BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5258.p (158 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777455.1| organic solvents resistance ABC transporter ... 268 3e-70 ref|ZP_04577742.1| ABC transporter periplasmic substrate-binding... 225 2e-57 ref|ZP_04579899.1| ABC-type transport system [Oxalobacter formig... 221 2e-56 ref|ZP_08275866.1| Uncharacterized ABC transporter, periplasmic ... 221 3e-56 ref|YP_001354987.1| ABC-type transport system involved in resist... 221 3e-56 >ref|YP_003777455.1| organic solvents resistance ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ65547.1| ABC-type transport system involved in resistance to organic solvents, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 158 Score = 268 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 146/158 (92%), Positives = 153/158 (96%) Query: 1 MQRKTLDVWVGLFVLLGAAALAFLALKVGNMSSMSFGQKTYALKANFDNIGGLKSRAAVK 60 MQRK+LD WVG+FVLLG AAL FLALK GNMSSMSFGQKTY +KA+FDNIGGLKSRAAVK Sbjct: 1 MQRKSLDAWVGIFVLLGVAALVFLALKAGNMSSMSFGQKTYTIKASFDNIGGLKSRAAVK 60 Query: 61 SAGVVVGRVDSIRFDDQTFRAVVTLNMNESYKFPKDSSAKILTSGLLGEQYIGIEPGGDT 120 SAGVVVGRVDSIRFDDQTFRAVV+LNM+ESYKFPKDSSAKILTSGLLGEQYIGIEPGGDT Sbjct: 61 SAGVVVGRVDSIRFDDQTFRAVVSLNMDESYKFPKDSSAKILTSGLLGEQYIGIEPGGDT 120 Query: 121 ANLAAGDTIKMTQSAIVLENLIGQFLYSKAAEGKDDSK 158 ANLA+GDTIKMTQSAIVLENLIGQFLYSKAAEGKDDSK Sbjct: 121 ANLASGDTIKMTQSAIVLENLIGQFLYSKAAEGKDDSK 158 >ref|ZP_04577742.1| ABC transporter periplasmic substrate-binding protein [Oxalobacter formigenes HOxBLS] gb|EEO28704.1| ABC transporter periplasmic substrate-binding protein [Oxalobacter formigenes HOxBLS] Length = 151 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 121/152 (79%), Positives = 132/152 (86%), Gaps = 1/152 (0%) Query: 1 MQRKTLDVWVGLFVLLGAAALAFLALKVGNMSSMSFGQKTYALKANFDNIGGLKSRAAVK 60 MQRK+LD+WVGLFVLLGA AL FLALK GNMSS SF +KTY + + FDNIGGLK RA VK Sbjct: 1 MQRKSLDIWVGLFVLLGAVALMFLALKAGNMSSFSF-EKTYTVSSRFDNIGGLKPRAPVK 59 Query: 61 SAGVVVGRVDSIRFDDQTFRAVVTLNMNESYKFPKDSSAKILTSGLLGEQYIGIEPGGDT 120 SAGVVVGRV I FDDQ FRA+VTL + E YKFPKDSSAKILTSGLLGEQY+GIEPGGD Sbjct: 60 SAGVVVGRVGDISFDDQDFRALVTLQLQERYKFPKDSSAKILTSGLLGEQYVGIEPGGDE 119 Query: 121 ANLAAGDTIKMTQSAIVLENLIGQFLYSKAAE 152 A+LA+GD IKMTQSAIVLENLI QF+YSKAAE Sbjct: 120 ASLASGDQIKMTQSAIVLENLISQFIYSKAAE 151 >ref|ZP_04579899.1| ABC-type transport system [Oxalobacter formigenes OXCC13] gb|EEO30872.1| ABC-type transport system [Oxalobacter formigenes OXCC13] Length = 151 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 118/152 (77%), Positives = 128/152 (84%), Gaps = 1/152 (0%) Query: 1 MQRKTLDVWVGLFVLLGAAALAFLALKVGNMSSMSFGQKTYALKANFDNIGGLKSRAAVK 60 MQRK LD+WVG FVLLGAAAL FLALK GNMSS+SF KTY + + FDNIGGLK RA VK Sbjct: 1 MQRKPLDIWVGFFVLLGAAALMFLALKAGNMSSLSF-DKTYTVSSRFDNIGGLKPRAPVK 59 Query: 61 SAGVVVGRVDSIRFDDQTFRAVVTLNMNESYKFPKDSSAKILTSGLLGEQYIGIEPGGDT 120 SAGVVVGRV I FDDQ +RA+VTL + E YKFPKDSSAKILTSGLLGEQYIGIEPGGD Sbjct: 60 SAGVVVGRVGDISFDDQDYRALVTLQLQEKYKFPKDSSAKILTSGLLGEQYIGIEPGGDE 119 Query: 121 ANLAAGDTIKMTQSAIVLENLIGQFLYSKAAE 152 LA+GD I+MTQSAIVLENLI QF+YSKA E Sbjct: 120 TYLASGDQIQMTQSAIVLENLISQFIYSKATE 151 >ref|ZP_08275866.1| Uncharacterized ABC transporter, periplasmic component YrbD [Oxalobacteraceae bacterium IMCC9480] gb|EGF30662.1| Uncharacterized ABC transporter, periplasmic component YrbD [Oxalobacteraceae bacterium IMCC9480] Length = 157 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 120/158 (75%), Positives = 135/158 (85%), Gaps = 1/158 (0%) Query: 1 MQRKTLDVWVGLFVLLGAAALAFLALKVGNMSSMSFGQKTYALKANFDNIGGLKSRAAVK 60 MQRK+LD+WVGLFVLLGAAAL FLA+K GN+SS+SF Q TY + FDNIGGLK RA VK Sbjct: 1 MQRKSLDLWVGLFVLLGAAALFFLAMKAGNLSSLSFAQ-TYPVTMRFDNIGGLKPRAPVK 59 Query: 61 SAGVVVGRVDSIRFDDQTFRAVVTLNMNESYKFPKDSSAKILTSGLLGEQYIGIEPGGDT 120 SAGVVVGRV I F+DQ F+A VT+NM YKFPKDSSAKILTSGLLGEQYIG+EPGGDT Sbjct: 60 SAGVVVGRVADIAFNDQRFQASVTVNMETRYKFPKDSSAKILTSGLLGEQYIGLEPGGDT 119 Query: 121 ANLAAGDTIKMTQSAIVLENLIGQFLYSKAAEGKDDSK 158 LAAGD I+MTQSA+VLENLI QFL+SKAA+GKD+ K Sbjct: 120 NLLAAGDNIRMTQSALVLENLITQFLFSKAADGKDEKK 157 >ref|YP_001354987.1| ABC-type transport system involved in resistance to organic solvents, periplasmic component [Janthinobacterium sp. Marseille] gb|ABR90200.1| ABC-type transport system involved in resistance to organic solvents, periplasmic component [Janthinobacterium sp. Marseille] Length = 157 Score = 221 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 118/158 (74%), Positives = 133/158 (84%), Gaps = 1/158 (0%) Query: 1 MQRKTLDVWVGLFVLLGAAALAFLALKVGNMSSMSFGQKTYALKANFDNIGGLKSRAAVK 60 MQRK+LD+WVGLFVLLGAAAL FLA+K GNMSS+SF Q Y + FDNIGGLK RA VK Sbjct: 1 MQRKSLDLWVGLFVLLGAAALFFLAMKAGNMSSLSFEQ-VYPVVTRFDNIGGLKPRAPVK 59 Query: 61 SAGVVVGRVDSIRFDDQTFRAVVTLNMNESYKFPKDSSAKILTSGLLGEQYIGIEPGGDT 120 SAGVVVGRV I FDD++++A VTLN+ Y FPKDSSAKILTSGLLGEQY+G+EPGGDT Sbjct: 60 SAGVVVGRVADISFDDKSYQATVTLNIESRYVFPKDSSAKILTSGLLGEQYVGLEPGGDT 119 Query: 121 ANLAAGDTIKMTQSAIVLENLIGQFLYSKAAEGKDDSK 158 NLAAGD I MTQSA+VLENLI QFL+SKA EGK+D K Sbjct: 120 VNLAAGDRITMTQSAMVLENLISQFLFSKATEGKEDQK 157