BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.5240.p         (69 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777437.1| Sec-independent protein translocase [Herbasp...   102   2e-20
ref|YP_004751184.1| Twin-arginine translocation protein TatA [Co...    96   2e-18
ref|YP_001354969.1| Sec-independent protein translocase protein ...    88   3e-16
ref|YP_585378.1| twin arginine translocase protein A [Cupriavidu...    87   6e-16
ref|ZP_08273736.1| Twin-arginine translocation protein TatA [Oxa...    85   3e-15

>ref|YP_003777437.1| Sec-independent protein translocase [Herbaspirillum seropedicae
          SmR1]
 gb|ADJ65529.1| Sec-independent protein translocase protein [Herbaspirillum
          seropedicae SmR1]
          Length = 67

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 63/69 (91%), Positives = 65/69 (94%), Gaps = 2/69 (2%)

Query: 1  MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSDLGKAVKGFKDGVKGGEEDPAKKDPAIDVQ 60
          MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSDLGKAVKGFKDGVKG EE+  KKD AIDVQ
Sbjct: 1  MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSDLGKAVKGFKDGVKGAEEE--KKDAAIDVQ 58

Query: 61 AKEKDKSGS 69
          AKEKDKSG+
Sbjct: 59 AKEKDKSGT 67


>ref|YP_004751184.1| Twin-arginine translocation protein TatA [Collimonas fungivorans
          Ter331]
 gb|AEK60361.1| Twin-arginine translocation protein TatA [Collimonas fungivorans
          Ter331]
          Length = 76

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 58/69 (84%), Positives = 60/69 (86%)

Query: 1  MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSDLGKAVKGFKDGVKGGEEDPAKKDPAIDVQ 60
          MGSFSIWHWLIVLVIVMLVFGTKK+GNMGSDLGKAVKGFKDGVKG EE  A     IDV 
Sbjct: 8  MGSFSIWHWLIVLVIVMLVFGTKKIGNMGSDLGKAVKGFKDGVKGEEEKQAADKATIDVA 67

Query: 61 AKEKDKSGS 69
          AKEKDKSG+
Sbjct: 68 AKEKDKSGN 76


>ref|YP_001354969.1| Sec-independent protein translocase protein tatE
          [Janthinobacterium sp. Marseille]
 sp|A6T372|TATA_JANMA RecName: Full=Sec-independent protein translocase protein tatA/E
          homolog
 gb|ABR91805.1| Sec-independent protein translocase protein tatE
          [Janthinobacterium sp. Marseille]
          Length = 77

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 10/77 (12%)

Query: 1  MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSDLGKAVKGFKDGVKGGEED-PAKKDPA--- 56
          MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSD+GKAVKGFKDG+KGGE+D PA ++ A   
Sbjct: 1  MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSDVGKAVKGFKDGMKGGEDDKPAAQNAAPSQ 60

Query: 57 ------IDVQAKEKDKS 67
                +DV+ KEK  S
Sbjct: 61 VADKGTVDVEVKEKSNS 77


>ref|YP_585378.1| twin arginine translocase protein A [Cupriavidus metallidurans
          CH34]
 sp|Q1LIB7|TATA_RALME RecName: Full=Sec-independent protein translocase protein tatA/E
          homolog
 gb|ABF10109.1| TatABCE protein translocation system subunit [Cupriavidus
          metallidurans CH34]
          Length = 77

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 52/75 (69%), Positives = 56/75 (74%), Gaps = 9/75 (12%)

Query: 1  MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSDLGKAVKGFKDGVKGGEED-PAKKDPA--- 56
          MGSFSIWHWLIVLVIVMLVFGTKKL N+G DLG AVKGFKDG+K G  D PA   PA   
Sbjct: 1  MGSFSIWHWLIVLVIVMLVFGTKKLRNIGQDLGGAVKGFKDGMKEGNTDEPATPTPAKEL 60

Query: 57 -----IDVQAKEKDK 66
               IDV+AKEK +
Sbjct: 61 RDSTTIDVEAKEKSR 75


>ref|ZP_08273736.1| Twin-arginine translocation protein TatA [Oxalobacteraceae
          bacterium IMCC9480]
 gb|EGF32814.1| Twin-arginine translocation protein TatA [Oxalobacteraceae
          bacterium IMCC9480]
          Length = 78

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 55/78 (70%), Positives = 58/78 (74%), Gaps = 11/78 (14%)

Query: 1  MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSDLGKAVKGFKDGVKGGEEDPAKK------- 53
          MGSFSIWHWLIVLVIVMLVFGTKK+G+MGSDLGKAVKGFKDGVKG EE  A +       
Sbjct: 1  MGSFSIWHWLIVLVIVMLVFGTKKIGSMGSDLGKAVKGFKDGVKGDEEADATEANKTTTA 60

Query: 54 ----DPAIDVQAKEKDKS 67
                 IDV AKEK KS
Sbjct: 61 KSADKATIDVDAKEKTKS 78