BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5261.p (388 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777458.1| GTP-binding protein [Herbaspirillum seropedi... 667 0.0 ref|YP_001354821.1| hypothetical protein mma_3131 [Janthinobacte... 653 0.0 ref|YP_004751266.1| GTP-binding and nucleic acid-binding protein... 652 0.0 ref|YP_001101131.1| GTP-binding protein [Herminiimonas arsenicox... 649 0.0 ref|ZP_08274862.1| GTP-binding and nucleic acid-binding protein ... 626 e-177 >ref|YP_003777458.1| GTP-binding protein [Herbaspirillum seropedicae SmR1] gb|ADJ65550.1| GTP-binding protein [Herbaspirillum seropedicae SmR1] Length = 364 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 358/361 (99%), Positives = 360/361 (99%) Query: 26 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLKALAEIVKP 85 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLKALAEIVKP Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLKALAEIVKP 60 Query: 86 ERILPATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGRVS 145 ERILPATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGRVS Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGRVS 120 Query: 146 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDEAKPVRA 205 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDEAKPVRA Sbjct: 121 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDEAKPVRA 180 Query: 206 LGLDAEEMLLIKPLCLITAKPAMYVANVSDSGFTDNPLLDQLTAYAQEQNAPIVAICAAI 265 LGLDAEEMLLIKPLCLITAKPAMYVANVSDSGFTDNPLLDQLTAYA+EQNAPIVAICAAI Sbjct: 181 LGLDAEEMLLIKPLCLITAKPAMYVANVSDSGFTDNPLLDQLTAYAKEQNAPIVAICAAI 240 Query: 266 EAEIADLDDADKADFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPVGAT 325 EAEIADLDDADKADFLADMGMEEPGLDRLIRAAF+LLGLQTYFTAGVKEVRAWTVPVGAT Sbjct: 241 EAEIADLDDADKADFLADMGMEEPGLDRLIRAAFRLLGLQTYFTAGVKEVRAWTVPVGAT 300 Query: 326 GPQAAGVIHTDFERGFIRAQTIAFEDFIAFKGETGAKEAGKMRAEGKEYVVKDGDVMNFL 385 GPQAAGVIHTDFERGFIRAQTIAFEDFIAFKGE GAKEAGKMRAEGKEYVVKDGDVMNFL Sbjct: 301 GPQAAGVIHTDFERGFIRAQTIAFEDFIAFKGEAGAKEAGKMRAEGKEYVVKDGDVMNFL 360 Query: 386 F 386 F Sbjct: 361 F 361 >ref|YP_001354821.1| hypothetical protein mma_3131 [Janthinobacterium sp. Marseille] gb|ABR89477.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 363 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 327/363 (90%), Positives = 349/363 (96%) Query: 26 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLKALAEIVKP 85 MSLKCGIVGLPNVGKSTLFNALTKAGI AENYPFCTIEPNVG+VEVPDPRL+ALAEIVKP Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKP 60 Query: 86 ERILPATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGRVS 145 ERILPATVEFVDIAGLVAGASKGEGLGNQFL+HIRETDAIVNVVRCFED NVIHVAG+++ Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGKIN 120 Query: 146 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDEAKPVRA 205 PLDDI VIQTELALADMGTVEKAIHRE KKARSGDKDA+KLVALLERIMP LDEAKPVRA Sbjct: 121 PLDDIEVIQTELALADMGTVEKAIHRENKKARSGDKDASKLVALLERIMPHLDEAKPVRA 180 Query: 206 LGLDAEEMLLIKPLCLITAKPAMYVANVSDSGFTDNPLLDQLTAYAQEQNAPIVAICAAI 265 +GLD EEM LIKPLCLITAKPAMYV NVSDSGFTDNPLLDQLTAYA+ QNAP+VAICAAI Sbjct: 181 MGLDKEEMELIKPLCLITAKPAMYVGNVSDSGFTDNPLLDQLTAYAKSQNAPVVAICAAI 240 Query: 266 EAEIADLDDADKADFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPVGAT 325 E+EIADL++ADK +FLADMGMEEPGLDRLIRA FKLLGLQ+YFTAGVKEVRAWT+PVGAT Sbjct: 241 ESEIADLEEADKKEFLADMGMEEPGLDRLIRAGFKLLGLQSYFTAGVKEVRAWTIPVGAT 300 Query: 326 GPQAAGVIHTDFERGFIRAQTIAFEDFIAFKGETGAKEAGKMRAEGKEYVVKDGDVMNFL 385 PQAAGVIHTDFERGFIRAQTI++ED+I +KGE GAKEAGKMRAEGKEY+VKDGDV+NFL Sbjct: 301 APQAAGVIHTDFERGFIRAQTISYEDYITYKGENGAKEAGKMRAEGKEYIVKDGDVLNFL 360 Query: 386 FNV 388 FNV Sbjct: 361 FNV 363 >ref|YP_004751266.1| GTP-binding and nucleic acid-binding protein [Collimonas fungivorans Ter331] gb|AEK60443.1| GTP-binding and nucleic acid-binding protein [Collimonas fungivorans Ter331] Length = 363 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 332/363 (91%), Positives = 348/363 (95%) Query: 26 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLKALAEIVKP 85 MSLKCGIVGLPNVGKSTLFNALTKAGI AENYPFCTIEPNVG+VEVPDPRLKALAEIVKP Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLKALAEIVKP 60 Query: 86 ERILPATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGRVS 145 ERILPATVEFVDIAGLVAGASKGEGLGNQFL+HIRETDAIVNVVRCFED NVIHVAG+++ Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGKIN 120 Query: 146 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDEAKPVRA 205 PLDDI VIQTELALADMGTVEKAIHRE KKARSGDKDAAKLVALLER+MP LD+AKPVRA Sbjct: 121 PLDDIDVIQTELALADMGTVEKAIHRENKKARSGDKDAAKLVALLERLMPELDQAKPVRA 180 Query: 206 LGLDAEEMLLIKPLCLITAKPAMYVANVSDSGFTDNPLLDQLTAYAQEQNAPIVAICAAI 265 GLDAEEM LIKPLCLITAKPAMYVANVSD GFT+NPLLDQLTAYA QNAPIVAICAAI Sbjct: 181 CGLDAEEMALIKPLCLITAKPAMYVANVSDHGFTNNPLLDQLTAYAASQNAPIVAICAAI 240 Query: 266 EAEIADLDDADKADFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPVGAT 325 E+EIADLD+ADK +FLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWT+ VG T Sbjct: 241 ESEIADLDEADKHEFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTIHVGDT 300 Query: 326 GPQAAGVIHTDFERGFIRAQTIAFEDFIAFKGETGAKEAGKMRAEGKEYVVKDGDVMNFL 385 GPQAAGVIHTDFERGFIRAQTIA++DFI+ KGE GAKEAGKMRAEGKEYVVKDGDV+NFL Sbjct: 301 GPQAAGVIHTDFERGFIRAQTIAYDDFISHKGEQGAKEAGKMRAEGKEYVVKDGDVLNFL 360 Query: 386 FNV 388 FNV Sbjct: 361 FNV 363 >ref|YP_001101131.1| GTP-binding protein [Herminiimonas arsenicoxydans] emb|CAL63010.1| GTP-dependent nucleic acid-binding protein EngD [Herminiimonas arsenicoxydans] Length = 363 Score = 649 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 326/363 (89%), Positives = 346/363 (95%) Query: 26 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLKALAEIVKP 85 MSLKCGIVGLPNVGKSTLFNALTKAGI AENYPFCTIEPNVG+VEVPDPRL+ALAEIVKP Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKP 60 Query: 86 ERILPATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGRVS 145 ERILPATVEFVDIAGLVAGASKGEGLGNQFL+HIRETDAIVNVVRCFED NVIHVAG+++ Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGKIN 120 Query: 146 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDEAKPVRA 205 PLDDI VIQTELALADMGTVEKAIHRE KKARSGDKDA KLVALLERIMP LDEAKPVRA Sbjct: 121 PLDDIEVIQTELALADMGTVEKAIHRENKKARSGDKDAGKLVALLERIMPHLDEAKPVRA 180 Query: 206 LGLDAEEMLLIKPLCLITAKPAMYVANVSDSGFTDNPLLDQLTAYAQEQNAPIVAICAAI 265 +GLD EEM LIKPLCLITAKPAMYV NVSDSGFT+NPLLDQLT YA+ QNAP+VAICAAI Sbjct: 181 MGLDKEEMELIKPLCLITAKPAMYVGNVSDSGFTNNPLLDQLTEYAKSQNAPVVAICAAI 240 Query: 266 EAEIADLDDADKADFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPVGAT 325 E+EIA+LD+ADK +FLADMGMEEPGLDRLIRA FKLLGLQ+YFTAGVKEVRAWT+ VG T Sbjct: 241 ESEIAELDEADKKEFLADMGMEEPGLDRLIRAGFKLLGLQSYFTAGVKEVRAWTIHVGDT 300 Query: 326 GPQAAGVIHTDFERGFIRAQTIAFEDFIAFKGETGAKEAGKMRAEGKEYVVKDGDVMNFL 385 GPQAAGVIHTDFERG+IRAQTIA+EDFI FKGE GAKEAGKMRAEGKEY+VKDGDV+NFL Sbjct: 301 GPQAAGVIHTDFERGYIRAQTIAYEDFIKFKGEQGAKEAGKMRAEGKEYIVKDGDVLNFL 360 Query: 386 FNV 388 FNV Sbjct: 361 FNV 363 >ref|ZP_08274862.1| GTP-binding and nucleic acid-binding protein YchF [Oxalobacteraceae bacterium IMCC9480] gb|EGF31666.1| GTP-binding and nucleic acid-binding protein YchF [Oxalobacteraceae bacterium IMCC9480] Length = 363 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 315/363 (86%), Positives = 340/363 (93%) Query: 26 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLKALAEIVKP 85 MSLKCGIVGLPNVGKSTLFNALTKAGI AENYPFCTIEPNVG+VEVPDPR+ AL+EIVKP Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRMDALSEIVKP 60 Query: 86 ERILPATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGRVS 145 +R +P TVEFVDIAGLVAGASKGEGLGNQFL+HIRETDAIVNVVRCFED NVIHVAGR++ Sbjct: 61 QRAVPTTVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGRIN 120 Query: 146 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDEAKPVRA 205 PLDDI VIQTELALADM VEKAIHRE KKARSGDKDAAKLV +LERIMP LD A PVRA Sbjct: 121 PLDDIEVIQTELALADMAAVEKAIHRESKKARSGDKDAAKLVVILERIMPQLDLALPVRA 180 Query: 206 LGLDAEEMLLIKPLCLITAKPAMYVANVSDSGFTDNPLLDQLTAYAQEQNAPIVAICAAI 265 +GLDAEEM LIKPLCLITAKPAMYV NVSD+GFT+NPLLDQLT YA++QNAP+VAICAAI Sbjct: 181 MGLDAEEMALIKPLCLITAKPAMYVGNVSDTGFTNNPLLDQLTEYAKKQNAPVVAICAAI 240 Query: 266 EAEIADLDDADKADFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPVGAT 325 E+EI+DL+DADKA+FLADMGM EPGLDRLIR+A+ LLGLQTYFTAGVKEVRAWT+ VG T Sbjct: 241 ESEISDLEDADKAEFLADMGMTEPGLDRLIRSAYTLLGLQTYFTAGVKEVRAWTIHVGDT 300 Query: 326 GPQAAGVIHTDFERGFIRAQTIAFEDFIAFKGETGAKEAGKMRAEGKEYVVKDGDVMNFL 385 PQAAGVIHTDFERGFIRAQTIA+EDFI FKGE GAK+AGKMRAEGKEYVVKDGDV+NFL Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFITFKGEAGAKDAGKMRAEGKEYVVKDGDVLNFL 360 Query: 386 FNV 388 FNV Sbjct: 361 FNV 363