BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5280.p (391 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777524.1| signal recognition particle GTPase involved ... 533 e-149 ref|YP_001101139.1| signal recognition particle receptor [Hermin... 475 e-132 ref|YP_001354829.1| signal recognition particle receptor [Janthi... 471 e-130 ref|YP_004751241.1| signal recognition particle receptor protein... 463 e-128 emb|CAQ56680.1| cell division protein [Ralstonia solanacearum Mo... 427 e-117 >ref|YP_003777524.1| signal recognition particle GTPase involved in cell division protein [Herbaspirillum seropedicae SmR1] gb|ADJ65616.1| signal recognition particle GTPase involved in cell division protein [Herbaspirillum seropedicae SmR1] Length = 321 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 301/314 (95%), Positives = 304/314 (96%) Query: 78 AEEVEIVAAPELAPEVKRSWLSRLKAGLSKTSSNLTTLFVGARIDEDLYEELESALLVSD 137 AEE EIV AP APE KRSWLSRLKAGLSKTSSNLTTLFVGARIDEDLYEELESALLVSD Sbjct: 8 AEEAEIVPAPAPAPEAKRSWLSRLKAGLSKTSSNLTTLFVGARIDEDLYEELESALLVSD 67 Query: 138 AGVEATQWLLAELKKKVKNERLTEAAQVRTALRALLIDLLQPLQRPLVLGRDKPLVMMIA 197 AGVEATQWLL ELKKKVK ERLTEAAQVRTALR LLI+LLQPLQRPLVLGRDKPLVMMIA Sbjct: 68 AGVEATQWLLDELKKKVKAERLTEAAQVRTALRTLLIELLQPLQRPLVLGRDKPLVMMIA 127 Query: 198 GVNGAGKTTTIGKLALHLQAHGQSVLLAAGDTFRAAAREQLAVWGERNNVQVIAQESGDP 257 GVNGAGKTTTIGKLALHLQAHGQSVLLAAGDTFRAAAREQLAVWGERNNVQVIAQESGDP Sbjct: 128 GVNGAGKTTTIGKLALHLQAHGQSVLLAAGDTFRAAAREQLAVWGERNNVQVIAQESGDP 187 Query: 258 AAVAYDSVHSAQARGTHVVMVDTAGRLPTQLHLMDELKKIKRVIAKAMNSAPHEVLLVID 317 AAVAYDSVHSAQARGTHVVMVDTAGRLPTQLHLMDELKKIKRVI KAM+SAPHEVLLVID Sbjct: 188 AAVAYDSVHSAQARGTHVVMVDTAGRLPTQLHLMDELKKIKRVIGKAMHSAPHEVLLVID 247 Query: 318 GNTGQNALAQVKAFDDALGLTGLVVTKLDGTAKGGILAAIAKTRPVPLYFIGVGEKIEDL 377 GNTGQNALAQVKAFDDALGLTGLVVTKLDGTAKGGILAAIAKTRPVPLYFIGVGE+IEDL Sbjct: 248 GNTGQNALAQVKAFDDALGLTGLVVTKLDGTAKGGILAAIAKTRPVPLYFIGVGEQIEDL 307 Query: 378 QPFNATEFVDALLS 391 Q FNATEFVDALLS Sbjct: 308 QAFNATEFVDALLS 321 >ref|YP_001101139.1| signal recognition particle receptor [Herminiimonas arsenicoxydans] emb|CAL63018.1| Cell division protein FtsY homolog [Herminiimonas arsenicoxydans] Length = 408 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 272/341 (79%), Positives = 305/341 (89%), Gaps = 2/341 (0%) Query: 50 PVEPVAPAPAPQPVPAPEPEPIATEAPAAEEVEIVAAPELAPEVKRSWLSRLKAGLSKTS 109 P EP A +P PAP PE AP + EIVAA A E K+SW++RLK GLSKTS Sbjct: 69 PQEPAPLATSPA-TPAPAPEMPVVPAPPETQTEIVAAVTPA-EQKQSWMARLKVGLSKTS 126 Query: 110 SNLTTLFVGARIDEDLYEELESALLVSDAGVEATQWLLAELKKKVKNERLTEAAQVRTAL 169 SNLTTLFVGA+IDEDLYEELESALL+SDAGV+ATQ+LL ELK+KV+NE+LTEAAQV+TAL Sbjct: 127 SNLTTLFVGAKIDEDLYEELESALLMSDAGVDATQFLLTELKRKVRNEKLTEAAQVKTAL 186 Query: 170 RALLIDLLQPLQRPLVLGRDKPLVMMIAGVNGAGKTTTIGKLALHLQAHGQSVLLAAGDT 229 R+LL+++L PLQ+PLVLG+ +PLVMMI GVNGAGKTTTIGKLA HLQAH QSVLLAAGDT Sbjct: 187 RSLLLEMLTPLQKPLVLGQHQPLVMMITGVNGAGKTTTIGKLAKHLQAHHQSVLLAAGDT 246 Query: 230 FRAAAREQLAVWGERNNVQVIAQESGDPAAVAYDSVHSAQARGTHVVMVDTAGRLPTQLH 289 FRAAAREQL VWGERNNV VIAQESGDPAAVA+D+VHSAQARGT+VVMVDTAGRLPTQLH Sbjct: 247 FRAAAREQLTVWGERNNVTVIAQESGDPAAVAFDAVHSAQARGTNVVMVDTAGRLPTQLH 306 Query: 290 LMDELKKIKRVIAKAMNSAPHEVLLVIDGNTGQNALAQVKAFDDALGLTGLVVTKLDGTA 349 LM+ELKKIKRVIAK M+SAPHE+LL+IDGNTGQNAL QVKAFDDALGLTGLVVTKLDGTA Sbjct: 307 LMEELKKIKRVIAKGMSSAPHEILLIIDGNTGQNALTQVKAFDDALGLTGLVVTKLDGTA 366 Query: 350 KGGILAAIAKTRPVPLYFIGVGEKIEDLQPFNATEFVDALL 390 KGG+LAAIA+ RP+P+YFIGVGE+IEDLQPFNA EFV+ALL Sbjct: 367 KGGVLAAIARARPIPVYFIGVGEQIEDLQPFNAQEFVEALL 407 >ref|YP_001354829.1| signal recognition particle receptor [Janthinobacterium sp. Marseille] gb|ABR88909.1| signal recognition particle receptor [Janthinobacterium sp. Marseille] Length = 419 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 271/390 (69%), Positives = 312/390 (80%), Gaps = 37/390 (9%) Query: 1 MFSFFKRKPKPEAQPALPPQAEPAPQPAPAPSVAPAAVEPPVSAPAPLAPVEPVAPAPAP 60 MFSFFK+KP+ +PAPAP + V ++A P E A Sbjct: 66 MFSFFKKKPQ---------------EPAPAPQTSTVPVSEELTATIPAPSPEAAAAEVQA 110 Query: 61 QPVPAPEPEPIATEAPAAEEVEIVAAPELAPEVKRSWLSRLKAGLSKTSSNLTTLFVGAR 120 + VPA P E K+SW++RLK GLSKTS+NLTTLFVGA+ Sbjct: 111 EIVPAVTP----------------------AEQKQSWMARLKVGLSKTSTNLTTLFVGAK 148 Query: 121 IDEDLYEELESALLVSDAGVEATQWLLAELKKKVKNERLTEAAQVRTALRALLIDLLQPL 180 ID+DLYEELESALL+SDAGV+ATQ+LL LK+KVKNE+LTEAAQV+TALR+LL+++L PL Sbjct: 149 IDDDLYEELESALLMSDAGVDATQFLLDALKRKVKNEKLTEAAQVKTALRSLLLEMLTPL 208 Query: 181 QRPLVLGRDKPLVMMIAGVNGAGKTTTIGKLALHLQAHGQSVLLAAGDTFRAAAREQLAV 240 Q+PLVLG+ +PLVMMI GVNGAGKTTTIGKLA HLQAH QSVLLAAGDTFRAAAREQL V Sbjct: 209 QKPLVLGQHQPLVMMITGVNGAGKTTTIGKLAKHLQAHNQSVLLAAGDTFRAAAREQLTV 268 Query: 241 WGERNNVQVIAQESGDPAAVAYDSVHSAQARGTHVVMVDTAGRLPTQLHLMDELKKIKRV 300 WG+RNNV VIAQESGDPAAVA+D+VHSAQARGT+VVMVDTAGRLPTQLHLM+ELKK+KRV Sbjct: 269 WGQRNNVTVIAQESGDPAAVAFDAVHSAQARGTNVVMVDTAGRLPTQLHLMEELKKVKRV 328 Query: 301 IAKAMNSAPHEVLLVIDGNTGQNALAQVKAFDDALGLTGLVVTKLDGTAKGGILAAIAKT 360 +AK M SAPHE+LL+IDGNTGQNAL QVKAFDDALGLTGLVVTKLDGTAKGG+LAAIA+ Sbjct: 329 MAKGMASAPHEILLIIDGNTGQNALTQVKAFDDALGLTGLVVTKLDGTAKGGVLAAIARA 388 Query: 361 RPVPLYFIGVGEKIEDLQPFNATEFVDALL 390 RP+P+YFIGVGE+IEDLQPFNA EFV+ALL Sbjct: 389 RPIPVYFIGVGEQIEDLQPFNAQEFVEALL 418 >ref|YP_004751241.1| signal recognition particle receptor protein FtsY (alpha subunit) [Collimonas fungivorans Ter331] gb|AEK60418.1| Signal recognition particle receptor protein FtsY (alpha subunit) [Collimonas fungivorans Ter331] Length = 374 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 287/392 (73%), Positives = 320/392 (81%), Gaps = 19/392 (4%) Query: 1 MFSFFKRKPKPEAQPALPPQAEPAPQPAPAPSVAPAAVEPPVSAPAPLAPVEPVAPAP-A 59 MFSFFK+KPKPE PQP P+ A +E + P A A Sbjct: 1 MFSFFKKKPKPEV----------IPQPKPSAPAELAQIEAVEAIPVVAPSAPAPAEAGVT 50 Query: 60 PQPVPAPEPEPIATEAPAAEEVEIVAAPELAPEVKRSWLSRLKAGLSKTSSNLTTLFVGA 119 PV APE EP A E EIVAAP +A E KRSWLSRLK GLSKTSSNL+ LFVGA Sbjct: 51 SDPVVAPEVEP-------AAETEIVAAP-VAAEQKRSWLSRLKTGLSKTSSNLSILFVGA 102 Query: 120 RIDEDLYEELESALLVSDAGVEATQWLLAELKKKVKNERLTEAAQVRTALRALLIDLLQP 179 +ID+DLYEELESALLVSDAGV+AT +LL LKKKVK+++LTEA QV+ ALR+LLIDLL P Sbjct: 103 KIDDDLYEELESALLVSDAGVDATHFLLNALKKKVKDDKLTEAVQVKAALRSLLIDLLTP 162 Query: 180 LQRPLVLGRDKPLVMMIAGVNGAGKTTTIGKLALHLQAHGQSVLLAAGDTFRAAAREQLA 239 LQ+PLVL + +PLV+MIAGVNGAGKTTTIGKLA HLQAH QSVLLAAGDTFRAAAREQL Sbjct: 163 LQKPLVLDQHQPLVIMIAGVNGAGKTTTIGKLAKHLQAHKQSVLLAAGDTFRAAAREQLT 222 Query: 240 VWGERNNVQVIAQESGDPAAVAYDSVHSAQARGTHVVMVDTAGRLPTQLHLMDELKKIKR 299 +WGERNNV VI+QESGDPAAVA+D+VHSAQARGT+VVMVDTAGRLPTQLHLMDELKKIKR Sbjct: 223 IWGERNNVTVISQESGDPAAVAFDAVHSAQARGTNVVMVDTAGRLPTQLHLMDELKKIKR 282 Query: 300 VIAKAMNSAPHEVLLVIDGNTGQNALAQVKAFDDALGLTGLVVTKLDGTAKGGILAAIAK 359 VI K M +APHE+LLVIDGNTGQNALAQVKAFDDALGLTGLV+TKLDGTAKGG+LAAIA Sbjct: 283 VIGKGMATAPHEILLVIDGNTGQNALAQVKAFDDALGLTGLVITKLDGTAKGGVLAAIAT 342 Query: 360 TRPVPLYFIGVGEKIEDLQPFNATEFVDALLS 391 TR +P+YFIGVGE+IEDLQPF+A EFVDALL+ Sbjct: 343 TRAIPVYFIGVGEQIEDLQPFDAAEFVDALLN 374 >emb|CAQ56680.1| cell division protein [Ralstonia solanacearum MolK2] Length = 381 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 229/348 (65%), Positives = 286/348 (82%), Gaps = 2/348 (0%) Query: 45 PAPLAPVEPVAPAPAPQPVPAPEPEPIATEA--PAAEEVEIVAAPELAPEVKRSWLSRLK 102 PAP+A P A P A A A+++E V P + + ++ W+SRL+ Sbjct: 33 PAPVASPTPAPTPAPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVMEQARKGWMSRLR 92 Query: 103 AGLSKTSSNLTTLFVGARIDEDLYEELESALLVSDAGVEATQWLLAELKKKVKNERLTEA 162 +GLSKTS +LTTLFVG ++DE L+EELE+ALL++DAGV+AT++LL EL+++VK +R+ A Sbjct: 93 SGLSKTSKSLTTLFVGVKVDETLFEELETALLMADAGVDATEYLLDELRRRVKTQRIETA 152 Query: 163 AQVRTALRALLIDLLQPLQRPLVLGRDKPLVMMIAGVNGAGKTTTIGKLALHLQAHGQSV 222 V+TALR LL++LL PL++ +VLGRD+P+V+MIAGVNGAGKTT+IGKL H Q +GQSV Sbjct: 153 ESVKTALRDLLVELLHPLEKTMVLGRDQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSV 212 Query: 223 LLAAGDTFRAAAREQLAVWGERNNVQVIAQESGDPAAVAYDSVHSAQARGTHVVMVDTAG 282 LLAAGDTFRAAAREQL +WG+RNNV V+AQESGDPAAV +D+V++A+ARG +VM DTAG Sbjct: 213 LLAAGDTFRAAAREQLVIWGQRNNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAG 272 Query: 283 RLPTQLHLMDELKKIKRVIAKAMNSAPHEVLLVIDGNTGQNALAQVKAFDDALGLTGLVV 342 RLPTQ+HLM+ELKK++RVI KAM +APHE LLVID NTGQNALAQVKAFDDALGLTGL+V Sbjct: 273 RLPTQMHLMEELKKVRRVIGKAMVTAPHETLLVIDANTGQNALAQVKAFDDALGLTGLIV 332 Query: 343 TKLDGTAKGGILAAIAKTRPVPLYFIGVGEKIEDLQPFNATEFVDALL 390 TKLDGTAKGGILAAIA+ RPVP+YFIGVGE++EDLQPF+A EF DALL Sbjct: 333 TKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALL 380