BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5229.p (162 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777423.1| stringent starvation B protein [Herbaspirill... 252 1e-65 ref|YP_001101278.1| stringent starvation protein B [Herminiimona... 211 3e-53 ref|YP_004751322.1| stringent starvation protein B [Collimonas f... 191 2e-47 ref|YP_001354957.1| stringent starvation protein B [Janthinobact... 188 2e-46 ref|ZP_08273726.1| ClpXP protease specificity-enhancing factor /... 179 1e-43 >ref|YP_003777423.1| stringent starvation B protein [Herbaspirillum seropedicae SmR1] gb|ADJ65515.1| stringent starvation B protein [Herbaspirillum seropedicae SmR1] Length = 165 Score = 252 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 150/165 (90%), Positives = 154/165 (93%), Gaps = 3/165 (1%) Query: 1 MPEVSTKPYLLRAIYEWCTDNGYTPHIAVVVDSSTRVPMQFVKNGEIVLNISFEATSGLK 60 M EVSTKPYLLRAIYEWCTDNGYTPHIAVVVDS TRVPMQFVKNGEIVLNISFEATSGLK Sbjct: 1 MQEVSTKPYLLRAIYEWCTDNGYTPHIAVVVDSRTRVPMQFVKNGEIVLNISFEATSGLK 60 Query: 61 MENDNIHFSARFGGVSRDILIPVENVIAIYARENGQGMAFEAPAPATADEVQPA---PEQ 117 MENDNIHFSARFGGVSRDILIPVENVIAIYARENGQGMAFEAPAPATA+ VQ + E Sbjct: 61 MENDNIHFSARFGGVSRDILIPVENVIAIYARENGQGMAFEAPAPATAEAVQESDAPQEP 120 Query: 118 ESSAPVLSSVPVSEPEKKPAESSDKGDDDPEPPKKGGRPVLTRIK 162 ESSAPVLSSVPVSEPEKK A+S +KGDDDPEPPKKGGRPVLTRIK Sbjct: 121 ESSAPVLSSVPVSEPEKKSADSEEKGDDDPEPPKKGGRPVLTRIK 165 >ref|YP_001101278.1| stringent starvation protein B [Herminiimonas arsenicoxydans] emb|CAL63157.1| stringent starvation protein B [Herminiimonas arsenicoxydans] Length = 172 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 117/172 (68%), Positives = 132/172 (76%), Gaps = 10/172 (5%) Query: 1 MPEVSTKPYLLRAIYEWCTDNGYTPHIAVVVDSSTRVPMQFVKNGEIVLNISFEATSGLK 60 M E STKPYLLRAIYEWCTDNGYTP++A VVD+ TRVPM+FVKNGEIVLNISF ATSGLK Sbjct: 1 MSETSTKPYLLRAIYEWCTDNGYTPYMAAVVDAGTRVPMEFVKNGEIVLNISFSATSGLK 60 Query: 61 MENDNIHFSARFGGVSRDILIPVENVIAIYARENGQGMAFEAPAPAT----ADEVQ---P 113 MEND I FSARFGGVSRDI +PV+NV AIYARENGQGMAFEA T DE+ Sbjct: 61 MENDLIRFSARFGGVSRDISVPVDNVTAIYARENGQGMAFEAIDRNTDAQAVDELADDFS 120 Query: 114 APEQ---ESSAPVLSSVPVSEPEKKPAESSDKGDDDPEPPKKGGRPVLTRIK 162 A EQ SSAP+L+SVP + + +D D++P+PPKKGGRP LTRIK Sbjct: 121 ADEQGGTTSSAPMLTSVPTMHNQHGEKDGADHSDNEPDPPKKGGRPTLTRIK 172 >ref|YP_004751322.1| stringent starvation protein B [Collimonas fungivorans Ter331] gb|AEK60499.1| Stringent starvation protein B [Collimonas fungivorans Ter331] Length = 184 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 115/169 (68%), Positives = 132/169 (78%), Gaps = 7/169 (4%) Query: 1 MPEVSTKPYLLRAIYEWCTDNGYTPHIAVVVDSSTRVPMQFVKNGEIVLNISFEATSGLK 60 M E STKPYLLRAIYEWCTDNGYTP++A VD+ TRVPMQFVKNGEIVLN+SFEATSGLK Sbjct: 16 MSETSTKPYLLRAIYEWCTDNGYTPYLAARVDAHTRVPMQFVKNGEIVLNVSFEATSGLK 75 Query: 61 MENDNIHFSARFGGVSRDILIPVENVIAIYARENGQGMAFEAPAPATADEVQPAPEQESS 120 M+N+ ++FSARFGGVSR+I +PVENVIAIYARENGQGMAFE A A + + A EQE++ Sbjct: 76 MDNEFVNFSARFGGVSREISVPVENVIAIYARENGQGMAFEPSATAAETDTEAAAEQEAN 135 Query: 121 -------APVLSSVPVSEPEKKPAESSDKGDDDPEPPKKGGRPVLTRIK 162 P+LSSVP S + K S + DPEPPKKGGRP LTRIK Sbjct: 136 PEPTATVTPILSSVPSSSSDTKQNLSGTDPEKDPEPPKKGGRPTLTRIK 184 >ref|YP_001354957.1| stringent starvation protein B [Janthinobacterium sp. Marseille] gb|ABR90046.1| stringent starvation protein B [Janthinobacterium sp. Marseille] Length = 167 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 114/170 (67%), Positives = 129/170 (75%), Gaps = 11/170 (6%) Query: 1 MPEVSTKPYLLRAIYEWCTDNGYTPHIAVVVDSSTRVPMQFVKNGEIVLNISFEATSGLK 60 M E STKPYLLRAIYEWCTDNGYTP++A VVD +TRVPM+FVKNGEIVLNISF ATSGLK Sbjct: 1 MSETSTKPYLLRAIYEWCTDNGYTPYMAAVVDGATRVPMEFVKNGEIVLNISFSATSGLK 60 Query: 61 MENDNIHFSARFGGVSRDILIPVENVIAIYARENGQGMAFEA----PAPATADEVQPAPE 116 MEND I FSARFGGVSRDI +PV+NV+AIYARENGQGMAFEA DEV+ A Sbjct: 61 MENDLIRFSARFGGVSRDISVPVDNVVAIYARENGQGMAFEATNKDATEEAGDEVEDASV 120 Query: 117 QES----SAPVLSSVPVSEPEKKPAESSDKGDDDPEPPKKGGRPVLTRIK 162 +++ +AP L+SVP + D DD P+PPKKGGRP LTRIK Sbjct: 121 EDTAPAHAAPALTSVPTA---PHDKNDDDGSDDVPDPPKKGGRPTLTRIK 167 >ref|ZP_08273726.1| ClpXP protease specificity-enhancing factor / Stringent starvation protein B [Oxalobacteraceae bacterium IMCC9480] gb|EGF32804.1| ClpXP protease specificity-enhancing factor / Stringent starvation protein B [Oxalobacteraceae bacterium IMCC9480] Length = 151 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 95/138 (68%), Positives = 110/138 (79%), Gaps = 10/138 (7%) Query: 1 MPEVSTKPYLLRAIYEWCTDNGYTPHIAVVVDSSTRVPMQFVKNGEIVLNISFEATSGLK 60 M E STKPYLLRAIYEWCTDNGYTP++AV+VD+ST+VPMQFVKNGEIVLNISF+ATS LK Sbjct: 1 MSESSTKPYLLRAIYEWCTDNGYTPYLAVLVDASTKVPMQFVKNGEIVLNISFDATSALK 60 Query: 61 MENDNIHFSARFGGVSRDILIPVENVIAIYARENGQGMAFEAPA-PATADEV-------- 111 M+ND + FSARFGGVSRDI +PVENVIAIYARENGQGMAFE PA ++ Sbjct: 61 MDNDLVRFSARFGGVSRDISVPVENVIAIYARENGQGMAFEVSRLPARDNDAVIESGDSQ 120 Query: 112 -QPAPEQESSAPVLSSVP 128 +P + S+ P L+SVP Sbjct: 121 DEPVTDPVSTGPTLTSVP 138