BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5233.p (157 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777428.1| large conductance mechanosensitive channel p... 232 2e-59 ref|YP_004751317.1| large-conductance mechanosensitive channel [... 194 5e-48 ref|YP_001101283.1| large-conductance mechanosensitive channel [... 183 9e-45 ref|ZP_08273731.1| Large-conductance mechanosensitive channel [O... 181 5e-44 ref|YP_001020045.1| large-conductance mechanosensitive channel [... 163 8e-39 >ref|YP_003777428.1| large conductance mechanosensitive channel protein [Herbaspirillum seropedicae SmR1] gb|ADJ65520.1| large conductance mechanosensitive channel protein [Herbaspirillum seropedicae SmR1] Length = 145 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 142/145 (97%), Positives = 144/145 (99%) Query: 13 MSMLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMPLVGKIFGGLDFANYYLP 72 MSMLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMP+VGKIFGGLDFANYYLP Sbjct: 1 MSMLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMPIVGKIFGGLDFANYYLP 60 Query: 73 LNGQAYGLPLAEAKKAGAVFAYGNFLTIFINFLILAFIIFQMVRAINKARDLASKHEEAA 132 LNGQAYGLPLAEA+KAGAVFAYGNFLTI INFLILAFIIFQMVRAINKARDLASKHEEAA Sbjct: 61 LNGQAYGLPLAEARKAGAVFAYGNFLTILINFLILAFIIFQMVRAINKARDLASKHEEAA 120 Query: 133 PAAPAPTPEDVLLLREIRDSLKKQG 157 PAAPAPTPEDVLLLREIRDSLKKQG Sbjct: 121 PAAPAPTPEDVLLLREIRDSLKKQG 145 >ref|YP_004751317.1| large-conductance mechanosensitive channel [Collimonas fungivorans Ter331] gb|AEK60494.1| Large-conductance mechanosensitive channel [Collimonas fungivorans Ter331] Length = 146 Score = 194 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 105/150 (70%), Positives = 121/150 (80%), Gaps = 7/150 (4%) Query: 6 LSKEKPGMSMLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMPLVGKIFGGLD 65 L EK M M+++F+ FA+KGNV+DLAVGVIIGGAFGKIV SLV+DIIMP+VGKIFGGLD Sbjct: 4 LVMEKQHMGMMQEFKTFALKGNVMDLAVGVIIGGAFGKIVDSLVQDIIMPVVGKIFGGLD 63 Query: 66 FANYYLPLNGQAYGLPLAEAKKAGAVFAYGNFLTIFINFLILAFIIFQMVRAINKARDLA 125 FAN+Y PLNGQ+ L LAEAKKAGAV AYGNF+TI +NF+ILAF+IFQMVR INK R Sbjct: 64 FANHYFPLNGQSTELTLAEAKKAGAVLAYGNFITIALNFVILAFVIFQMVRVINKLRG-- 121 Query: 126 SKHEEAAPAAPAPTPEDVLLLREIRDSLKK 155 P APA PE+ +LLREIRDSLKK Sbjct: 122 -----EQPPAPAADPENTVLLREIRDSLKK 146 >ref|YP_001101283.1| large-conductance mechanosensitive channel [Herminiimonas arsenicoxydans] sp|A4G9H5|MSCL_HERAR RecName: Full=Large-conductance mechanosensitive channel emb|CAL63162.1| Large-conductance mechanosensitive channel [Herminiimonas arsenicoxydans] Length = 137 Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats. Identities = 103/144 (71%), Positives = 119/144 (82%), Gaps = 8/144 (5%) Query: 13 MSMLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMPLVGKIFGGLDFANYYLP 72 M M+++F+AFA+KGNVVDLAV VIIGGAFGKIV SLV+DIIMP+VGKIFGGLDF+NYYLP Sbjct: 1 MGMMQEFKAFAVKGNVVDLAVAVIIGGAFGKIVDSLVQDIIMPVVGKIFGGLDFSNYYLP 60 Query: 73 LNGQAYGLPLAEAKKAGAVFAYGNFLTIFINFLILAFIIFQMVRAINKARDLASKHEEAA 132 LN Q L L EAKK GAVFAYG+F+TI INFLILAFIIFQMVR + SK + + Sbjct: 61 LNNQDISLTLVEAKKLGAVFAYGSFITILINFLILAFIIFQMVRML-------SKLKRSE 113 Query: 133 PAAPAP-TPEDVLLLREIRDSLKK 155 P A AP TPE+V+LLREIRD+LKK Sbjct: 114 PPAEAPATPEEVVLLREIRDALKK 137 >ref|ZP_08273731.1| Large-conductance mechanosensitive channel [Oxalobacteraceae bacterium IMCC9480] gb|EGF32809.1| Large-conductance mechanosensitive channel [Oxalobacteraceae bacterium IMCC9480] Length = 139 Score = 181 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 101/143 (70%), Positives = 118/143 (82%), Gaps = 4/143 (2%) Query: 13 MSMLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMPLVGKIFGGLDFANYYLP 72 M M+++F+ FA+KGNV+DLAVGVIIG AFGKIV S+V+D+IMP+V IFGGLDFANYY+P Sbjct: 1 MGMMQEFKTFAVKGNVMDLAVGVIIGAAFGKIVDSVVQDLIMPIVSTIFGGLDFANYYIP 60 Query: 73 LNGQAYGLPLAEAKKAGAVFAYGNFLTIFINFLILAFIIFQMVRAINKARDLASKHEEAA 132 LNGQ L L EAKKAGAV AYGNFLTI INFLILAFIIFQM+R +N AR + + A Sbjct: 61 LNGQGMQLSLVEAKKAGAVLAYGNFLTISINFLILAFIIFQMIRLVNAAR----RKQPAP 116 Query: 133 PAAPAPTPEDVLLLREIRDSLKK 155 APA TPEDVLLLREIRD+L+K Sbjct: 117 APAPAVTPEDVLLLREIRDALRK 139 >ref|YP_001020045.1| large-conductance mechanosensitive channel [Methylibium petroleiphilum PM1] sp|A2SE21|MSCL_METPP RecName: Full=Large-conductance mechanosensitive channel gb|ABM93810.1| large conductance mechanosensitive channel [Methylibium petroleiphilum PM1] Length = 137 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 94/143 (65%), Positives = 116/143 (81%), Gaps = 6/143 (4%) Query: 13 MSMLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMPLVGKIFGGLDFANYYLP 72 MS +F+ FA+KGNV+DLAVGVIIGGAFGKIV S+V D+IMP+V K+FGGLDF+NYY+ Sbjct: 1 MSFFSEFKEFAVKGNVIDLAVGVIIGGAFGKIVDSIVGDLIMPIVSKLFGGLDFSNYYVG 60 Query: 73 LNGQAYGLPLAEAKKAGAVFAYGNFLTIFINFLILAFIIFQMVRAINKARDLASKHEEAA 132 L GQA GLPLAEAKKAGAVFAYGNF+T+ +NF ILAFIIF M++ IN+ + ++ Sbjct: 61 LAGQAAGLPLAEAKKAGAVFAYGNFITVALNFAILAFIIFLMIKQINRLK------KDEP 114 Query: 133 PAAPAPTPEDVLLLREIRDSLKK 155 A PAP ED++LLREIRD+LKK Sbjct: 115 AAPPAPPAEDIVLLREIRDALKK 137