BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5249.p (325 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777446.1| DNA-methyltransferase [Herbaspirillum serope... 539 e-151 ref|YP_004751176.1| putative DNA-methyltransferase (DNA modifica... 461 e-128 ref|YP_001354977.1| DNA modification methylase [Janthinobacteriu... 461 e-128 ref|YP_001101298.1| putative DNA-methyltransferase [Herminiimona... 451 e-125 ref|ZP_08276110.1| putative DNA-methyltransferase (DNA-modificat... 449 e-124 >ref|YP_003777446.1| DNA-methyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ65538.1| DNA-methyltransferase (DNA-modification methylase) protein [Herbaspirillum seropedicae SmR1] Length = 276 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 265/276 (96%), Positives = 270/276 (97%), Gaps = 3/276 (1%) Query: 49 MTSATDSLAGAGWLDRVFCEDALSATSGLARIPDGSVDLMIADPPYGLGKDYGNDSDKLD 108 M+SATDSLAGAGWLDRVFCEDALSA GLARIPDGSVDLMIADPPYGLGKDYGNDSDKLD Sbjct: 1 MSSATDSLAGAGWLDRVFCEDALSAVGGLARIPDGSVDLMIADPPYGLGKDYGNDSDKLD 60 Query: 109 TAAYLSWTEQWIDAALPKLKPNGSLYIFLTWRNSPEIFVMLKQRMTMINEIIWDRRVPSM 168 TAAYL+WTEQW+DAALPKLKPNGSLYIFLTWRNSPEIFVMLKQRMTMINEIIWDRRVPSM Sbjct: 61 TAAYLAWTEQWVDAALPKLKPNGSLYIFLTWRNSPEIFVMLKQRMTMINEIIWDRRVPSM 120 Query: 169 GGSTRRYSSVHDTIGFFARAKDYFFDLDAIRIPYDAQTKKARSRSIFVGAKWLEMGYNPK 228 GGSTRRYSSVHDTIGFFARAKDYFFDLDAIRIPYDAQTKKARSRSIFVGAKWLEMGYNPK Sbjct: 121 GGSTRRYSSVHDTIGFFARAKDYFFDLDAIRIPYDAQTKKARSRSIFVGAKWLEMGYNPK 180 Query: 229 DVWSVSRLHREHKERADHPTQKPLEVVERMVKASCPPGGVVLDPFMGSGTTAVAARRCGR 288 DVWSVSRLHREHKERADHPTQKPLEVVERMVKASCPPGGVVLDPFMGSGTTAVAARRCGR Sbjct: 181 DVWSVSRLHREHKERADHPTQKPLEVVERMVKASCPPGGVVLDPFMGSGTTAVAARRCGR 240 Query: 289 HFTGFELNPDYCELIRQRLDALDAPAPASQDDESLQ 324 HFTGFELNPDYCELIRQRLDAL APA QDDE+L+ Sbjct: 241 HFTGFELNPDYCELIRQRLDAL---APAHQDDEALR 273 >ref|YP_004751176.1| putative DNA-methyltransferase (DNA modification methylase) [Collimonas fungivorans Ter331] gb|AEK60353.1| putative DNA-methyltransferase (DNA modification methylase) [Collimonas fungivorans Ter331] Length = 269 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 221/258 (85%), Positives = 235/258 (91%), Gaps = 3/258 (1%) Query: 61 WLDRVFCEDALSATSGLARIPDGSVDLMIADPPYGLGKDYGNDSDKLDTAAYLSWTEQWI 120 W+DRVF EDAL GL RIPDGSVDL++ADPPYGLGKDYGNDSDKLDTAAYL WTE+WI Sbjct: 8 WIDRVFGEDALQ---GLQRIPDGSVDLLLADPPYGLGKDYGNDSDKLDTAAYLRWTEEWI 64 Query: 121 DAALPKLKPNGSLYIFLTWRNSPEIFVMLKQRMTMINEIIWDRRVPSMGGSTRRYSSVHD 180 DAALPKLKPNGSLYIFLTWR SPEIFVMLKQRM M NEIIWDRRVPSMGG TRR+SSVHD Sbjct: 65 DAALPKLKPNGSLYIFLTWRFSPEIFVMLKQRMIMNNEIIWDRRVPSMGGGTRRFSSVHD 124 Query: 181 TIGFFARAKDYFFDLDAIRIPYDAQTKKARSRSIFVGAKWLEMGYNPKDVWSVSRLHREH 240 TIGFFA AKDY+FDLDAIRIPYDA+TKKARSRSIFVGAKWLE+GYNPKDVWSVSRLHREH Sbjct: 125 TIGFFACAKDYYFDLDAIRIPYDAETKKARSRSIFVGAKWLELGYNPKDVWSVSRLHREH 184 Query: 241 KERADHPTQKPLEVVERMVKASCPPGGVVLDPFMGSGTTAVAARRCGRHFTGFELNPDYC 300 +ERADHPTQKPLE+VERM+KASCPPGG+VLDPFMGSGTTAVAARRCGR F GFELNP+YC Sbjct: 185 RERADHPTQKPLEIVERMIKASCPPGGIVLDPFMGSGTTAVAARRCGRRFVGFELNPEYC 244 Query: 301 ELIRQRLDALDAPAPASQ 318 LI QRL LD P + Sbjct: 245 ALIEQRLAQLDGQTPGER 262 >ref|YP_001354977.1| DNA modification methylase [Janthinobacterium sp. Marseille] gb|ABR90086.1| DNA modification methylase [Janthinobacterium sp. Marseille] Length = 273 Score = 461 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 216/265 (81%), Positives = 241/265 (90%), Gaps = 10/265 (3%) Query: 61 WLDRVFCEDALSATSGLARIPDGSVDLMIADPPYGLGKDYGNDSDKLDTAAYLSWTEQWI 120 W DR+FCEDAL+ GLARIPD ++DL+IADPPYGLGKDYGNDSDKLD AYLSW EQWI Sbjct: 4 WRDRIFCEDALA---GLARIPDAAIDLIIADPPYGLGKDYGNDSDKLDADAYLSWMEQWI 60 Query: 121 DAALPKLKPNGSLYIFLTWRNSPEIFVMLKQRMTMINEIIWDRRVPSMGGSTRRYSSVHD 180 DAALPKLKPNGSLYIFLTWR SPE+FVMLK+RMTM+NEI+WDRRVPSMGG TR++SSVHD Sbjct: 61 DAALPKLKPNGSLYIFLTWRYSPEVFVMLKKRMTMLNEIVWDRRVPSMGGGTRKFSSVHD 120 Query: 181 TIGFFARAKDYFFDLDAIRIPYDAQTKKARSRSIFVGAKWLEMGYNPKDVWSVSRLHREH 240 TIGFFA+AKDY+FDLDA+RIPYDA+TKKARSRSIFVGAKWLEMGYNPKDVWSVSRLH+EH Sbjct: 121 TIGFFAKAKDYYFDLDAVRIPYDAETKKARSRSIFVGAKWLEMGYNPKDVWSVSRLHKEH 180 Query: 241 KERADHPTQKPLEVVERMVKASCPPGGVVLDPFMGSGTTAVAARRCGRHFTGFELNPDYC 300 +ERADHPTQKPLE+VERM+KASCPPGGVVLDPFMGSGTTA AA+RCGRHF GFELN +YC Sbjct: 181 RERADHPTQKPLEIVERMLKASCPPGGVVLDPFMGSGTTAAAAKRCGRHFVGFELNAEYC 240 Query: 301 ELIRQRLDALD-------APAPASQ 318 E+I +RL AL+ APAP + Sbjct: 241 EMIEKRLQALESIPASNIAPAPGQE 265 >ref|YP_001101298.1| putative DNA-methyltransferase [Herminiimonas arsenicoxydans] emb|CAL63177.1| Putative DNA methylase [Herminiimonas arsenicoxydans] Length = 269 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 213/250 (85%), Positives = 231/250 (92%), Gaps = 3/250 (1%) Query: 61 WLDRVFCEDALSATSGLARIPDGSVDLMIADPPYGLGKDYGNDSDKLDTAAYLSWTEQWI 120 W +RVFCEDAL+ GLARIPD +VDL+IADPPYGLGKDYGNDSDKL AYL W EQWI Sbjct: 4 WRNRVFCEDALA---GLARIPDAAVDLIIADPPYGLGKDYGNDSDKLAAEAYLQWMEQWI 60 Query: 121 DAALPKLKPNGSLYIFLTWRNSPEIFVMLKQRMTMINEIIWDRRVPSMGGSTRRYSSVHD 180 DAALPKLKPNGSLYIFLTWR SPE+FVMLK+RMTMINEIIWDRRVPSMGGSTRR+SSVHD Sbjct: 61 DAALPKLKPNGSLYIFLTWRYSPEVFVMLKKRMTMINEIIWDRRVPSMGGSTRRFSSVHD 120 Query: 181 TIGFFARAKDYFFDLDAIRIPYDAQTKKARSRSIFVGAKWLEMGYNPKDVWSVSRLHREH 240 T+GFFA AKDY+FDLDAIR+PYDA TKKARSRSIFVGAKWLE+GYNPKDVWSVSRLHREH Sbjct: 121 TVGFFAGAKDYYFDLDAIRVPYDAVTKKARSRSIFVGAKWLELGYNPKDVWSVSRLHREH 180 Query: 241 KERADHPTQKPLEVVERMVKASCPPGGVVLDPFMGSGTTAVAARRCGRHFTGFELNPDYC 300 +ERADHPTQKPLE++ERM+KASCPP GVVLDPFMGSGTTAVAA+RCGRHF GFELN +YC Sbjct: 181 RERADHPTQKPLEIIERMLKASCPPDGVVLDPFMGSGTTAVAAKRCGRHFVGFELNAEYC 240 Query: 301 ELIRQRLDAL 310 LI +RL AL Sbjct: 241 ALIEKRLAAL 250 >ref|ZP_08276110.1| putative DNA-methyltransferase (DNA-modification methylase) [Oxalobacteraceae bacterium IMCC9480] gb|EGF30424.1| putative DNA-methyltransferase (DNA-modification methylase) [Oxalobacteraceae bacterium IMCC9480] Length = 258 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 211/256 (82%), Positives = 233/256 (91%), Gaps = 3/256 (1%) Query: 59 AGWLDRVFCEDALSATSGLARIPDGSVDLMIADPPYGLGKDYGNDSDKLDTAAYLSWTEQ 118 A W ++VFCEDAL+ GLARIPDG +DL++ADPPYGLGKDYGNDSDKL TA YL+W E+ Sbjct: 2 ADWQNQVFCEDALA---GLARIPDGVIDLILADPPYGLGKDYGNDSDKLATAEYLAWMER 58 Query: 119 WIDAALPKLKPNGSLYIFLTWRNSPEIFVMLKQRMTMINEIIWDRRVPSMGGSTRRYSSV 178 WIDAALPKLKPNGSLYIFLTWR SPEIFV+LKQRMTM+NEI+WDRRVPSMGG+ R+YSSV Sbjct: 59 WIDAALPKLKPNGSLYIFLTWRYSPEIFVLLKQRMTMVNEIVWDRRVPSMGGTVRKYSSV 118 Query: 179 HDTIGFFARAKDYFFDLDAIRIPYDAQTKKARSRSIFVGAKWLEMGYNPKDVWSVSRLHR 238 HDTIGFFA +KDY+FDLDAIRIPYDA TKKARSRSIFVGAKWLE+GYNPKDVWSVSRLHR Sbjct: 119 HDTIGFFANSKDYYFDLDAIRIPYDAVTKKARSRSIFVGAKWLELGYNPKDVWSVSRLHR 178 Query: 239 EHKERADHPTQKPLEVVERMVKASCPPGGVVLDPFMGSGTTAVAARRCGRHFTGFELNPD 298 EH+ERADHPTQKPLE++ERMVKASCPPGG+VLDPFMGSGTTAVAA+R GR F GFELN D Sbjct: 179 EHRERADHPTQKPLEIIERMVKASCPPGGIVLDPFMGSGTTAVAAKRAGRQFVGFELNAD 238 Query: 299 YCELIRQRLDALDAPA 314 YC +I QRL LD A Sbjct: 239 YCAMIAQRLAQLDTDA 254