BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5232.p (202 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777427.1| transmembrane ubiquinol-cytochrome C reducta... 394 e-108 ref|YP_001354961.1| ubiquinol-cytochrome c reductase iron-sulfur... 346 1e-93 ref|YP_001101282.1| ubiquinol-cytochrome c reductase iron-sulfur... 328 3e-88 ref|ZP_08273730.1| Ubiquinol-cytochrome C reductase iron-sulfur ... 316 1e-84 ref|YP_004751318.1| Ubiquinol-cytochrome C reductase iron-sulfur... 295 2e-78 >ref|YP_003777427.1| transmembrane ubiquinol-cytochrome C reductase [Herbaspirillum seropedicae SmR1] emb|CAM32682.1| Transmembrane ubiquinol-cytochrome C reductase (Iron-sulfur subunit) oxidoreductase protein [Herbaspirillum seropedicae] gb|ADJ65519.1| transmembrane ubiquinol-cytochrome C reductase (Iron-sulfur subunit) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 202 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 195/202 (96%), Positives = 200/202 (99%) Query: 1 MTDENQVDASRRGLLVATCAAGGVAGLATAGAFVSTLQPSERAKAAGAPVEVDISSLAPG 60 MTDENQVDASRRGLLVATCAAGGVAGLATAGAFVSTLQPSERAKAAGAPVEVDISSLAPG Sbjct: 1 MTDENQVDASRRGLLVATCAAGGVAGLATAGAFVSTLQPSERAKAAGAPVEVDISSLAPG 60 Query: 61 EMRTVEWRGKPVWILKRTPEMIESLKKTDGEVADPNSKRTDFSETPDYALNEWRSLRKDI 120 EMRTVEWRGKPVWILKRTPEM++SLKKTDGEVADPNSKRTDFSETPDYALNEWRS+RKDI Sbjct: 61 EMRTVEWRGKPVWILKRTPEMVDSLKKTDGEVADPNSKRTDFSETPDYALNEWRSIRKDI 120 Query: 121 LVVVGICPHLGCSPSSRFQSGPQPSLPDDWHGGFLCPCHGSTFDLAGRVYKNKPAPDNLQ 180 LVVVGICPHLGCSPSSRFQ+G QPSLPD+W GGFLCPCHGSTFDLAGRVYKNKPAPDNLQ Sbjct: 121 LVVVGICPHLGCSPSSRFQTGAQPSLPDNWQGGFLCPCHGSTFDLAGRVYKNKPAPDNLQ 180 Query: 181 VPRYMFEGDNKLVIGKDEKGEA 202 VPRYMFEGDNKLVIGKDEKGEA Sbjct: 181 VPRYMFEGDNKLVIGKDEKGEA 202 >ref|YP_001354961.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Janthinobacterium sp. Marseille] gb|ABR89245.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Janthinobacterium sp. Marseille] Length = 202 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 168/202 (83%), Positives = 183/202 (90%) Query: 1 MTDENQVDASRRGLLVATCAAGGVAGLATAGAFVSTLQPSERAKAAGAPVEVDISSLAPG 60 M++E QVD+ RRGLLVATCAAGGVAGLAT G VST QPSERAKAAGAPVEVDISSLAPG Sbjct: 1 MSNEKQVDSGRRGLLVATCAAGGVAGLATTGVLVSTFQPSERAKAAGAPVEVDISSLAPG 60 Query: 61 EMRTVEWRGKPVWILKRTPEMIESLKKTDGEVADPNSKRTDFSETPDYALNEWRSLRKDI 120 EM+TVEWRG PVWILKRTPE + +L KTD E+ADP S RT FS TP+YALNEWRS +KD+ Sbjct: 61 EMKTVEWRGNPVWILKRTPEQVAALGKTDNELADPESARTQFSTTPEYALNEWRSRQKDL 120 Query: 121 LVVVGICPHLGCSPSSRFQSGPQPSLPDDWHGGFLCPCHGSTFDLAGRVYKNKPAPDNLQ 180 LVVVGICPHLGCSP+++FQ+G QPSLPDDWHGGFLCPCHGSTFDLAGRVYKNKP+PDNLQ Sbjct: 121 LVVVGICPHLGCSPTAKFQTGAQPSLPDDWHGGFLCPCHGSTFDLAGRVYKNKPSPDNLQ 180 Query: 181 VPRYMFEGDNKLVIGKDEKGEA 202 VP YMFEGD KLVIGKDEKGEA Sbjct: 181 VPPYMFEGDTKLVIGKDEKGEA 202 >ref|YP_001101282.1| ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein) (RISP) (partial) [Herminiimonas arsenicoxydans] emb|CAL63161.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein) (RISP) [Herminiimonas arsenicoxydans] Length = 202 Score = 328 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 159/202 (78%), Positives = 179/202 (88%) Query: 1 MTDENQVDASRRGLLVATCAAGGVAGLATAGAFVSTLQPSERAKAAGAPVEVDISSLAPG 60 M++E QVD+ RRGLLVATCAAGGVAGLAT G VST QPSERAKAAGAPVEVDI+ L PG Sbjct: 1 MSNEKQVDSGRRGLLVATCAAGGVAGLATTGVLVSTFQPSERAKAAGAPVEVDIAGLVPG 60 Query: 61 EMRTVEWRGKPVWILKRTPEMIESLKKTDGEVADPNSKRTDFSETPDYALNEWRSLRKDI 120 EM+TVEWRGKPVWILKR+PEMI +LK+TD EVADPNS+R TP+YA NE+RS++ +I Sbjct: 61 EMKTVEWRGKPVWILKRSPEMIATLKQTDAEVADPNSERKPDELTPEYARNEYRSIKPEI 120 Query: 121 LVVVGICPHLGCSPSSRFQSGPQPSLPDDWHGGFLCPCHGSTFDLAGRVYKNKPAPDNLQ 180 LV VGIC HLGCSP +RFQ+G QPSLPDDWHGGFLCPCHGSTFDLAGRV+KNKPAPDNL+ Sbjct: 121 LVAVGICTHLGCSPVTRFQTGAQPSLPDDWHGGFLCPCHGSTFDLAGRVFKNKPAPDNLE 180 Query: 181 VPRYMFEGDNKLVIGKDEKGEA 202 VPR+MF D+KLVIGKDEKGEA Sbjct: 181 VPRHMFLSDSKLVIGKDEKGEA 202 >ref|ZP_08273730.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF32808.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Oxalobacteraceae bacterium IMCC9480] Length = 204 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 158/204 (77%), Positives = 176/204 (86%), Gaps = 2/204 (0%) Query: 1 MTDENQVDASRRGLLVATCAAGGVAGLATAGAFVSTLQPSERAKAAGAPVEVDISSLAPG 60 M++E QVD+ RRGLLVATCAAGGVAGLATAGA VST PSERAKAAGA VEVDIS L PG Sbjct: 1 MSNEKQVDSGRRGLLVATCAAGGVAGLATAGALVSTFAPSERAKAAGASVEVDISGLVPG 60 Query: 61 EMRTVEWRGKPVWILKRTPEMIESLK--KTDGEVADPNSKRTDFSETPDYALNEWRSLRK 118 EM+TVEWRGKPVWILKRTP+M+ SLK K D E+ADP+S+R TP+YA NE+RS++ Sbjct: 61 EMKTVEWRGKPVWILKRTPDMMASLKDTKNDNELADPHSERNKDELTPEYARNEFRSIKP 120 Query: 119 DILVVVGICPHLGCSPSSRFQSGPQPSLPDDWHGGFLCPCHGSTFDLAGRVYKNKPAPDN 178 ILV VGIC HLGCSP ++FQ GPQPSLP+DW GGFLCPCHGSTFDLAGRVYKNKPAPDN Sbjct: 121 TILVAVGICSHLGCSPGTKFQPGPQPSLPNDWEGGFLCPCHGSTFDLAGRVYKNKPAPDN 180 Query: 179 LQVPRYMFEGDNKLVIGKDEKGEA 202 LQVPR+MF GD K+VIGKDEKGEA Sbjct: 181 LQVPRHMFVGDGKIVIGKDEKGEA 204 >ref|YP_004751318.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Collimonas fungivorans Ter331] gb|AEK60495.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Collimonas fungivorans Ter331] Length = 206 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 148/206 (71%), Positives = 168/206 (81%), Gaps = 4/206 (1%) Query: 1 MTDENQVDASRRGLLVATCAAGGVAGLATAGAFVSTLQPSERAKAAGAPVEVDISSLAPG 60 M+ E QVD+ RRGLLVATCAAGGVAGLATAGAFVST QPSERAKAAGAPVEVDIS + PG Sbjct: 1 MSIEKQVDSGRRGLLVATCAAGGVAGLATAGAFVSTFQPSERAKAAGAPVEVDISGIKPG 60 Query: 61 EMRTVEWRGKPVWILKRTPEMIESLKKTDGEVADPNSKRTDFSETPDYALNE----WRSL 116 EM+ EWRGKPVWI+KRTPE ++ L+ T EVADP S + + PDY N+ R+ Sbjct: 61 EMQVFEWRGKPVWIMKRTPEQLKGLEHTASEVADPESLKPYTMDLPDYCKNKSNNRGRAG 120 Query: 117 RKDILVVVGICPHLGCSPSSRFQSGPQPSLPDDWHGGFLCPCHGSTFDLAGRVYKNKPAP 176 ++ LV+VGICPHLGCSPSS+F G QPSLPDDW GGFLCPCHGSTFDLAGRV+KNKPAP Sbjct: 121 HEETLVLVGICPHLGCSPSSKFAPGAQPSLPDDWQGGFLCPCHGSTFDLAGRVFKNKPAP 180 Query: 177 DNLQVPRYMFEGDNKLVIGKDEKGEA 202 +NL VPRYM+ D K+VIGKDEKGEA Sbjct: 181 NNLDVPRYMYLSDTKIVIGKDEKGEA 206