BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5285.p (192 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777529.1| lipoprotein [Herbaspirillum seropedicae SmR1... 317 8e-85 ref|YP_004751224.1| cytochrome oxidase biogenesis protein Sco1/S... 286 1e-75 ref|YP_001101143.1| SCO1/Sen family protein [Herminiimonas arsen... 284 4e-75 ref|YP_001354833.1| SenC family protein [Janthinobacterium sp. M... 280 7e-74 ref|ZP_00943895.1| Hypothetical Protein RRSL_03288 [Ralstonia so... 244 5e-63 >ref|YP_003777529.1| lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ65621.1| lipoprotein [Herbaspirillum seropedicae SmR1] Length = 196 Score = 317 bits (811), Expect = 8e-85, Method: Composition-based stats. Identities = 165/187 (88%), Positives = 168/187 (89%), Gaps = 4/187 (2%) Query: 1 MKRLLSFLPAALLALGMLSLAGCQQSAAE-KFVNTDVTGLEYAKDFALTDHTGKPRTLAD 59 MKR FL A LLA LA C S E KF NTDVTGL+YAKDFALTDHTGKPRTLAD Sbjct: 1 MKR---FLSALLLAGCATLLAACGPSKPELKFNNTDVTGLDYAKDFALTDHTGKPRTLAD 57 Query: 60 FKGKVVVMFFGYTQCPDVCPTTMVEMSNVMKELGPDADRVQVLFVTVDPERDTQEVLAQY 119 FKGKVVVMFFGYTQCPDVCPTTMVEMSNVMKELGPDAD+VQVLFVTVDPERDTQEVL+QY Sbjct: 58 FKGKVVVMFFGYTQCPDVCPTTMVEMSNVMKELGPDADKVQVLFVTVDPERDTQEVLSQY 117 Query: 120 VPAFDKRFLGLRGDLQQTEKVAKEFKVFYQKVPGKQPGSYTMDHTAGSYVFDPQGHIRLF 179 VPAFDKRFLGLRGD QQTEKVAKEFKVFYQKVPGKQPGSYTMDHTAGSYVFDPQG IRLF Sbjct: 118 VPAFDKRFLGLRGDQQQTEKVAKEFKVFYQKVPGKQPGSYTMDHTAGSYVFDPQGRIRLF 177 Query: 180 VKHGQGP 186 VKHGQGP Sbjct: 178 VKHGQGP 184 >ref|YP_004751224.1| cytochrome oxidase biogenesis protein Sco1/SenC/PrrC copper metallochaperone [Collimonas fungivorans Ter331] gb|AEK60401.1| Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone [Collimonas fungivorans Ter331] Length = 208 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 144/200 (72%), Positives = 161/200 (80%), Gaps = 14/200 (7%) Query: 1 MKRLLSFLPAALLALGMLSLAGCQQSAA------------EKFVNTDVTGLEYAKDFALT 48 MKR++ + A LLA LSL C A F+NTDVTGL YA+DFALT Sbjct: 1 MKRVIPVVVAGLLA--ALSLIACGDKPAGGGQEMTLSPANSAFINTDVTGLGYARDFALT 58 Query: 49 DHTGKPRTLADFKGKVVVMFFGYTQCPDVCPTTMVEMSNVMKELGPDADRVQVLFVTVDP 108 DHTGKPRTLAD+KGK VV+FFGYTQCPDVCPTTMVEM+NVMKELGP A +VQVLFVTVDP Sbjct: 59 DHTGKPRTLADYKGKAVVVFFGYTQCPDVCPTTMVEMANVMKELGPQASKVQVLFVTVDP 118 Query: 109 ERDTQEVLAQYVPAFDKRFLGLRGDLQQTEKVAKEFKVFYQKVPGKQPGSYTMDHTAGSY 168 ERDTQE+L++YVPAFD F+GL GD T+KVAKEF+VFYQKVPGK PGSYTMDHTAGSY Sbjct: 119 ERDTQELLSKYVPAFDPSFVGLYGDQAATDKVAKEFRVFYQKVPGKTPGSYTMDHTAGSY 178 Query: 169 VFDPQGHIRLFVKHGQGPSP 188 VFDP+GHIRLFV+HGQGP P Sbjct: 179 VFDPEGHIRLFVRHGQGPDP 198 >ref|YP_001101143.1| SCO1/Sen family protein [Herminiimonas arsenicoxydans] emb|CAL63022.1| putative electron transport protein SCO1/SenC [Herminiimonas arsenicoxydans] Length = 187 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 135/172 (78%), Positives = 148/172 (86%) Query: 17 MLSLAGCQQSAAEKFVNTDVTGLEYAKDFALTDHTGKPRTLADFKGKVVVMFFGYTQCPD 76 +L L+ C A F NTDVTGL Y KDF+LTDH GKPRTLADFKGK VV+FFG+TQCPD Sbjct: 5 VLGLSACSGKAPPAFTNTDVTGLAYGKDFSLTDHNGKPRTLADFKGKAVVVFFGFTQCPD 64 Query: 77 VCPTTMVEMSNVMKELGPDADRVQVLFVTVDPERDTQEVLAQYVPAFDKRFLGLRGDLQQ 136 VCPTTM+EM+NVMK LGPDAD+VQVLFVTVDPERDT E+L QYVPAFD RFLGLRGDL + Sbjct: 65 VCPTTMLEMANVMKALGPDADKVQVLFVTVDPERDTAELLKQYVPAFDPRFLGLRGDLAE 124 Query: 137 TEKVAKEFKVFYQKVPGKQPGSYTMDHTAGSYVFDPQGHIRLFVKHGQGPSP 188 TEK AKEFKVFYQKVPGK PGSYT+DHTAGSYVFD QG IRLF++HGQG P Sbjct: 125 TEKTAKEFKVFYQKVPGKTPGSYTIDHTAGSYVFDTQGRIRLFIRHGQGTEP 176 >ref|YP_001354833.1| SenC family protein [Janthinobacterium sp. Marseille] gb|ABR89946.1| SenC family protein [Janthinobacterium sp. Marseille] Length = 198 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 136/185 (73%), Positives = 153/185 (82%), Gaps = 1/185 (0%) Query: 5 LSFLPAALLALGMLSLAGCQQSAAE-KFVNTDVTGLEYAKDFALTDHTGKPRTLADFKGK 63 + F ++ + +L C A + F NTD+TGL YAK+F+L DH GK RTLADFKGK Sbjct: 1 MRFRSLLVICAALFALTACSDKAKQVAFNNTDLTGLGYAKEFSLHDHNGKLRTLADFKGK 60 Query: 64 VVVMFFGYTQCPDVCPTTMVEMSNVMKELGPDADRVQVLFVTVDPERDTQEVLAQYVPAF 123 VV+FFG+TQCPDVCPTTM+EMSNVMK LGPDADRVQVLFVTVDPERDT +LAQYVPAF Sbjct: 61 AVVVFFGFTQCPDVCPTTMMEMSNVMKALGPDADRVQVLFVTVDPERDTAALLAQYVPAF 120 Query: 124 DKRFLGLRGDLQQTEKVAKEFKVFYQKVPGKQPGSYTMDHTAGSYVFDPQGHIRLFVKHG 183 D RFLGLRGDL +TEKVAKEFKVFYQKVPGK PGSYT+DHTAGSYVFDPQG IRLF++HG Sbjct: 121 DPRFLGLRGDLAETEKVAKEFKVFYQKVPGKTPGSYTVDHTAGSYVFDPQGRIRLFIRHG 180 Query: 184 QGPSP 188 QG P Sbjct: 181 QGIDP 185 >ref|ZP_00943895.1| Hypothetical Protein RRSL_03288 [Ralstonia solanacearum UW551] gb|EAP73564.1| Hypothetical Protein RRSL_03288 [Ralstonia solanacearum UW551] Length = 235 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 115/160 (71%), Positives = 138/160 (86%), Gaps = 2/160 (1%) Query: 31 FVNTDVTGLE-YAKDFALTDHTGKPRTLADFKGKVVVMFFGYTQCPDVCPTTMVEMSNVM 89 F N D+TG + + DF+LTDHTGK RTLADF+GKVVVMFFGYT CPDVCPTT+ E+ VM Sbjct: 66 FQNLDITGAKSFGADFSLTDHTGKRRTLADFRGKVVVMFFGYTHCPDVCPTTLAELRGVM 125 Query: 90 KELGPDADRVQVLFVTVDPERDTQEVLAQYVPAFDKRFLGLR-GDLQQTEKVAKEFKVFY 148 + LG DADRVQVLFVTVDP+RDTQ++LA+YVPAFD RF+GLR + Q+ +KVAK+FKVFY Sbjct: 126 EGLGKDADRVQVLFVTVDPQRDTQDLLAKYVPAFDPRFIGLRPANDQELQKVAKDFKVFY 185 Query: 149 QKVPGKQPGSYTMDHTAGSYVFDPQGHIRLFVKHGQGPSP 188 KVPG P +YTMDHTAGSY+FDPQG++RLF+KHGQGP+P Sbjct: 186 SKVPGSSPDNYTMDHTAGSYMFDPQGNLRLFIKHGQGPAP 225