BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5226.p (334 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774889.1| hypothetical protein Hsero_1465 [Herbaspiril... 462 e-128 ref|ZP_06493029.1| hypothetical protein PsyrpsF_02786 [Pseudomon... 207 3e-51 ref|ZP_06458197.1| hypothetical protein PsyrpaN_08937 [Pseudomon... 206 4e-51 gb|EGH55136.1| hypothetical protein PSYCIT7_26670 [Pseudomonas s... 206 4e-51 ref|ZP_06479255.1| hypothetical protein Psyrpa2_09197 [Pseudomon... 206 5e-51 >ref|YP_003774889.1| hypothetical protein Hsero_1465 [Herbaspirillum seropedicae SmR1] gb|ADJ62981.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 334 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 229/334 (68%), Positives = 261/334 (78%) Query: 1 MGASDKVQSQTNMTENSKKELKCDCNLMWSMIQEMSTKRLCKLHGRNEGSIIPVYSDRAR 60 MGA DKV+SQTN TE S KELKCDCNLMWSMIQ+MSTKRLC LHGRNEGSIIPV+SDRAR Sbjct: 1 MGAPDKVESQTNTTEKSCKELKCDCNLMWSMIQQMSTKRLCTLHGRNEGSIIPVFSDRAR 60 Query: 61 RIAATYARFYLEKEDYGDPAKKGRFYWMALGAFASKTVACSLDDIRVATIDTVFKGLAKG 120 RI+ATYARFYLEKEDYG+P KKGRFYWMALGAFASKTVACSLDD+RV ID VFKGLAKG Sbjct: 61 RISATYARFYLEKEDYGEPTKKGRFYWMALGAFASKTVACSLDDLRVPIIDPVFKGLAKG 120 Query: 121 NLWLFYDISGWHWYYTRFGTSFDLCISQRDASAYITAVKEQVTNYPWKDEALSKINNMRT 180 NLWLFYDISGWHWYYTRF SFD C+S RDASAYI VK+QV NYPW DEAL KI NM Sbjct: 121 NLWLFYDISGWHWYYTRFRNSFDQCVSCRDASAYIKPVKDQVANYPWMDEALPKIANMHR 180 Query: 181 FDKIQAGFALVKQIEEESDRVERRKLQWDHLIKIAEHEQYVILQPLIYADKDFSDWVAVQ 240 D I F LVKQIE ++ +L++ HLI IA HEQ VILQPLIY D F+ WV VQ Sbjct: 181 HDHIVEAFDLVKQIESSRPGEDQERLKYQHLIAIANHEQGVILQPLIYDDACFARWVWVQ 240 Query: 241 RWRLVNLVSPELRLAFTSACDSKQPLKKSVAPKGTILEDYKSRMDWITQAADRFHQLMGQ 300 R R + +SP+L++AFTSACD KS APK T+LED++SRM WIT AD FH LM + Sbjct: 241 RLRGIRSLSPKLQMAFTSACDIDDQKLKSEAPKETVLEDFQSRMQWITSVADIFHDLMQR 300 Query: 301 ERAYMEQELSTIAGWVHMDESLDLENRPMMLPPI 334 + AYME +L+ +AGWV+MD+ + + M P+ Sbjct: 301 QGAYMESQLNAMAGWVNMDQMQNYQPTYMFGAPL 334 >ref|ZP_06493029.1| hypothetical protein PsyrpsF_02786 [Pseudomonas syringae pv. syringae FF5] ref|ZP_07266280.1| hypothetical protein Psyrps6_24810 [Pseudomonas syringae pv. syringae 642] Length = 330 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 120/316 (37%), Positives = 168/316 (53%), Gaps = 20/316 (6%) Query: 17 SKKELKCDCNLMWSMIQEMSTKRLC-------KLHGRNEGSIIPVYSDRARRIAATYARF 69 S +L C MW++ Q+++ +RLC K R E ++ +S RA RIA YAR Sbjct: 13 SINDLNPGCVEMWTLGQQVAIRRLCVKTRAEYKQPARYE--LLKDFSTRAARIAGNYARI 70 Query: 70 YLEKEDYGDPAKKGRFYWMALGAFASKTVACSLD-----DIR-----VATIDTVFKGLAK 119 YLE+E G P +KGRFYW L AFASK V C+LD +R V ++ L K Sbjct: 71 YLEQEHNGQPEQKGRFYWTGLAAFASKQVMCALDYSSNTKMRYLPPAVPPLEITKIFLGK 130 Query: 120 GNLWLFYDISGWHWYYTRFGTSFDLCISQRDASAYITAVKEQVTNYPWKDEALSKINNMR 179 GN WLF DI WHW+Y + F+ CI RD S Y K+ PW D+AL KINN++ Sbjct: 131 GNFWLFQDIFVWHWFYINYPQQFNECIKTRDFSTYDPRFKQSFAQLPWIDDALPKINNLK 190 Query: 180 TFDKIQAGFALVKQIEEESDRVERRKLQWDHLIKIAEHEQYVILQPLIYADKDFSDWVAV 239 D + +GF L+ +E+E R K ++ L+ IA+HEQ +ILQPLIY DK F + + Sbjct: 191 VTDYLVSGFKLISAVEKEPAGTLREKYKFQSLLAIAKHEQLMILQPLIYEDKSFRALLYM 250 Query: 240 QRWRLVNLVSPELRLAFTSACDSKQPLKKSVAPKGTILEDYKSRMDWITQAADRFHQLMG 299 Q W P + + CD+ P + + G L D + RM +IT A +H+ M Sbjct: 251 QTWVEGYGDVPRRLASLSVECDTGDPEQDVIMSDGE-LYDAEDRMIFITTIASTYHRRMQ 309 Query: 300 QERAYMEQELSTIAGW 315 ++ ME+ + TI W Sbjct: 310 RKNVEMEKAIVTIGTW 325 >ref|ZP_06458197.1| hypothetical protein PsyrpaN_08937 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gb|EGH05173.1| hypothetical protein PSYAE_25062 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 330 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 121/318 (38%), Positives = 167/318 (52%), Gaps = 24/318 (7%) Query: 17 SKKELKCDCNLMWSMIQEMSTKRLC-------KLHGRNEGSIIPVYSDRARRIAATYARF 69 S +L C MW++ Q+++ +RLC K R E ++ +S RA RIA YAR Sbjct: 13 SINDLNPGCVEMWTLGQQVAIRRLCVKTRAEYKQPARYE--LLKDFSTRAARIAGNYARI 70 Query: 70 YLEKEDYGDPAKKGRFYWMALGAFASKTVACSLDDIRVAT------------IDTVFKGL 117 YLE+E G P +KGRFYW L AFASK V C+LD A I +F L Sbjct: 71 YLEQEHNGQPEQKGRFYWTGLAAFASKQVMCALDYSSNAKMRYLPPAVPPLEITKIF--L 128 Query: 118 AKGNLWLFYDISGWHWYYTRFGTSFDLCISQRDASAYITAVKEQVTNYPWKDEALSKINN 177 KGN WLF DI WHW+Y + F+ CI RD S Y K+ PW D+AL KINN Sbjct: 129 GKGNFWLFQDIFVWHWFYINYPQQFNECIKTRDFSTYDPRFKQSFAQLPWIDDALPKINN 188 Query: 178 MRTFDKIQAGFALVKQIEEESDRVERRKLQWDHLIKIAEHEQYVILQPLIYADKDFSDWV 237 ++ D + +GF L+ +E+E R K ++ L+ IA+HEQ +ILQPLIY DK F + Sbjct: 189 LKVTDYLVSGFKLISAVEKEPAGTLREKYKFQSLLAIAKHEQLMILQPLIYEDKSFRALL 248 Query: 238 AVQRWRLVNLVSPELRLAFTSACDSKQPLKKSVAPKGTILEDYKSRMDWITQAADRFHQL 297 +Q W P + + CD+ P + + G L D + RM +IT A +H+ Sbjct: 249 YMQTWVEGYGDVPRRLASLSVECDTGDPEQDVIMSDGE-LYDAEDRMIFITTIASTYHRR 307 Query: 298 MGQERAYMEQELSTIAGW 315 M ++ ME+ + TI W Sbjct: 308 MQRKNVEMEKAIMTIGTW 325 >gb|EGH55136.1| hypothetical protein PSYCIT7_26670 [Pseudomonas syringae Cit 7] gb|EGH87171.1| hypothetical protein PLA107_28875 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 330 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 120/316 (37%), Positives = 168/316 (53%), Gaps = 20/316 (6%) Query: 17 SKKELKCDCNLMWSMIQEMSTKRLC-------KLHGRNEGSIIPVYSDRARRIAATYARF 69 S +L C MW++ Q+++ +RLC K R E ++ +S RA RIA YAR Sbjct: 13 SINDLNPGCVEMWTLGQQVAIRRLCVKTRAEYKQPARYE--LLKDFSTRAARIAGNYARI 70 Query: 70 YLEKEDYGDPAKKGRFYWMALGAFASKTVACSLD-----DIR-----VATIDTVFKGLAK 119 YLE+E G P +KGRFYW L AFASK V C+LD +R V ++ L K Sbjct: 71 YLEQEHNGQPEQKGRFYWTGLAAFASKQVMCALDYSSNTKMRYLPPAVPPLEITKIFLGK 130 Query: 120 GNLWLFYDISGWHWYYTRFGTSFDLCISQRDASAYITAVKEQVTNYPWKDEALSKINNMR 179 GN WLF DI WHW+Y + F+ CI RD S Y K+ PW D+AL KINN++ Sbjct: 131 GNFWLFQDIFVWHWFYINYPQQFNECIKTRDFSTYDPRFKQSFAQLPWIDDALPKINNLK 190 Query: 180 TFDKIQAGFALVKQIEEESDRVERRKLQWDHLIKIAEHEQYVILQPLIYADKDFSDWVAV 239 D + +GF L+ +E+E R K ++ L+ IA+HEQ +ILQPLIY DK F + + Sbjct: 191 VTDYLVSGFKLISAVEKEPAGTLREKYKFQSLLAIAKHEQLMILQPLIYEDKSFRALLYM 250 Query: 240 QRWRLVNLVSPELRLAFTSACDSKQPLKKSVAPKGTILEDYKSRMDWITQAADRFHQLMG 299 Q W P + + CD+ P + + G L D + RM +IT A +H+ M Sbjct: 251 QTWVEGYGDVPRRLASLSVECDTGDPEQDVIMSDGE-LYDAEDRMIFITTIASTYHRRMQ 309 Query: 300 QERAYMEQELSTIAGW 315 ++ ME+ + TI W Sbjct: 310 RKNVEMEKAIMTIGTW 325 >ref|ZP_06479255.1| hypothetical protein Psyrpa2_09197 [Pseudomonas syringae pv. aesculi str. 2250] Length = 330 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 121/318 (38%), Positives = 167/318 (52%), Gaps = 24/318 (7%) Query: 17 SKKELKCDCNLMWSMIQEMSTKRLC-------KLHGRNEGSIIPVYSDRARRIAATYARF 69 S +L C MW++ Q+++ +RLC K R E ++ +S RA RIA YAR Sbjct: 13 SINDLNPGCVEMWTLGQQVAIRRLCVKTRAEYKQPARYE--LLKDFSTRAARIAGNYARI 70 Query: 70 YLEKEDYGDPAKKGRFYWMALGAFASKTVACSLDDIRVAT------------IDTVFKGL 117 YLE+E G P +KGRFYW L AFASK V C+LD A I +F L Sbjct: 71 YLEQEHNGQPEQKGRFYWTGLAAFASKQVMCALDYSSNAKMRYLPPAVPPLEITKIF--L 128 Query: 118 AKGNLWLFYDISGWHWYYTRFGTSFDLCISQRDASAYITAVKEQVTNYPWKDEALSKINN 177 KGN WLF DI WHW+Y + F+ CI RD S Y K+ PW D+AL KINN Sbjct: 129 GKGNFWLFQDIFVWHWFYINYPQQFNECIKTRDFSTYDPRFKQSFAQLPWIDDALPKINN 188 Query: 178 MRTFDKIQAGFALVKQIEEESDRVERRKLQWDHLIKIAEHEQYVILQPLIYADKDFSDWV 237 ++ D + +GF L+ +E+E R K ++ L+ IA+HEQ +ILQPLIY DK F + Sbjct: 189 LKVTDYLVSGFKLISAVEKEPAGTLREKYKFQSLLAIAKHEQLMILQPLIYEDKSFRALL 248 Query: 238 AVQRWRLVNLVSPELRLAFTSACDSKQPLKKSVAPKGTILEDYKSRMDWITQAADRFHQL 297 +Q W P + + CD+ P + + G L D + RM +IT A +H+ Sbjct: 249 YMQTWVEGYGDVPRRLASLSVECDTGDPEQDVIMSDGE-LYDAEDRMIFITTIASTYHRR 307 Query: 298 MGQERAYMEQELSTIAGW 315 M ++ ME+ + TI W Sbjct: 308 MQRKNVDMEKAIMTIGTW 325