BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5314.p (282 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777555.1| PP-loop superfamily ATPase [Herbaspirillum s... 464 e-129 ref|YP_004754661.1| queuosine Biosynthesis queC ATPase [Collimon... 410 e-112 ref|YP_001354876.1| ExsB protein [Janthinobacterium sp. Marseill... 403 e-110 ref|YP_001101172.1| regulatory protein [Herminiimonas arsenicoxy... 400 e-110 ref|ZP_08275781.1| Queuosine Biosynthesis QueC ATPase [Oxalobact... 390 e-106 >ref|YP_003777555.1| PP-loop superfamily ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65647.1| PP-loop superfamily ATPase protein [Herbaspirillum seropedicae SmR1] Length = 263 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 224/241 (92%), Positives = 232/241 (96%) Query: 40 TPAIAPTLSTQSALVLFSGGQDSTTCLAWALSRYQRVETIGFDYGQRHAIELEVRPALLE 99 +P++APTL+TQSALVLFSGGQDSTTCLAWALSRYQRVETIGFDYGQRHAIEL VRPALLE Sbjct: 21 SPSLAPTLNTQSALVLFSGGQDSTTCLAWALSRYQRVETIGFDYGQRHAIELAVRPALLE 80 Query: 100 KMKAFSPEWQARLGEDHMIDLSLIGKISDTALTRDVAIAMQDNGLPNTFVPGRNLLFMTV 159 +M+AFSP+WQ RLGEDHMIDLSLIGKISDTALTRDV IAMQDNGLPNTFVPGRNLLFMTV Sbjct: 81 RMRAFSPDWQTRLGEDHMIDLSLIGKISDTALTRDVEIAMQDNGLPNTFVPGRNLLFMTV 140 Query: 160 AATLAYRRGLNVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKA 219 AATLAYRRGLNVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKA Sbjct: 141 AATLAYRRGLNVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKA 200 Query: 220 ETWSLAESLGGTALVDLIRADTHTCYLGERGQLHDWGHGCGKCPACELRARGYQQYAARK 279 TW+LAE LGG LVDLIR DTHTCYLGERG LHDWGHGCGKCPACELRARGYQQYAARK Sbjct: 201 GTWALAELLGGAPLVDLIRTDTHTCYLGERGALHDWGHGCGKCPACELRARGYQQYAARK 260 Query: 280 S 280 S Sbjct: 261 S 261 >ref|YP_004754661.1| queuosine Biosynthesis queC ATPase [Collimonas fungivorans Ter331] gb|AAT42387.1| putative PP-loop superfamily ATPase [Collimonas fungivorans Ter331] gb|AEK63838.1| Queuosine Biosynthesis QueC ATPase [Collimonas fungivorans Ter331] Length = 236 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 188/224 (83%), Positives = 207/224 (92%) Query: 52 ALVLFSGGQDSTTCLAWALSRYQRVETIGFDYGQRHAIELEVRPALLEKMKAFSPEWQAR 111 A+VLFSGGQDSTTCLAWALSRY+RVETIGFDYGQRHA+EL VRP LL+K++A P+W + Sbjct: 7 AIVLFSGGQDSTTCLAWALSRYERVETIGFDYGQRHAVELTVRPVLLQKIRAQFPQWAGK 66 Query: 112 LGEDHMIDLSLIGKISDTALTRDVAIAMQDNGLPNTFVPGRNLLFMTVAATLAYRRGLNV 171 LGEDH+IDLSLI KIS TA+T DV I MQ+NGLPNTFVPGRNLLFMTVAAT+AYRRGLNV Sbjct: 67 LGEDHLIDLSLISKISSTAMTEDVEIVMQENGLPNTFVPGRNLLFMTVAATVAYRRGLNV 126 Query: 172 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKAETWSLAESLGGT 231 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQ+K+ETPLMWIDK+ETW LA+ LGG Sbjct: 127 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQIKLETPLMWIDKSETWKLAQDLGGD 186 Query: 232 ALVDLIRADTHTCYLGERGQLHDWGHGCGKCPACELRARGYQQY 275 ALVDLIRADTHTCYLG+RG LHDWG+GCG CPAC LRARGYQQ+ Sbjct: 187 ALVDLIRADTHTCYLGQRGALHDWGYGCGTCPACALRARGYQQF 230 >ref|YP_001354876.1| ExsB protein [Janthinobacterium sp. Marseille] sp|A6T2X9|QUEC_JANMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein QueC gb|ABR89782.1| ExsB protein [Janthinobacterium sp. Marseille] Length = 235 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 185/232 (79%), Positives = 207/232 (89%) Query: 48 STQSALVLFSGGQDSTTCLAWALSRYQRVETIGFDYGQRHAIELEVRPALLEKMKAFSPE 107 S ALVLFSGGQDSTTC+AWAL RY +VETIGFDYGQRHA+ELEVRP +L ++ +PE Sbjct: 3 SADGALVLFSGGQDSTTCVAWALKRYAKVETIGFDYGQRHAVELEVRPDVLRSLRDINPE 62 Query: 108 WQARLGEDHMIDLSLIGKISDTALTRDVAIAMQDNGLPNTFVPGRNLLFMTVAATLAYRR 167 W +LGEDHMIDLSLI KIS+TA+T+DV I M +NGLPNTFVPGRNLLFMTVAAT+AYRR Sbjct: 63 WNKKLGEDHMIDLSLISKISNTAMTQDVEITMMENGLPNTFVPGRNLLFMTVAATVAYRR 122 Query: 168 GLNVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKAETWSLAES 227 GL+VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMAT+LK+ETPLMWIDKAETW +A+ Sbjct: 123 GLDVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATRLKLETPLMWIDKAETWKMAQD 182 Query: 228 LGGTALVDLIRADTHTCYLGERGQLHDWGHGCGKCPACELRARGYQQYAARK 279 LGG LVDLIRA THTCYLGERG LHDWG+GCG CPACELRARGY +AA++ Sbjct: 183 LGGKPLVDLIRAGTHTCYLGERGALHDWGYGCGTCPACELRARGYANFAAQE 234 >ref|YP_001101172.1| regulatory protein [Herminiimonas arsenicoxydans] sp|A4G964|QUEC_HERAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein QueC emb|CAL63051.1| Queuosine biosynthesis protein QueC [Herminiimonas arsenicoxydans] Length = 233 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 187/230 (81%), Positives = 204/230 (88%) Query: 48 STQSALVLFSGGQDSTTCLAWALSRYQRVETIGFDYGQRHAIELEVRPALLEKMKAFSPE 107 S SALVLFSGGQDSTTCLAWAL+ Y RVETIGFDYGQRHAIEL VRP LLEKM+ SPE Sbjct: 3 SANSALVLFSGGQDSTTCLAWALTHYARVETIGFDYGQRHAIELAVRPFLLEKMRLISPE 62 Query: 108 WQARLGEDHMIDLSLIGKISDTALTRDVAIAMQDNGLPNTFVPGRNLLFMTVAATLAYRR 167 W RLG DHMIDLSLI KIS+TALT +V IAM +NGLPNTFVPGRNLLFMTVAAT+AYRR Sbjct: 63 WDGRLGADHMIDLSLIAKISNTALTSNVEIAMLENGLPNTFVPGRNLLFMTVAATVAYRR 122 Query: 168 GLNVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKAETWSLAES 227 GL+VLVGGMCETDFSGYPDCRDDTMKALQV LNLGMAT+LKVETPLMWIDKA TW +A+ Sbjct: 123 GLDVLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMATKLKVETPLMWIDKAATWKMAQD 182 Query: 228 LGGTALVDLIRADTHTCYLGERGQLHDWGHGCGKCPACELRARGYQQYAA 277 LGGT L++L+R THTCYLGERG+LHDWG+GCG CPAC+LRARGY + A Sbjct: 183 LGGTPLLNLVRTGTHTCYLGERGELHDWGYGCGNCPACKLRARGYADFIA 232 >ref|ZP_08275781.1| Queuosine Biosynthesis QueC ATPase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30744.1| Queuosine Biosynthesis QueC ATPase [Oxalobacteraceae bacterium IMCC9480] Length = 235 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 185/228 (81%), Positives = 201/228 (88%) Query: 52 ALVLFSGGQDSTTCLAWALSRYQRVETIGFDYGQRHAIELEVRPALLEKMKAFSPEWQAR 111 ALVLFSGGQDSTTC+AWAL RY RVETIGFDYGQRHAIE+ VRP +L ++ SP+W R Sbjct: 7 ALVLFSGGQDSTTCVAWALQRYARVETIGFDYGQRHAIEMTVRPDVLASLRTQSPDWDHR 66 Query: 112 LGEDHMIDLSLIGKISDTALTRDVAIAMQDNGLPNTFVPGRNLLFMTVAATLAYRRGLNV 171 LGEDH+IDLSLIGKISDTALT +V IAM +NGLPNTFVPGRNLLFM VAATLAYRRGL+V Sbjct: 67 LGEDHVIDLSLIGKISDTALTSNVEIAMLENGLPNTFVPGRNLLFMMVAATLAYRRGLDV 126 Query: 172 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKAETWSLAESLGGT 231 LVGGMCETDFSGYPDCRDDTMKALQV LNLGMAT+LK+ETPLMWIDKA TW+LAESLGG Sbjct: 127 LVGGMCETDFSGYPDCRDDTMKALQVTLNLGMATRLKLETPLMWIDKAATWALAESLGGD 186 Query: 232 ALVDLIRADTHTCYLGERGQLHDWGHGCGKCPACELRARGYQQYAARK 279 LVDLIR THTCYLGERG LHDWG+GCG CPAC LRA+GY Y R+ Sbjct: 187 TLVDLIRTGTHTCYLGERGALHDWGYGCGTCPACALRAKGYAGYRQRE 234