BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5298.p (360 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777541.1| SAM-dependent methyltransferase [Herbaspiril... 577 e-162 gb|AAT42381.1| SAM-dependent methyltransferase [Collimonas fungi... 403 e-110 ref|YP_004754651.1| biotin synthesis protein bioC [Collimonas fu... 402 e-110 ref|YP_001354844.1| biotin synthesis protein bioC [Janthinobacte... 390 e-106 ref|YP_001101154.1| methyltransferase [Herminiimonas arsenicoxyd... 382 e-104 >ref|YP_003777541.1| SAM-dependent methyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ65633.1| SAM-dependent methyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 329 Score = 577 bits (1486), Expect = e-162, Method: Composition-based stats. Identities = 296/315 (93%), Positives = 305/315 (96%) Query: 46 PMSLPPPSASAKLSAPIDLPLVRRRFGQPQRVAESDFLRREVSARMQERLALVKIAPREV 105 PMSLPPPSASAKLSAPIDLPLVRRRF PQRVAESDFLRREVSARMQERLALVKI PREV Sbjct: 15 PMSLPPPSASAKLSAPIDLPLVRRRFAHPQRVAESDFLRREVSARMQERLALVKIHPREV 74 Query: 106 LDAGCGEGADLPVLQKRYPEAQVIGLDGAYSMLAKAADHQRGAQTAMNRLFGSINKWLGS 165 LDAGCGEGADLPVLQKRYPEAQV+GLDGAY MLA AA+HQRGAQ+AMNRLFGSINKWLGS Sbjct: 75 LDAGCGEGADLPVLQKRYPEAQVVGLDGAYGMLAVAAEHQRGAQSAMNRLFGSINKWLGS 134 Query: 166 GPNAGGPELACADFASLPLAANALDLVWSNLALHWHPQPDRVFAEWRRVLRVEGLLMFSC 225 GP GPELACADFA LPLAANALDLVWSNLALHWHPQPDRVFAEWRRVLRVEGLLMFSC Sbjct: 135 GPALSGPELACADFARLPLAANALDLVWSNLALHWHPQPDRVFAEWRRVLRVEGLLMFSC 194 Query: 226 FGPDTLREVRSAFEQIDLAPHTLPFVDMHDFGDMLVNAGFSTPVMDMETITVTYETPQRL 285 FGPDTLREVRSAFE+IDLAPHTLPFVDMHDFGDMLVNAGFSTPVMDMETITVTY+TPQRL Sbjct: 195 FGPDTLREVRSAFERIDLAPHTLPFVDMHDFGDMLVNAGFSTPVMDMETITVTYDTPQRL 254 Query: 286 LEDVRAWGGNPLESRRRSMMSRSQYQRLLAAFEAMRKPDGKIPLTFEVVYGHAFRPVPKT 345 LEDVRAWGGNPLE+RRRSMMSR QYQRLLAAFEAMRKPDGKIPLTFE++YGHAFRPVPKT Sbjct: 255 LEDVRAWGGNPLETRRRSMMSRDQYQRLLAAFEAMRKPDGKIPLTFEIIYGHAFRPVPKT 314 Query: 346 TAAGESIIRFERPPR 360 TAAGESIIRF+RPPR Sbjct: 315 TAAGESIIRFDRPPR 329 >gb|AAT42381.1| SAM-dependent methyltransferase [Collimonas fungivorans Ter331] Length = 327 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 201/323 (62%), Positives = 245/323 (75%), Gaps = 11/323 (3%) Query: 38 AVHLPVPLPMSLPPPSASAKLSAPIDLPLVRRRFGQPQRVAESDFLRREVSARMQERLAL 97 A HL +PMS P SAPIDL VR+ F QP V ES+F+RRE+S+RM ERLAL Sbjct: 5 AFHLTCRIPMSTSLPPFETSQSAPIDLRRVRQLFAQPALVRESEFMRREISSRMHERLAL 64 Query: 98 VKIAPREVLDAGCGEGADLPVLQKRYPEAQVIGLDGAYSMLAKAADHQRGAQTAMNRLFG 157 VK+ P+ VLDAGCG G D+ LQ+R+ EA +IGLD + +ML+ A + ++ AQ ++NRL Sbjct: 65 VKLTPQRVLDAGCGAGPDIYTLQQRFSEAAIIGLDASAAMLSMAKEQRQTAQLSVNRL-- 122 Query: 158 SINKWLGSGPNAG-----GPELACADFASLPLAANALDLVWSNLALHWHPQPDRVFAEWR 212 + KWL P G +L C DFA LPLA N +DLVWSNLALHWHPQPDRVFAEWR Sbjct: 123 -LKKWL---PFTGKSDELASDLLCGDFAQLPLAPNTVDLVWSNLALHWHPQPDRVFAEWR 178 Query: 213 RVLRVEGLLMFSCFGPDTLREVRSAFEQIDLAPHTLPFVDMHDFGDMLVNAGFSTPVMDM 272 R+LRV+GLLMFSCFGPDT +E+R+AF ID H LPFVDMHDFGDMLVNAGFSTPVMDM Sbjct: 179 RILRVDGLLMFSCFGPDTFKELRNAFAGIDDGAHVLPFVDMHDFGDMLVNAGFSTPVMDM 238 Query: 273 ETITVTYETPQRLLEDVRAWGGNPLESRRRSMMSRSQYQRLLAAFEAMRKPDGKIPLTFE 332 ETITVTY+T ++LL DVRAWGGNPL +R R ++ R+ R+ A EA R+PDGK+PLTFE Sbjct: 239 ETITVTYDTVEKLLADVRAWGGNPLATRGRGLLGRAAGARIKVALEARRRPDGKLPLTFE 298 Query: 333 VVYGHAFRPVPKTTAAGESIIRF 355 ++YGHAFRPVPKTT+ GESI+++ Sbjct: 299 IIYGHAFRPVPKTTSGGESIVQW 321 >ref|YP_004754651.1| biotin synthesis protein bioC [Collimonas fungivorans Ter331] gb|AEK63828.1| Biotin synthesis protein bioC [Collimonas fungivorans Ter331] Length = 386 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 201/323 (62%), Positives = 245/323 (75%), Gaps = 11/323 (3%) Query: 38 AVHLPVPLPMSLPPPSASAKLSAPIDLPLVRRRFGQPQRVAESDFLRREVSARMQERLAL 97 A HL +PMS P SAPIDL VR+ F QP V ES+F+RRE+S+RM ERLAL Sbjct: 64 AFHLTCRIPMSTSLPPFETSQSAPIDLRRVRQLFAQPALVRESEFMRREISSRMHERLAL 123 Query: 98 VKIAPREVLDAGCGEGADLPVLQKRYPEAQVIGLDGAYSMLAKAADHQRGAQTAMNRLFG 157 VK+ P+ VLDAGCG G D+ LQ+R+ EA +IGLD + +ML+ A + ++ AQ ++NRL Sbjct: 124 VKLTPQRVLDAGCGAGPDIYTLQQRFSEAAIIGLDASAAMLSMAKEQRQTAQLSVNRL-- 181 Query: 158 SINKWLGSGPNAG-----GPELACADFASLPLAANALDLVWSNLALHWHPQPDRVFAEWR 212 + KWL P G +L C DFA LPLA N +DLVWSNLALHWHPQPDRVFAEWR Sbjct: 182 -LKKWL---PFTGKSDELASDLLCGDFAQLPLAPNTVDLVWSNLALHWHPQPDRVFAEWR 237 Query: 213 RVLRVEGLLMFSCFGPDTLREVRSAFEQIDLAPHTLPFVDMHDFGDMLVNAGFSTPVMDM 272 R+LRV+GLLMFSCFGPDT +E+R+AF ID H LPFVDMHDFGDMLVNAGFSTPVMDM Sbjct: 238 RILRVDGLLMFSCFGPDTFKELRNAFAGIDDGAHVLPFVDMHDFGDMLVNAGFSTPVMDM 297 Query: 273 ETITVTYETPQRLLEDVRAWGGNPLESRRRSMMSRSQYQRLLAAFEAMRKPDGKIPLTFE 332 ETITVTY+T ++LL DVRAWGGNPL +R R ++ R+ R+ A EA R+PDGK+PLTFE Sbjct: 298 ETITVTYDTVEKLLADVRAWGGNPLATRGRGLLGRAAGARIKVALEARRRPDGKLPLTFE 357 Query: 333 VVYGHAFRPVPKTTAAGESIIRF 355 ++YGHAFRPVPKTT+ GESI+++ Sbjct: 358 IIYGHAFRPVPKTTSGGESIVQW 380 >ref|YP_001354844.1| biotin synthesis protein bioC [Janthinobacterium sp. Marseille] gb|ABR91240.1| biotin synthesis protein bioC [Janthinobacterium sp. Marseille] Length = 312 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 202/316 (63%), Positives = 243/316 (76%), Gaps = 7/316 (2%) Query: 47 MSLPPPSASAKLSAPIDLPLVRRRFGQPQRVAESDFLRREVSARMQERLALVKIAPREVL 106 MS PP + +KLSAPIDL VR F P R ES FLRREV+ RM ERLALVKIAP VL Sbjct: 1 MSSLPPQSDSKLSAPIDLNRVRDLFSDPVRTLESGFLRREVATRMHERLALVKIAPTHVL 60 Query: 107 DAGCGEGADLPVLQKRYPEAQVIGLDGAYSMLAKAADHQRGAQTAMNRLFGSINKWLGS- 165 DAGCGEGADL LQKR+P+A ++GLD + +MLA A + Q ++MNRL + +WL + Sbjct: 61 DAGCGEGADLTTLQKRFPQAAMLGLDASSAMLAAAQESQVAGLSSMNRL---LQQWLPAV 117 Query: 166 -GPNAGGPELACADFASLPLAANALDLVWSNLALHWHPQPDRVFAEWRRVLRVEGLLMFS 224 G ++G L C +FA LPL NA+DLVWSNLALHWHPQPD+VF EWRRVLR +GLLMFS Sbjct: 118 MGRDSGA-SLICGNFAQLPLGINAVDLVWSNLALHWHPQPDQVFVEWRRVLRQDGLLMFS 176 Query: 225 CFGPDTLREVRSAFEQIDLAPHTLPFVDMHDFGDMLVNAGFSTPVMDMETITVTYETPQR 284 CFGPDT +E+R+AF D PH LPFVDMHDFGDMLVNAGFSTPVMDMET+TVTY + ++ Sbjct: 177 CFGPDTFKELRAAFAAADAEPHVLPFVDMHDFGDMLVNAGFSTPVMDMETLTVTYGSVEK 236 Query: 285 LLEDVRAWGGNPLESRRRSMMSRSQYQRLLAAFEAMRKPDGKIPLTFEVVYGHAFRPVPK 344 L+ DVRA GGNPL++RRR ++ + +QR + E R+ DGKIPLTFEV+YGHAFRP P+ Sbjct: 237 LMADVRAMGGNPLDTRRRGLLGKQAWQRAMDVLEQSRRADGKIPLTFEVIYGHAFRPAPR 296 Query: 345 TTAAGESIIRFERPPR 360 TA+GESIIRF+ PPR Sbjct: 297 ATASGESIIRFD-PPR 311 >ref|YP_001101154.1| methyltransferase [Herminiimonas arsenicoxydans] emb|CAL63033.1| Putative S-adenosyl-L-methionine-dependent methyltransferase [Herminiimonas arsenicoxydans] Length = 319 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 208/322 (64%), Positives = 251/322 (77%), Gaps = 11/322 (3%) Query: 47 MSLPP--PSAS---AKLSAPIDLPLVRRRFGQPQRVAESDFLRREVSARMQERLALVKIA 101 MSL P P +S +KLSAPIDL VR F P R+ ES+FLRREV+ARM ERLALV+IA Sbjct: 1 MSLNPYAPVSSLPDSKLSAPIDLNRVRSLFANPARIVESNFLRREVAARMHERLALVRIA 60 Query: 102 PREVLDAGCGEGADLPVLQKRYPEAQVIGLDGAYSMLAKAADHQRGAQTAMNRLFGSINK 161 P+ VLDAGCGEGADL LQK +PEA ++GLD A +MLA A Q A++ MNRL + + Sbjct: 61 PQYVLDAGCGEGADLATLQKHFPEAAMLGLDAAPAMLAAAMQAQMAARSTMNRL---LQQ 117 Query: 162 WLGSGPNAG---GPELACADFASLPLAANALDLVWSNLALHWHPQPDRVFAEWRRVLRVE 218 WL +G G + C DFA LPL +A+DLVWSNLALHWHPQPDRVFAEWRRVLR + Sbjct: 118 WLPAGIGKGKNPAASVLCGDFAQLPLRMDAVDLVWSNLALHWHPQPDRVFAEWRRVLRQD 177 Query: 219 GLLMFSCFGPDTLREVRSAFEQIDLAPHTLPFVDMHDFGDMLVNAGFSTPVMDMETITVT 278 GLLMFSCFGPDT +E+R+AF+ D APH LPFVDMHDFGDMLVNAGFSTPVMDMET+TVT Sbjct: 178 GLLMFSCFGPDTFKELRAAFDVADGAPHALPFVDMHDFGDMLVNAGFSTPVMDMETLTVT 237 Query: 279 YETPQRLLEDVRAWGGNPLESRRRSMMSRSQYQRLLAAFEAMRKPDGKIPLTFEVVYGHA 338 Y + ++L++DVRAWGGNPL++RRR ++ R +QR++ E R+ DGKIPLTFEV+YGHA Sbjct: 238 YGSVEKLMDDVRAWGGNPLDTRRRGLLGRRAWQRVVQVLEQSRQADGKIPLTFEVIYGHA 297 Query: 339 FRPVPKTTAAGESIIRFERPPR 360 FRP PKT A+GESI+RF+ P + Sbjct: 298 FRPAPKTRASGESIVRFDWPKK 319