BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5271.p (323 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777515.1| SAM-dependent methyltransferase [Herbaspiril... 556 e-156 ref|YP_001100760.1| hypothetical protein HEAR2513 [Herminiimonas... 468 e-130 ref|YP_001354292.1| hypothetical protein mma_2602 [Janthinobacte... 465 e-129 ref|YP_725486.1| hypothetical protein H16_A0975 [Ralstonia eutro... 461 e-128 ref|YP_583026.1| hypothetical protein Rmet_0871 [Cupriavidus met... 461 e-128 >ref|YP_003777515.1| SAM-dependent methyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ65607.1| SAM-dependent methyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 299 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 280/299 (93%), Positives = 287/299 (95%) Query: 25 MSKPSNPASGRSQSRAKPAAESAPQAHEIRPGQSIELLKELHILTRDGKLNQDSRRKLKQ 84 MSK + A GR +R KPAAESAPQAHEIRPGQSIELLKELHILTRDGKLNQDSRRKLKQ Sbjct: 1 MSKQAPSAPGRQPNRGKPAAESAPQAHEIRPGQSIELLKELHILTRDGKLNQDSRRKLKQ 60 Query: 85 VYHLYQFIEPLLQEVLADHPDVSLVDHGAGKSYLGFILYDLFFKGLAGAPHIYGIETREE 144 VYHLYQFIEPLLQEVL HPDVSLVDHGAGKSYLGFILYDLFFKGL GAPHIYGIETREE Sbjct: 61 VYHLYQFIEPLLQEVLEQHPDVSLVDHGAGKSYLGFILYDLFFKGLPGAPHIYGIETREE 120 Query: 145 LVRKSEELAARLGFGGMSFLNLSVADSITSPSLPEQIDVVTALHACDTATDDAIHFALAK 204 LVRKSEELA+RLGFGGMSFLNLSVADSI+SPSLPE+IDVVTALHACDTATDDAIHFALAK Sbjct: 121 LVRKSEELASRLGFGGMSFLNLSVADSISSPSLPEKIDVVTALHACDTATDDAIHFALAK 180 Query: 205 QARFIVLVPCCQAEVASVLNRNKGKSLANSLTEIWRHPLHTREFGSQVTNVLRCLQLEAH 264 +ARFIVLVPCCQAEVASVLNRNKGKSLANSLTEIWRHPLHTREFGSQVTNVLRCLQLEAH Sbjct: 181 EARFIVLVPCCQAEVASVLNRNKGKSLANSLTEIWRHPLHTREFGSQVTNVLRCLQLEAH 240 Query: 265 GYKVSVTELVGWEHSMKNELIIAQYRDLPRRRPAERLQEVLRTLGLEEMGERFFAPLAA 323 GYKVSVTELVGWEHSMKNELIIAQYRDLPRRRPAERLQEVLRTLGLEEMG+RFFA AA Sbjct: 241 GYKVSVTELVGWEHSMKNELIIAQYRDLPRRRPAERLQEVLRTLGLEEMGQRFFASQAA 299 >ref|YP_001100760.1| hypothetical protein HEAR2513 [Herminiimonas arsenicoxydans] emb|CAL62639.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 293 Score = 468 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 232/284 (81%), Positives = 253/284 (89%), Gaps = 1/284 (0%) Query: 36 SQSRAKPAAESAPQAHEIRPGQSIELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPL 95 S+S+ + QAHEIRPGQSIELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPL Sbjct: 2 SKSQETKKEKETTQAHEIRPGQSIELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPL 61 Query: 96 LQEVLADHPDVSLVDHGAGKSYLGFILYDLFFKGLAGAPHIYGIETREELVRKSEELAAR 155 LQE+ DHPD++L DHGAGKSYLGFILYDLFFK IYGIETR+ELV+KSE LA + Sbjct: 62 LQEIQNDHPDITLADHGAGKSYLGFILYDLFFKERKDNSRIYGIETRDELVQKSEALAKK 121 Query: 156 LGFGGMSFLNLSVADSITSPSLPEQIDVVTALHACDTATDDAIHFALAKQARFIVLVPCC 215 L F GMSFLNLSVA+SITS LPE+ID+VTALHAC+TATDDAIHFAL KQA+FIVLVPCC Sbjct: 122 LDFPGMSFLNLSVAESITSDRLPEKIDIVTALHACNTATDDAIHFALQKQAKFIVLVPCC 181 Query: 216 QAEVASVLNRNKGKSLANS-LTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYKVSVTELV 274 QAEVASVL +NKGK+LA S LTEIWRHPLHTREFGSQVTNVLRCLQLEAHGY+V+VTELV Sbjct: 182 QAEVASVLKKNKGKTLAKSALTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYQVNVTELV 241 Query: 275 GWEHSMKNELIIAQYRDLPRRRPAERLQEVLRTLGLEEMGERFF 318 GWEHSMKNELIIA YRDLPR+RP+ERLQEVL+TLGLEEM RFF Sbjct: 242 GWEHSMKNELIIASYRDLPRKRPSERLQEVLQTLGLEEMQTRFF 285 >ref|YP_001354292.1| hypothetical protein mma_2602 [Janthinobacterium sp. Marseille] gb|ABR90747.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 280 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 229/269 (85%), Positives = 245/269 (91%), Gaps = 1/269 (0%) Query: 51 HEIRPGQSIELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEVLADHPDVSLVD 110 HEIRPGQSIELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQE+ DHPD++L D Sbjct: 5 HEIRPGQSIELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEIQNDHPDITLAD 64 Query: 111 HGAGKSYLGFILYDLFFKGLAGAPHIYGIETREELVRKSEELAARLGFGGMSFLNLSVAD 170 HGAGKSYLGFILYDLFFK IYGIETR+ELV+KSE LA +L F GMSFLNLSVA+ Sbjct: 65 HGAGKSYLGFILYDLFFKERKDNSRIYGIETRDELVQKSEALAQKLDFPGMSFLNLSVAE 124 Query: 171 SITSPSLPEQIDVVTALHACDTATDDAIHFALAKQARFIVLVPCCQAEVASVLNRNKGKS 230 SITS LPE+IDVVTALHAC+TATDDAIHFAL KQA+FIVLVPCCQAEVASVL +NKGK+ Sbjct: 125 SITSDLLPEKIDVVTALHACNTATDDAIHFALKKQAKFIVLVPCCQAEVASVLKKNKGKT 184 Query: 231 LANS-LTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYKVSVTELVGWEHSMKNELIIAQY 289 LA S LTEIWRHPLHTREFGSQVTNVLRCLQLEAHGY+V+VTELVGWEHSMKNELIIA Y Sbjct: 185 LAKSALTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYQVNVTELVGWEHSMKNELIIASY 244 Query: 290 RDLPRRRPAERLQEVLRTLGLEEMGERFF 318 +DLPRRRP ERLQEVL+TLGLEEM RFF Sbjct: 245 KDLPRRRPTERLQEVLQTLGLEEMQPRFF 273 >ref|YP_725486.1| hypothetical protein H16_A0975 [Ralstonia eutropha H16] emb|CAJ92118.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 280 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 234/275 (85%), Positives = 250/275 (90%), Gaps = 2/275 (0%) Query: 51 HEIRPGQSIELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEVLADHPDVSLVD 110 HEIRPGQSIELLKELHILTRDGK+NQDSRRKLKQVYHL+QFIEPLLQEV A+ V+LVD Sbjct: 5 HEIRPGQSIELLKELHILTRDGKMNQDSRRKLKQVYHLFQFIEPLLQEVKAERGRVTLVD 64 Query: 111 HGAGKSYLGFILYDLFFKGLAGAPHIYGIETREELVRKSEELAARLGFGGMSFLNLSVAD 170 HGAGKSYLGFILYDLFFK L HI+GIETREELV+ S+ LAARLGF GMSFLNLSVAD Sbjct: 65 HGAGKSYLGFILYDLFFKALQDDSHIFGIETREELVKTSQALAARLGFAGMSFLNLSVAD 124 Query: 171 SITSPSLPEQIDVVTALHACDTATDDAIHFALAKQARFIVLVPCCQAEVASVLNRNKGKS 230 SITSP LP +DVVTALHAC+TATDDAI FALAKQAR IVLVPCCQAEVASVL ++KGK Sbjct: 125 SITSPQLPPTVDVVTALHACNTATDDAIRFALAKQARHIVLVPCCQAEVASVLRKHKGKL 184 Query: 231 LA-NSLTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYKVSVTELVGWEHSMKNELIIAQY 289 LA N LTEIWRHPLHTREFGSQVTNVLRCLQLEAHGY+VSVTELVGWEHSMKNELIIAQY Sbjct: 185 LAGNPLTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHSMKNELIIAQY 244 Query: 290 RDLPRRRPAERLQEVLRTLGLEEMGERFF-APLAA 323 +DLPRRRPAERL+EVL LGLEEM ERFF AP++A Sbjct: 245 KDLPRRRPAERLEEVLERLGLEEMRERFFTAPVSA 279 >ref|YP_583026.1| hypothetical protein Rmet_0871 [Cupriavidus metallidurans CH34] gb|ABF07757.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 285 Score = 461 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 231/280 (82%), Positives = 251/280 (89%), Gaps = 3/280 (1%) Query: 42 PAAESAPQA--HEIRPGQSIELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEV 99 P + P + +E+RPGQSIELLKELHILTRDGK+NQDSRRKLKQVYHLYQFIEPLL+EV Sbjct: 3 PPQGTTPMSSTYEVRPGQSIELLKELHILTRDGKMNQDSRRKLKQVYHLYQFIEPLLREV 62 Query: 100 LADHPDVSLVDHGAGKSYLGFILYDLFFKGLAGAPHIYGIETREELVRKSEELAARLGFG 159 + VSLVDHGAGKSYLGFIL+DLFFK L + HIYGIETREELV S+ LA+RLGFG Sbjct: 63 KDEKGTVSLVDHGAGKSYLGFILFDLFFKDLKDSSHIYGIETREELVTSSKALASRLGFG 122 Query: 160 GMSFLNLSVADSITSPSLPEQIDVVTALHACDTATDDAIHFALAKQARFIVLVPCCQAEV 219 GMSFLNLSVADSITSP+LP+ IDVVTALHAC+TATDDAIHFALAKQAR IVLVPCCQAEV Sbjct: 123 GMSFLNLSVADSITSPALPQTIDVVTALHACNTATDDAIHFALAKQARHIVLVPCCQAEV 182 Query: 220 ASVLNRNKGKSLA-NSLTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYKVSVTELVGWEH 278 ASVL ++KGK LA N LTEIWRHPLHTREFGSQVTNVLRCLQLEAHGY+VSVTELVGWEH Sbjct: 183 ASVLRKHKGKLLAGNPLTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEH 242 Query: 279 SMKNELIIAQYRDLPRRRPAERLQEVLRTLGLEEMGERFF 318 SMKNELIIAQY+DLPRRRPAERL VL +LGLEE+ ERFF Sbjct: 243 SMKNELIIAQYKDLPRRRPAERLHNVLESLGLEELNERFF 282