BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5253.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777450.1| multidrug ABC transporter permease [Herbaspi... 433 e-119 ref|YP_004751171.1| multidrug ABC transporter permease [Collimon... 358 6e-97 ref|YP_001354982.1| ABC-2 type transporter protein [Janthinobact... 357 7e-97 ref|YP_001101303.1| ABC transporter membrane protein [Herminiimo... 352 2e-95 emb|CBJ36649.1| putative ABC transporter permease protein, membr... 350 1e-94 >ref|YP_003777450.1| multidrug ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ65542.1| ABC-type multidrug transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 254 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 253/254 (99%), Positives = 253/254 (99%) Query: 1 MIGFRTLFYKEILRFWKVATQTITAPIVTALLYLLIFGHVLQDRVQVYPGVNYTGFLVPG 60 MIGFRTLFYKEILRFWKVATQTITAPIVTALLYLLIFGHVLQDRVQVYPGVNYTGFLVPG Sbjct: 1 MIGFRTLFYKEILRFWKVATQTITAPIVTALLYLLIFGHVLQDRVQVYPGVNYTGFLVPG 60 Query: 61 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWELFGGYVLAAVVRGLMVGAGVF 120 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWELFGGYVLAAVVRGLMVGAGVF Sbjct: 61 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWELFGGYVLAAVVRGLMVGAGVF 120 Query: 121 VVTVWFGHLDFVAPLWILVFALLGAGILGTMGLIAGIWAEKFDQLAAFQNFLIVPLTFLA 180 VVTVWFGHLDFVAPLWILVFALLGAGILGTMGLIAGIWAEKFDQLAAFQNFLIVPLTFLA Sbjct: 121 VVTVWFGHLDFVAPLWILVFALLGAGILGTMGLIAGIWAEKFDQLAAFQNFLIVPLTFLA 180 Query: 181 GVFYSIHSLPPFWQAVSHFNPFFYMIDGFRYGFFGQSDIPPMTSLGIVAVFFVALSTLAV 240 GVFYSIHSLPPFWQAVSHFNPFFYMIDGFRYGFFGQSDI PMTSLGIVAVFFVALSTLAV Sbjct: 181 GVFYSIHSLPPFWQAVSHFNPFFYMIDGFRYGFFGQSDIAPMTSLGIVAVFFVALSTLAV 240 Query: 241 RMLKSGYKLRAGSH 254 RMLKSGYKLRAGSH Sbjct: 241 RMLKSGYKLRAGSH 254 >ref|YP_004751171.1| multidrug ABC transporter permease [Collimonas fungivorans Ter331] gb|AEK60348.1| ABC-type multidrug transport system, permease component [Collimonas fungivorans Ter331] Length = 252 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 197/250 (78%), Positives = 223/250 (89%) Query: 1 MIGFRTLFYKEILRFWKVATQTITAPIVTALLYLLIFGHVLQDRVQVYPGVNYTGFLVPG 60 MIGF+TLFYKE+LRFWKVATQTI API+TA+LYLLIFGH L+D ++VYPGV YT FL+PG Sbjct: 2 MIGFQTLFYKEVLRFWKVATQTIGAPILTAMLYLLIFGHTLKDHIEVYPGVQYTAFLIPG 61 Query: 61 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWELFGGYVLAAVVRGLMVGAGVF 120 LVMMSVLQNAFAN+SSSL QSK+TGNLVFVLLTPLSHWEL+G YVLA+VVRG+ VG GVF Sbjct: 62 LVMMSVLQNAFANTSSSLTQSKMTGNLVFVLLTPLSHWELYGAYVLASVVRGVAVGLGVF 121 Query: 121 VVTVWFGHLDFVAPLWILVFALLGAGILGTMGLIAGIWAEKFDQLAAFQNFLIVPLTFLA 180 V+T WFG+L FVAP WI++FA LGA +LGTMGLIAG+WA+KFDQLA FQNFLI+P TFLA Sbjct: 122 VITAWFGNLSFVAPWWIVIFAFLGAALLGTMGLIAGVWADKFDQLAVFQNFLIMPATFLA 181 Query: 181 GVFYSIHSLPPFWQAVSHFNPFFYMIDGFRYGFFGQSDIPPMTSLGIVAVFFVALSTLAV 240 GVFYSI SLPPFWQAVSH NPFFYMIDGFRYGFFGQSDI P+ SL I+ +F LS +AV Sbjct: 182 GVFYSIKSLPPFWQAVSHLNPFFYMIDGFRYGFFGQSDINPLISLLIICIFLALLSAVAV 241 Query: 241 RMLKSGYKLR 250 +MLK GYKLR Sbjct: 242 QMLKRGYKLR 251 >ref|YP_001354982.1| ABC-2 type transporter protein [Janthinobacterium sp. Marseille] gb|ABR90787.1| ABC-2 type transporter protein [Janthinobacterium sp. Marseille] Length = 251 Score = 357 bits (917), Expect = 7e-97, Method: Composition-based stats. Identities = 199/250 (79%), Positives = 223/250 (89%) Query: 1 MIGFRTLFYKEILRFWKVATQTITAPIVTALLYLLIFGHVLQDRVQVYPGVNYTGFLVPG 60 MIGF+TLFYKE+LRFWKVATQT+ API+TA+LYLLIFGHVL+D VQVYPGV YT FL+PG Sbjct: 1 MIGFQTLFYKEMLRFWKVATQTVAAPILTAVLYLLIFGHVLEDHVQVYPGVKYTAFLIPG 60 Query: 61 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWELFGGYVLAAVVRGLMVGAGVF 120 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLL PLSHWELF YV+AAVVRGL+VG GVF Sbjct: 61 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLPPLSHWELFSAYVMAAVVRGLVVGTGVF 120 Query: 121 VVTVWFGHLDFVAPLWILVFALLGAGILGTMGLIAGIWAEKFDQLAAFQNFLIVPLTFLA 180 +VT WF + FVAP WIL+FA+LGA +LGTMGLIAGIWAEKFDQLAAFQNFLI+P TFL+ Sbjct: 121 IVTAWFADMSFVAPWWILIFAILGAAMLGTMGLIAGIWAEKFDQLAAFQNFLIMPATFLS 180 Query: 181 GVFYSIHSLPPFWQAVSHFNPFFYMIDGFRYGFFGQSDIPPMTSLGIVAVFFVALSTLAV 240 GVFYS+HSLPPFWQ VSH NPFFYMIDGFRYGFFGQSD+ P+ S +VA F V L+ + + Sbjct: 181 GVFYSVHSLPPFWQTVSHMNPFFYMIDGFRYGFFGQSDVNPLVSSTVVAFFLVLLAGVGM 240 Query: 241 RMLKSGYKLR 250 +LKSGYKLR Sbjct: 241 SLLKSGYKLR 250 >ref|YP_001101303.1| ABC transporter membrane protein [Herminiimonas arsenicoxydans] emb|CAL63182.1| ABC transporter, permease component [Herminiimonas arsenicoxydans] Length = 251 Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats. Identities = 198/250 (79%), Positives = 220/250 (88%) Query: 1 MIGFRTLFYKEILRFWKVATQTITAPIVTALLYLLIFGHVLQDRVQVYPGVNYTGFLVPG 60 M GF+TL YKE+LRFWKVATQT+ API+TA+LYLLIFGHVL++ VQVYPGVNYT FLVPG Sbjct: 1 MSGFQTLLYKEVLRFWKVATQTVAAPILTAVLYLLIFGHVLKNHVQVYPGVNYTTFLVPG 60 Query: 61 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWELFGGYVLAAVVRGLMVGAGVF 120 LVMMSVLQNAFAN+SSSLIQSKITGNLVFVLLTPLSHWE FG YVLAA+VRGL VG GVF Sbjct: 61 LVMMSVLQNAFANASSSLIQSKITGNLVFVLLTPLSHWEFFGAYVLAAMVRGLAVGCGVF 120 Query: 121 VVTVWFGHLDFVAPLWILVFALLGAGILGTMGLIAGIWAEKFDQLAAFQNFLIVPLTFLA 180 +VT WF + FVAP WI +F +LGA +LGT+GLIAG+WAEKFDQLAAFQNF+IVP TFL+ Sbjct: 121 LVTAWFADMSFVAPWWIAIFVILGAALLGTLGLIAGMWAEKFDQLAAFQNFVIVPATFLS 180 Query: 181 GVFYSIHSLPPFWQAVSHFNPFFYMIDGFRYGFFGQSDIPPMTSLGIVAVFFVALSTLAV 240 GVFYSIHSLPP WQ VSHFNPFFYMIDGFRYGFFGQSD+ P+TS VA F + LS AV Sbjct: 181 GVFYSIHSLPPVWQTVSHFNPFFYMIDGFRYGFFGQSDVNPLTSCLAVAGFLLLLSGFAV 240 Query: 241 RMLKSGYKLR 250 +LKSGYKLR Sbjct: 241 YLLKSGYKLR 250 >emb|CBJ36649.1| putative ABC transporter permease protein, membrane component [Ralstonia solanacearum CMR15] Length = 262 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 190/248 (76%), Positives = 220/248 (88%) Query: 3 GFRTLFYKEILRFWKVATQTITAPIVTALLYLLIFGHVLQDRVQVYPGVNYTGFLVPGLV 62 GFRTL YKE+LRFWKV+ QT+ AP++TALLYLLIFGHVL+D VQV+ ++YT FL+PGLV Sbjct: 14 GFRTLLYKEVLRFWKVSFQTVAAPVLTALLYLLIFGHVLEDHVQVFGQISYTAFLIPGLV 73 Query: 63 MMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWELFGGYVLAAVVRGLMVGAGVFVV 122 MMSVLQNAFANSSSSLIQSKITGNLVF++L PLSHWE+FG YV+A+V+RGL VGAGV VV Sbjct: 74 MMSVLQNAFANSSSSLIQSKITGNLVFIMLPPLSHWEMFGAYVVASVIRGLAVGAGVLVV 133 Query: 123 TVWFGHLDFVAPLWILVFALLGAGILGTMGLIAGIWAEKFDQLAAFQNFLIVPLTFLAGV 182 T WF HL F PLWI+VFA+LGA +LGT+GLIAGIWAEKFDQLAAFQNFLIVP TFLAGV Sbjct: 134 TAWFAHLHFAQPLWIIVFAILGAAVLGTLGLIAGIWAEKFDQLAAFQNFLIVPATFLAGV 193 Query: 183 FYSIHSLPPFWQAVSHFNPFFYMIDGFRYGFFGQSDIPPMTSLGIVAVFFVALSTLAVRM 242 FYSIHSLPPFWQAVSH NPFFYMIDGFRYGFFG SD+P TSLG++ + V + +A++M Sbjct: 194 FYSIHSLPPFWQAVSHANPFFYMIDGFRYGFFGVSDVPVATSLGVMVIALVVVGGIALQM 253 Query: 243 LKSGYKLR 250 L++GYKLR Sbjct: 254 LRTGYKLR 261