BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5277.p (440 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777521.1| zinc protease-like signal peptide protein [H... 682 0.0 ref|YP_001354827.1| hypothetical protein mma_3137 [Janthinobacte... 483 e-134 ref|YP_001101137.1| putative Zinc protease-like signal peptide p... 466 e-129 ref|ZP_04577913.1| conserved hypothetical protein [Oxalobacter f... 448 e-123 dbj|BAJ78283.1| M16 peptidase subunit [Sphingomonas sp. A1] 438 e-121 >ref|YP_003777521.1| zinc protease-like signal peptide protein [Herbaspirillum seropedicae SmR1] emb|CAM32675.1| Zinc protease-like signal peptide protein [Herbaspirillum seropedicae] gb|ADJ65613.1| zinc protease-like signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 438 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 375/414 (90%), Positives = 387/414 (93%), Gaps = 2/414 (0%) Query: 26 IQSWTQPDGARVLFVANHSIPMLDVSVQFDAGQRRDPAAKAGLAELTVASLTRGVEAADG 85 IQSWTQPDGARVLFV NH+IPMLDVSVQFDAGQRRDPA KAGLAELTVASLTRGV A G Sbjct: 26 IQSWTQPDGARVLFVPNHAIPMLDVSVQFDAGQRRDPAGKAGLAELTVASLTRGVTDASG 85 Query: 86 KPALNEAQILDGFADVAAQQQGGAGQDRAGVSLRSLSSPAERDAALGLLGRMLAHPAFPQ 145 L EAQILDGFADVAAQQ GAGQDRAGVSLR+LSSPAER+AAL LL RMLAHP+FPQ Sbjct: 86 --TLTEAQILDGFADVAAQQHDGAGQDRAGVSLRTLSSPAEREAALTLLARMLAHPSFPQ 143 Query: 146 AGLERDRALAIANLKEELTKPETIAEKAFMEAAYGSHPYAVDASEASLQAITREDLLAFH 205 A LERDRALAIAN+KEELTKPE IAEKAFM AAYGSHPYA+DASEAS+QAITREDL AFH Sbjct: 144 ASLERDRALAIANIKEELTKPEVIAEKAFMHAAYGSHPYAMDASEASMQAITREDLQAFH 203 Query: 206 RAHYVANRAVIALIGDITEAQARSIASALTRELPQGSALPALPQVAAPKGVERRIAHPAS 265 RAHYVANRAVIALIGDI QAR+IASALTRELPQG+ALPALP V APKG E RIAHPAS Sbjct: 204 RAHYVANRAVIALIGDINLEQARAIASALTRELPQGAALPALPPVVAPKGSEERIAHPAS 263 Query: 266 QSHILIGAPAIQRGDNDFFALTVGNYVLGGGGFVSRLTDEVREKRGLSYSVYSYFSPLAQ 325 QSHILIGAPAIQRGD DFFALTVGNYVLGGGGFVSRLTDEVREKRGLSYSVYS FSPLAQ Sbjct: 264 QSHILIGAPAIQRGDPDFFALTVGNYVLGGGGFVSRLTDEVREKRGLSYSVYSGFSPLAQ 323 Query: 326 PGPFQIGLQTKKEQTAEALRVTRATLDKFLQEGPTAAELKAAKDNLAGGFALRIDSNAKL 385 PGPFQIGLQTKKEQTAEALRVTR TLDKF+QEGPTAAELKAAKDNLAGGFALRIDSNAKL Sbjct: 324 PGPFQIGLQTKKEQTAEALRVTRVTLDKFMQEGPTAAELKAAKDNLAGGFALRIDSNAKL 383 Query: 386 LENLSVIGFYGLPLDYLDHWIERIRAVSVQDVRAAFRKHVHPEELSTVIVGEAA 439 LENLSVIGFYGLPLDYLDHWIERIRAVSVQDVRAAFRKHVHPEELST+IVGE+A Sbjct: 384 LENLSVIGFYGLPLDYLDHWIERIRAVSVQDVRAAFRKHVHPEELSTIIVGESA 437 >ref|YP_001354827.1| hypothetical protein mma_3137 [Janthinobacterium sp. Marseille] gb|ABR89692.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 449 Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 267/439 (60%), Positives = 328/439 (74%), Gaps = 6/439 (1%) Query: 4 ILPLLLLPLAFLCSA--PASAALAIQSWTQPDGARVLFVANHSIPMLDVSVQFDAGQRRD 61 +L L ++ LC A + AAL IQSWT +GARVLFV NH+IPMLDVSV FDAG RRD Sbjct: 11 VLMLKIISSVVLCVACNASYAALQIQSWTLSNGARVLFVENHTIPMLDVSVDFDAGSRRD 70 Query: 62 PAAKAGLAELTVASLTRGVEAA--DGKPALNEAQILDGFADVAAQQQGGAGQDRAGVSLR 119 PA K+G A LT A L RG+ AA + AL+EAQI D FAD AAQ+ G DRAG +LR Sbjct: 71 PAGKSGTAALTGAMLARGIHAAPTGNEGALSEAQISDAFADTAAQRGGRFDDDRAGATLR 130 Query: 120 SLSSPAERDAALGLLGRMLAHPAFPQAGLERDRALAIANLKEELTKPETIAEKAFMEAAY 179 +L + ER+ A+ LL R+LA+P+FP+ L+RD+A I+ +KE LTKPE IA KAF + Y Sbjct: 131 TLVT--ERETAVSLLARVLAYPSFPEEFLQRDKARTISAIKESLTKPEAIAGKAFSKRLY 188 Query: 180 GSHPYAVDASEASLQAITREDLLAFHRAHYVANRAVIALIGDITEAQARSIASALTRELP 239 GSHPY A AS++AI REDLLAFH +YVANRAV+ALIGD+T A+A IA LT+ LP Sbjct: 189 GSHPYGQQADVASIEAIKREDLLAFHAKYYVANRAVVALIGDVTRAEADQIAQQLTQRLP 248 Query: 240 QGSALPALPQVAAPKGVERRIAHPASQSHILIGAPAIQRGDNDFFALTVGNYVLGGGGFV 299 QG ALP LP V G E RI+H ASQ+HILIG P + R D D FALTVGNYVLGGGGFV Sbjct: 249 QGEALPPLPPVTIAPGEEERISHQASQAHILIGMPGMARHDPDHFALTVGNYVLGGGGFV 308 Query: 300 SRLTDEVREKRGLSYSVYSYFSPLAQPGPFQIGLQTKKEQTAEALRVTRATLDKFLQEGP 359 SRL +VRE+RGLSY V SYF P+AQPGPFQI LQTKKEQ +AL+V R+T+ +L++GP Sbjct: 309 SRLMQQVREQRGLSYGVSSYFIPMAQPGPFQISLQTKKEQADQALQVVRSTVADYLRDGP 368 Query: 360 TAAELKAAKDNLAGGFALRIDSNAKLLENLSVIGFYGLPLDYLDHWIERIRAVSVQDVRA 419 T AELKAAKDNL GGFALRIDSN K+LEN++ IGFY LPLDYLD W +++ V+ +V+A Sbjct: 369 TPAELKAAKDNLIGGFALRIDSNKKILENIAAIGFYDLPLDYLDTWTDKVSKVTAAEVKA 428 Query: 420 AFRKHVHPEELSTVIVGEA 438 AF++ + ++L+TV+VG A Sbjct: 429 AFQRKIQLDKLATVVVGAA 447 >ref|YP_001101137.1| putative Zinc protease-like signal peptide protein [Herminiimonas arsenicoxydans] emb|CAL63016.1| Putative peptidase M16 [Herminiimonas arsenicoxydans] Length = 436 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 267/426 (62%), Positives = 322/426 (75%), Gaps = 6/426 (1%) Query: 15 LCSA--PASAALAIQSWTQPDGARVLFVANHSIPMLDVSVQFDAGQRRDPAAKAGLAELT 72 LC+A + AAL IQSWT +GARVLFV NH+IP+LDVSV FDAG RRDP K+G A LT Sbjct: 10 LCAACSISQAALQIQSWTLSNGARVLFVENHTIPILDVSVDFDAGSRRDPVGKSGTAALT 69 Query: 73 VASLTRGVEAADG--KPALNEAQILDGFADVAAQQQGGAGQDRAGVSLRSLSSPAERDAA 130 A L RG+ AA +PA+ EAQI D FADVAAQ+ DR+GV+LR+L+S ER+ A Sbjct: 70 NAMLARGLRAAQNPNEPAIGEAQISDAFADVAAQRGARLDDDRSGVTLRTLAS--EREMA 127 Query: 131 LGLLGRMLAHPAFPQAGLERDRALAIANLKEELTKPETIAEKAFMEAAYGSHPYAVDASE 190 L LL R+LA P+FPQ L RD+A +A +KE LT+PE IA+KAF YG+HPY + Sbjct: 128 LALLARLLAQPSFPQEFLLRDKARTVATIKESLTQPEAIADKAFARLLYGTHPYGAQPTV 187 Query: 191 ASLQAITREDLLAFHRAHYVANRAVIALIGDITEAQARSIASALTRELPQGSALPALPQV 250 S+ AITR+DLL+FH A+YVANRAV+ALIGDIT A A IA LT+ LPQG+ALP LP V Sbjct: 188 ESITAITRDDLLSFHAAYYVANRAVVALIGDITRADADRIALQLTQRLPQGAALPDLPAV 247 Query: 251 AAPKGVERRIAHPASQSHILIGAPAIQRGDNDFFALTVGNYVLGGGGFVSRLTDEVREKR 310 A +G E RI H A+Q+HIL+G PA+ R D D FALTVGNYVLGGGGF SRL +VREKR Sbjct: 248 PAAQGREERIPHQATQAHILLGMPALARHDPDHFALTVGNYVLGGGGFASRLMQQVREKR 307 Query: 311 GLSYSVYSYFSPLAQPGPFQIGLQTKKEQTAEALRVTRATLDKFLQEGPTAAELKAAKDN 370 GL+Y V SYF+P+AQ GPFQIGLQTKKEQ EAL+VTR TL +L+EGP+AAELKAAKDN Sbjct: 308 GLTYGVSSYFNPMAQAGPFQIGLQTKKEQAGEALKVTRDTLADYLREGPSAAELKAAKDN 367 Query: 371 LAGGFALRIDSNAKLLENLSVIGFYGLPLDYLDHWIERIRAVSVQDVRAAFRKHVHPEEL 430 L G FALRIDSN K+LEN++ IGFY LPLDYL+ W +I AV+V V+AAF + + ++ Sbjct: 368 LTGSFALRIDSNRKILENIAAIGFYQLPLDYLNTWNAKIAAVTVAQVKAAFNRKLQLDKF 427 Query: 431 STVIVG 436 STVIVG Sbjct: 428 STVIVG 433 >ref|ZP_04577913.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gb|EEO28875.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 422 Score = 448 bits (1152), Expect = e-123, Method: Composition-based stats. Identities = 224/420 (53%), Positives = 306/420 (72%), Gaps = 2/420 (0%) Query: 18 APASAALAIQSWTQPDGARVLFVANHSIPMLDVSVQFDAGQRRDPAAKAGLAELTVASLT 77 +PA AAL IQ W +G++VLFV H+IP+LD+SV+FDAG RRDP K GLA LT SL Sbjct: 3 SPALAALPIQQWMTENGSKVLFVETHAIPVLDISVEFDAGSRRDPEGKNGLAVLTNGSLD 62 Query: 78 RGVEAADGKPALNEAQILDGFADVAAQQQGGAGQDRAGVSLRSLSSPAERDAALGLLGRM 137 +G+ G ++E++ILD FAD A + DRAG +LR LS AE A+ L+ R+ Sbjct: 63 KGILPIYGD-GVSESKILDTFADTGALRSSKITMDRAGYTLRVLSDQAESKKAIELMSRL 121 Query: 138 LAHPAFPQAGLERDRALAIANLKEELTKPETIAEKAFMEAAYGSHPYAVDASEASLQAIT 197 LA P+FP+ LERD+ +A++KEE+T+PE IA K F + Y HPY S S+ +IT Sbjct: 122 LATPSFPEELLERDKMRLVASIKEEMTRPEAIAVKTFKQDIYHDHPYGKSPSPESVVSIT 181 Query: 198 REDLLAFHRAHYVANRAVIALIGDITEAQARSIASALTRELP-QGSALPALPQVAAPKGV 256 R+DL++FH+ HYVANRAVI+++GDI + +AR IA+ ++R+LP LPALP V G Sbjct: 182 RDDLVSFHKTHYVANRAVISIVGDIDKERAREIAAEISRDLPISHQELPALPIVKTTFGK 241 Query: 257 ERRIAHPASQSHILIGAPAIQRGDNDFFALTVGNYVLGGGGFVSRLTDEVREKRGLSYSV 316 ++HPA+Q+H+L+G PA++RGD DFFALTVGNY+LGGGGF SRL E+REKRGLSYSV Sbjct: 242 TEAVSHPATQAHVLLGMPAVRRGDTDFFALTVGNYILGGGGFSSRLMQEIREKRGLSYSV 301 Query: 317 YSYFSPLAQPGPFQIGLQTKKEQTAEALRVTRATLDKFLQEGPTAAELKAAKDNLAGGFA 376 YS F P+ Q GPF +GLQT+K+Q +AL+VT +TLD FL+EGPTAAEL++AKD+L FA Sbjct: 302 YSKFQPMLQEGPFIVGLQTEKKQADDALKVTHSTLDTFLKEGPTAAELQSAKDHLVNSFA 361 Query: 377 LRIDSNAKLLENLSVIGFYGLPLDYLDHWIERIRAVSVQDVRAAFRKHVHPEELSTVIVG 436 +++D+N K+LE +S+IG+Y LPL+YLD W ++ V+ +DV+AA + + E++ TVIVG Sbjct: 362 MQMDNNRKVLELISLIGYYRLPLNYLDTWTANVKRVTAEDVKAAMNRKLSTEKMVTVIVG 421 >dbj|BAJ78283.1| M16 peptidase subunit [Sphingomonas sp. A1] Length = 436 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 237/426 (55%), Positives = 301/426 (70%), Gaps = 2/426 (0%) Query: 14 FLCSAPASAALAIQSWTQPDGARVLFVANHSIPMLDVSVQFDAGQRRDPAAKAGLAELTV 73 F + A AA+ I+ WT P GA+V +V N ++PMLDV V FDAG R+PA + G+A +T Sbjct: 12 FAATTMAQAAIKIEHWTAPSGAQVYYVENRTLPMLDVQVDFDAGSAREPADQVGVASMTA 71 Query: 74 ASLTRGVEAADGKPALNEAQILDGFADVAAQQQGGAGQDRAGVSLRSLSSPAERDAALGL 133 + + G GK AL+E I D AD+ A+ GGA DRA SLR LSSPAER++AL + Sbjct: 72 SLMDAG--TGSGKSALDENAIADRLADIGARLGGGAEADRASFSLRVLSSPAERNSALTI 129 Query: 134 LGRMLAHPAFPQAGLERDRALAIANLKEELTKPETIAEKAFMEAAYGSHPYAVDASEASL 193 L +LAHP FP LER+RA AIA L+E T+P +I + F E AYG HPY +S A+L Sbjct: 130 LRDILAHPTFPAPVLERERARAIAGLREAQTQPGSILGRRFTELAYGKHPYGHVSSVATL 189 Query: 194 QAITREDLLAFHRAHYVANRAVIALIGDITEAQARSIASALTRELPQGSALPALPQVAAP 253 Q I+R+ L++FHR HYVA AV+ L+GDIT A+A +IA LT +LP G+ LP LP A P Sbjct: 190 QKISRDQLVSFHRTHYVARTAVVTLVGDITRAEAETIAQQLTADLPAGATLPPLPDPAMP 249 Query: 254 KGVERRIAHPASQSHILIGAPAIQRGDNDFFALTVGNYVLGGGGFVSRLTDEVREKRGLS 313 + RIA+PA+Q+HI IG P ++RGD DFF L VGNY LGGGGF SRL E+R+KRGLS Sbjct: 250 RATVERIANPATQAHIAIGMPTLKRGDPDFFPLVVGNYALGGGGFESRLMKEIRDKRGLS 309 Query: 314 YSVYSYFSPLAQPGPFQIGLQTKKEQTAEALRVTRATLDKFLQEGPTAAELKAAKDNLAG 373 Y YSYFSP G FQIG +T+ E+ EA++V TLD FL+EGPT AEL+AAKDNL Sbjct: 310 YGAYSYFSPQKSMGLFQIGFETRAEKADEAVQVANDTLDAFLREGPTDAELQAAKDNLIN 369 Query: 374 GFALRIDSNAKLLENLSVIGFYGLPLDYLDHWIERIRAVSVQDVRAAFRKHVHPEELSTV 433 GFALR+DSNAK+L ++VIG+YGLPLDYLDH+ ER++AV+V+ VR AF +HV E L TV Sbjct: 370 GFALRLDSNAKILGQVAVIGYYGLPLDYLDHYTERVQAVTVEQVREAFARHVKRENLITV 429 Query: 434 IVGEAA 439 +VG A Sbjct: 430 VVGGKA 435