKTTKQAGVPSDIHVSEQ----AHTKKADDVQDSAAVTTKKQLNQSILQASM 63 Query: 76 EVSLQTQNDPLSLVYKTAIENINDILRPQLGDNAIQTASTQ--DNSPEATAGRIVSFITN 133 +VSL N P+ L++KTAIE +N L QLG NAIQ A D SP+ATA RIV T Sbjct: 64 DVSLSAGNQPMVLLFKTAIEGVNKALEGQLGPNAIQHAYEDGLDVSPQATADRIVQMSTA 123 Query: 134 MFELYKKNNPDKEDSSNIDDYMNLIFKGVDQGFKEARGILESLNVL-QGDIASNIDKTYD 192 F+ Y+ ++PD + + +I G+D+GFK+AR ILE LNVL +G+IA+NID TYD Sbjct: 124 FFDKYQASHPDLSTEDALSSFTKVISGGIDKGFKDARDILEGLNVLKEGNIANNIDATYD 183 Query: 193 LVQKALGDFINKVKGGKQEGEDGAG 217 LVQK L F++ K +Q D + Sbjct: 184 LVQKGLQAFVDNYKKPEQTKSDASA 208