BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5308.p (293 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777550.1| hypothetical protein Hsero_4172 [Herbaspiril... 553 e-155 ref|YP_001354863.1| hypothetical protein mma_3173 [Janthinobacte... 525 e-147 ref|YP_001101159.1| hypothetical protein HEAR2925 [Herminiimonas... 518 e-145 ref|ZP_08273185.1| LSU ribosomal protein L17p [Oxalobacteraceae ... 516 e-144 ref|YP_004754656.1| 50S ribosomal protein L17p [Collimonas fungi... 516 e-144 >ref|YP_003777550.1| hypothetical protein Hsero_4172 [Herbaspirillum seropedicae SmR1] gb|ADJ65642.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 284 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 274/284 (96%), Positives = 277/284 (97%) Query: 1 MLYPELFKSLEQVRWNMDKDIPWDKFDASLLTDEQAQTIRMNAITEWSALPATEMFLRDN 60 MLYPELFKSLEQVRWNMDKDIPWDKFDASLLTDEQAQTIRMNAITEWSALPATEMFLRDN Sbjct: 1 MLYPELFKSLEQVRWNMDKDIPWDKFDASLLTDEQAQTIRMNAITEWSALPATEMFLRDN 60 Query: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPDLCPTEEELHNVRFEFDPAPPLETLML 120 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPD+CPTEEELHNVRFEFDPAPPLETLML Sbjct: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPDMCPTEEELHNVRFEFDPAPPLETLML 120 Query: 121 HFCGEIRLNHWYRCAADWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALNEVGDKARAA 180 HFCGEIRLNHWYRCAADWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALNEVGDKARAA Sbjct: 121 HFCGEIRLNHWYRCAADWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALNEVGDKARAA 180 Query: 181 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLERWLDNQIKFDGEWE 240 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLERWLDNQIKFDGEWE Sbjct: 181 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLERWLDNQIKFDGEWE 240 Query: 241 KKVVDRILHNMSLLFERTFSNVQELNRYRKEIVTRMAPPVRPAA 284 KKVVDRILHNMSLLFERTFSNVQELNRYRKE+ R+ P AA Sbjct: 241 KKVVDRILHNMSLLFERTFSNVQELNRYRKEVTQRILPSGAAAA 284 >ref|YP_001354863.1| hypothetical protein mma_3173 [Janthinobacterium sp. Marseille] gb|ABR91148.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 282 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 260/277 (93%), Positives = 266/277 (96%) Query: 1 MLYPELFKSLEQVRWNMDKDIPWDKFDASLLTDEQAQTIRMNAITEWSALPATEMFLRDN 60 MLYPELFKSLEQVRWNM+KDIPWD+FD S LTDEQAQTIRMNAITEWSALPATEMFLRDN Sbjct: 1 MLYPELFKSLEQVRWNMEKDIPWDQFDGSKLTDEQAQTIRMNAITEWSALPATEMFLRDN 60 Query: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPDLCPTEEELHNVRFEFDPAPPLETLML 120 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRP+ PTEEELHNVRFEFDPAP LETLM+ Sbjct: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPEYVPTEEELHNVRFEFDPAPALETLMM 120 Query: 121 HFCGEIRLNHWYRCAADWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALNEVGDKARAA 180 HFCGEIRLNHWYRCA+DWHTEPVIKQIYKIISQDEARHGGAYLRYMKKAL EVGD ARAA Sbjct: 121 HFCGEIRLNHWYRCASDWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALVEVGDSARAA 180 Query: 181 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLERWLDNQIKFDGEWE 240 FAKIGVLMASARRTEKPLHPTNLHVNQ+LFPNDTVQSRLPDPEWLERWLD QIKFD EWE Sbjct: 181 FAKIGVLMASARRTEKPLHPTNLHVNQSLFPNDTVQSRLPDPEWLERWLDGQIKFDSEWE 240 Query: 241 KKVVDRILHNMSLLFERTFSNVQELNRYRKEIVTRMA 277 KKVVDRILHNMSLLFERTF VQELNRYRKEIVTRMA Sbjct: 241 KKVVDRILHNMSLLFERTFGTVQELNRYRKEIVTRMA 277 >ref|YP_001101159.1| hypothetical protein HEAR2925 [Herminiimonas arsenicoxydans] emb|CAL63038.1| Conserved hypothetical protein, putative ferritin/ribonucleotide reductase [Herminiimonas arsenicoxydans] Length = 284 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 255/277 (92%), Positives = 265/277 (95%) Query: 1 MLYPELFKSLEQVRWNMDKDIPWDKFDASLLTDEQAQTIRMNAITEWSALPATEMFLRDN 60 MLYPELFKSLEQVRWNM+ DIPWD+FD S LTDEQAQTIRMNAITEWSALPATEMFLRDN Sbjct: 1 MLYPELFKSLEQVRWNMETDIPWDQFDGSKLTDEQAQTIRMNAITEWSALPATEMFLRDN 60 Query: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPDLCPTEEELHNVRFEFDPAPPLETLML 120 R DSDF AFMSVWFFEEQKHSLVLMEYLRRF+P+ PTEEELHNVRFEFDPAP LETLM+ Sbjct: 61 RDDSDFCAFMSVWFFEEQKHSLVLMEYLRRFKPEFVPTEEELHNVRFEFDPAPALETLMM 120 Query: 121 HFCGEIRLNHWYRCAADWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALNEVGDKARAA 180 HFCGEIRLNHWYRCA++WHTEPVIKQIYKIISQDEARHGGAYLRYMKKAL EVGD ARAA Sbjct: 121 HFCGEIRLNHWYRCASEWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALIEVGDSARAA 180 Query: 181 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLERWLDNQIKFDGEWE 240 FAKIGVLMASARRTEKPLHPTNLHVNQ+LFPNDTVQSRLPDPEWLERWLD QIKFDGEWE Sbjct: 181 FAKIGVLMASARRTEKPLHPTNLHVNQSLFPNDTVQSRLPDPEWLERWLDGQIKFDGEWE 240 Query: 241 KKVVDRILHNMSLLFERTFSNVQELNRYRKEIVTRMA 277 KKVVDRILHNMSLLFERTF +VQELNRYRKEIVTR+A Sbjct: 241 KKVVDRILHNMSLLFERTFGSVQELNRYRKEIVTRLA 277 >ref|ZP_08273185.1| LSU ribosomal protein L17p [Oxalobacteraceae bacterium IMCC9480] gb|EGF33329.1| LSU ribosomal protein L17p [Oxalobacteraceae bacterium IMCC9480] Length = 283 Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 253/280 (90%), Positives = 264/280 (94%) Query: 1 MLYPELFKSLEQVRWNMDKDIPWDKFDASLLTDEQAQTIRMNAITEWSALPATEMFLRDN 60 MLYPELFKSLEQVRWNMD D+PWDKFDAS LTDEQAQTIRMNAITEWSALPATEMFLRDN Sbjct: 1 MLYPELFKSLEQVRWNMDTDVPWDKFDASKLTDEQAQTIRMNAITEWSALPATEMFLRDN 60 Query: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPDLCPTEEELHNVRFEFDPAPPLETLML 120 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRP+ PTE EL NVRFEFDPAP LETLM+ Sbjct: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPEFVPTEAELDNVRFEFDPAPALETLMM 120 Query: 121 HFCGEIRLNHWYRCAADWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALNEVGDKARAA 180 HFCGEIRLNHWYRCA+DWHTEPVIKQIYK+ISQDEARHGGAYLRYMKKAL GD ARAA Sbjct: 121 HFCGEIRLNHWYRCASDWHTEPVIKQIYKMISQDEARHGGAYLRYMKKALGVSGDSARAA 180 Query: 181 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLERWLDNQIKFDGEWE 240 FAKIGVLMASARRTEKPLHPTNLHVNQ+LFPNDTVQSRLPDP+WLE WLD QIKFDGEWE Sbjct: 181 FAKIGVLMASARRTEKPLHPTNLHVNQSLFPNDTVQSRLPDPDWLEHWLDGQIKFDGEWE 240 Query: 241 KKVVDRILHNMSLLFERTFSNVQELNRYRKEIVTRMAPPV 280 KKVV+RILHNMSLLFER+F+ VQELNRYRKE+V RMA PV Sbjct: 241 KKVVERILHNMSLLFERSFTTVQELNRYRKEVVNRMALPV 280 >ref|YP_004754656.1| 50S ribosomal protein L17p [Collimonas fungivorans Ter331] gb|AAT42409.1| unknown [Collimonas fungivorans Ter331] gb|AEK63833.1| LSU ribosomal protein L17p [Collimonas fungivorans Ter331] Length = 290 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 256/285 (89%), Positives = 267/285 (93%), Gaps = 1/285 (0%) Query: 1 MLYPELFKSLEQVRWNMDKDIPWDKFDASLLTDEQAQTIRMNAITEWSALPATEMFLRDN 60 MLYPELFKSLEQVRWNM+ DIPWDKFDA+ L+DEQAQTIRMNAITEWSALPATEMFLRDN Sbjct: 6 MLYPELFKSLEQVRWNMETDIPWDKFDATQLSDEQAQTIRMNAITEWSALPATEMFLRDN 65 Query: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPDLCPTEEELHNVRFEFDPAPPLETLML 120 GDSDF AFMSVWFFEEQKHSLVLMEYLRRFRP+L PTE EL VRFEFDPAPPLETLM+ Sbjct: 66 HGDSDFCAFMSVWFFEEQKHSLVLMEYLRRFRPELVPTEAELDKVRFEFDPAPPLETLMM 125 Query: 121 HFCGEIRLNHWYRCAADWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALNEVGDKARAA 180 HFCGEIRLNHWYRCA+DWHTEPVIKQIYKIISQDEARHGGAYLRYMKKAL+EVGD A AA Sbjct: 126 HFCGEIRLNHWYRCASDWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALSEVGDSASAA 185 Query: 181 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLERWLDNQIKFDGEWE 240 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLERWLD+QIKFDG WE Sbjct: 186 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLERWLDDQIKFDGVWE 245 Query: 241 KKVVDRILHNMSLLFERTFSNVQELNRYRKEIVTRMAPPVRPAAA 285 KKVVDRILHNMSLLFERTF VQELNRYRKE+V R+A + PA A Sbjct: 246 KKVVDRILHNMSLLFERTFDTVQELNRYRKEVVARLA-TLTPAPA 289