BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5225.p (959 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774163.1| VGR-related protein [Herbaspirillum seropedi... 1458 0.0 ref|YP_285391.1| Rhs element Vgr protein [Dechloromonas aromatic... 820 0.0 ref|YP_003981712.1| Rhs element Vgr family protein 2 [Achromobac... 673 0.0 ref|YP_452328.1| putative VGR-related protein [Xanthomonas oryza... 647 0.0 ref|NP_522299.1| putative VGR-related protein [Ralstonia solanac... 646 0.0 >ref|YP_003774163.1| VGR-related protein [Herbaspirillum seropedicae SmR1] gb|ADJ62255.1| VGR-related protein [Herbaspirillum seropedicae SmR1] Length = 954 Score = 1458 bits (3774), Expect = 0.0, Method: Composition-based stats. Identities = 786/960 (81%), Positives = 867/960 (90%), Gaps = 7/960 (0%) Query: 1 MNLPFPDSLSSVINQLFGPGLSQHARLITLASAQEAGLPESLVVERFHGQESVNDNFQFE 60 MNLP PDSL++ + +LFG GLSQ+ARLIT+ +AQ AGLPE+L VERF G+ESVNDNF+F+ Sbjct: 1 MNLPLPDSLTAAVTELFGTGLSQNARLITMTTAQSAGLPETLAVERFEGEESVNDNFRFD 60 Query: 61 IDALSVSTDLDLKQFIGTELTLRLLQADGSRRAWHGYCTQASWLGADGGLARYRLRLESF 120 IDALS+STDLDLKQFIG E++LRLLQADG RAWHGYCTQASWLGADGGLARYRLRLESF Sbjct: 61 IDALSISTDLDLKQFIGAEISLRLLQADGGTRAWHGYCTQASWLGADGGLARYRLRLESF 120 Query: 121 LAFLDRRRDSFLFQDMSVTDIASAVLKEYPQANFALDVTQTLTKRDICTQYRESDFAFLR 180 LAFLDRR DSFLFQDM+VTDIA+AVLKEYPQANF+L+VTQTL KRDICTQYRE+D+AFLR Sbjct: 121 LAFLDRRHDSFLFQDMTVTDIAAAVLKEYPQANFSLEVTQTLAKRDICTQYRETDYAFLR 180 Query: 181 RILASEGLNFRFEHQQE-GEQGQASGQQQARHKLVIFDREAKAPDLPGGDTRIRFHRIAA 239 RILASEGLNFRFEH+Q+ Q Q ARHKLVIFDR AKAP LPGGD IRFHR+AA Sbjct: 181 RILASEGLNFRFEHEQDDATQQHDQSQPHARHKLVIFDRNAKAPALPGGDEYIRFHRVAA 240 Query: 240 TEASDAITDFSAVRSVRSNAVALASWHPEKISSPSAEENSSLDAGEVPALAVYDGTGQQD 299 EASDAITDF+AVRSVR N VALASWHPEK+SSPS EE S+LDAGE+P+L VYDGTGQQD Sbjct: 241 MEASDAITDFAAVRSVRPNGVALASWHPEKLSSPSHEEGSTLDAGELPSLPVYDGTGQQD 300 Query: 300 FADQEAAATHAQLMLQALEMQNKRFEGAGAARQLSAGTQFTLSQHERHPEGENRFKLLSV 359 FADQ+AAA HAQLMLQALEMQNKRFEGAGAARQL+AG +FTL QHER+PEGEN FK++SV Sbjct: 301 FADQDAAAAHAQLMLQALEMQNKRFEGAGAARQLAAGARFTLLQHERYPEGENAFKVVSV 360 Query: 360 RHSARNNFDSNITQILEQFIPASLANLFGKTPSSGGLSDDDLKAGTYRNSFVAVREVVPI 419 RH+ARNN +NIT+IL PA+ A LFG S+ DDDL+AGTYRNSF A+R+ VP+ Sbjct: 361 RHAARNNVSANITRILA---PAAGA-LFGG--SAAAERDDDLQAGTYRNSFTAIRDSVPM 414 Query: 420 VPAAITERLKPTARGTQTALVTGLPDAAVTTDRNHRVKVQFHWQRGKSPNPGGLRETGNL 479 VPAAI ERLKPTARGTQTALVTG DAAVTTDRNHRVKVQFHWQRGKSPNPGGLRETGNL Sbjct: 415 VPAAIAERLKPTARGTQTALVTGAADAAVTTDRNHRVKVQFHWQRGKSPNPGGLRETGNL 474 Query: 480 DDKDGNAPGNDASGTWVRVAEAQSGPNWGSQFTPRIGSEVLIDFIEGDIDRPVVVAQLYN 539 DDKDGNA GND+SGTW+RVAEAQSGPNWGSQF PR+GSEVL+DFIEGDIDRPVVVAQLYN Sbjct: 475 DDKDGNANGNDSSGTWIRVAEAQSGPNWGSQFIPRVGSEVLVDFIEGDIDRPVVVAQLYN 534 Query: 540 GNDVPPFPAGAESDANHAGTISGWHSTAHDGSGFNQWVVDDTQSQLRMRLASSQGKSELN 599 G+D PPFPAGA+S NHAG+ISGWHSTAHDGSGFNQWVVDDTQSQLRMRLASS KS+LN Sbjct: 535 GSDAPPFPAGADSGINHAGSISGWHSTAHDGSGFNQWVVDDTQSQLRMRLASSTAKSQLN 594 Query: 600 LGHLIDQADTGAQRGSYRGQGFELRTDAWGVVRGAEGLLISSTARPVAGASVTSTQMDAH 659 LGHL++QADTGAQRGSYRGQGFELR+DAWGVVRG EGLL+S+TARP+ GASVT TQMDA Sbjct: 595 LGHLVEQADTGAQRGSYRGQGFELRSDAWGVVRGGEGLLLSTTARPLNGASVTGTQMDAA 654 Query: 660 EAVAQLKGAQQLAQTMGEAATQQQALHSADALQAKTDFISVIDPQDQGKHPASVNGQDAF 719 A+AQLKGA+ LAQTM ++ATQQQAL S ALQAKTDF+++IDP DQGKHPASVNGQDA Sbjct: 655 GAIAQLKGAKSLAQTMSDSATQQQALSSTQALQAKTDFLALIDPSDQGKHPASVNGQDAL 714 Query: 720 KSQAGSRESDSSQPVEKFSKAAVLMESPSNVNWASAASTVLYAGANLHWTTQGDTHWTAA 779 KS +R +D++QPVEKF+KAAVLM+SPS++NW S AST+LYA NL WTTQGD HW+AA Sbjct: 715 KSDGSTRNTDAAQPVEKFAKAAVLMDSPSSINWTSNASTLLYAAENLQWTTQGDVHWSAA 774 Query: 780 DTASLAAGKAATLFAHDGGIQAFAGNGPVSLQAHTDALEILADKDVSVISVNEGIEIKAR 839 DTAS AAGKAA+ ++HDGGIQAFA NGPVSLQAHTDALEILADKDV+V SVN+ IEIKAR Sbjct: 775 DTASAAAGKAASFYSHDGGIQAFAANGPVSLQAHTDALEILADKDVTVTSVNDSIEIKAR 834 Query: 840 QKIVLQAGQASVTLEGGNITFACPGTFSVKGATHAFPGGASVSPDLMALPDTKYKLFDEA 899 QKIVLQAGQASVTLEGGNITFACPGTFSVKGATHAFPGGASVSPDLMALPDTKYKLFDEA Sbjct: 835 QKIVLQAGQASVTLEGGNITFACPGTFSVKGATHAFPGGASVSPDLMALPDTKYKLFDEA 894 Query: 900 FVVKDPNGTPLSDIPYRIKSSAGDQLAATAKDGMSERVGTEASEHVEFAMEWFKVVPAKS 959 FVVKDPNGTPLSDIPYRIKSSAGDQLA TAKDGMSERV TEASE+VEFAMEWFKVVPAK+ Sbjct: 895 FVVKDPNGTPLSDIPYRIKSSAGDQLATTAKDGMSERVSTEASENVEFAMEWFKVVPAKT 954 >ref|YP_285391.1| Rhs element Vgr protein [Dechloromonas aromatica RCB] gb|AAZ46921.1| Rhs element Vgr protein [Dechloromonas aromatica RCB] Length = 911 Score = 820 bits (2119), Expect = 0.0, Method: Composition-based stats. Identities = 470/950 (49%), Positives = 628/950 (66%), Gaps = 49/950 (5%) Query: 16 LFGPGLSQHARLITLASAQEAGLPES-LVVERFHGQESVNDNFQFEIDALSVSTDLDLKQ 74 L P +QHARL+ L +A LP++ L+VERF+G+E+++++F+FEID +S + DLK Sbjct: 5 LLDPLFNQHARLLELKTA----LPDAALIVERFNGREAISESFRFEIDCVSTNAYFDLKP 60 Query: 75 FIGTELTLRLLQADGSRRAWHGYCTQASWLGADGGLARYRLRLESFLAFLDRRRDSFLFQ 134 IG E+TLRLLQADGS+R+WHGY TQA LGADGGLARYRL +E FLAFL +RRD +LFQ Sbjct: 61 LIGEEITLRLLQADGSKRSWHGYVTQAMQLGADGGLARYRLIMEPFLAFLAQRRDCYLFQ 120 Query: 135 DMSVTDIASAVLKEYPQANFALDVTQTLTKRDICTQYRESDFAFLRRILASEGLNFRFEH 194 D +V DI +L +YP+A+++ VTQ+L + TQYRE+DF F+ R+L+ EGL+FRFEH Sbjct: 121 DKTVIDIIGQILADYPEAHWSNQVTQSLRSHSVATQYRETDFEFIHRLLSEEGLSFRFEH 180 Query: 195 QQEGEQGQASGQQQARHKLVIFDREAKAPDLPGGDTRIRFHRIAATEASDAITDFSAVRS 254 Q G + ARH+L++FDRE + PD G IRFHR ATEASD + + +R+ Sbjct: 181 DQSAAAGDDA--THARHQLIVFDRETELPD--GVQPTIRFHRNNATEASDTLQQWHEIRT 236 Query: 255 VRSNAVALASWHPEKISSPSAEENSSLDAGEVPALAVYDGTGQQDFADQEAAATHAQLML 314 NAV+LA W + + + A+ SS D G +P L ++D + F D AA L L Sbjct: 237 ALPNAVSLAGWDYKTLVATGAQAQSSHDNGALPRLEIHDASRPYRFEDSAAAQLRTDLAL 296 Query: 315 QALEMQNKRFEGAGAARQLSAGTQFTLSQHERHPEGENRFKLLSVRHSARNNFDSNITQI 374 A+E +RF G + RQL+ GT TL+QHE + E+RFK+LSV H NN Sbjct: 297 AAIEANYRRFAGESSVRQLAEGTVITLTQHEAYVSDESRFKVLSVDHHGANN-------- 348 Query: 375 LEQFIPASLANLFGKTPSSGGLSDDDLKAGTYRNSFVAVREVVPIVPAAITERLKPTARG 434 + AS A L G T +++AG+YRN+ A +P+V A + KP A Sbjct: 349 ----LGASAAELLGST---------EVEAGSYRNTLNAQPASIPVVSALLA---KPAAH- 391 Query: 435 TQTALVTGLPDAAVTTDRNHRVKVQFHWQRGKSPNPGGLRET---GNLDDKDGNAPGNDA 491 QTALV GL D +TT+R+HR+K+QFHWQRG++PN GG+ T G K GNAPGND Sbjct: 392 PQTALVVGLSDQVITTERDHRIKIQFHWQRGEAPNTGGISATGPNGRSAGKTGNAPGNDQ 451 Query: 492 SGTWVRVAEAQSGPNWGSQFTPRIGSEVLIDFIEGDIDRPVVVAQLYNGNDVPPFPAGAE 551 SGTWVRVAE SGPNWGS F PRIG+EVL+DF++GDIDRPV+V Q YNG D+PPF AG E Sbjct: 452 SGTWVRVAEWLSGPNWGSHFLPRIGNEVLVDFLDGDIDRPVIVGQSYNGADLPPFSAGHE 511 Query: 552 SDANHAGTISGWHSTAHDGSGFNQWVVDDTQSQLRMRLASSQGKSELNLGHLIDQADTGA 611 ++ANH G +SGW S H+ G NQWVVDD QLR RLA+S+ +L LGHL+ QA A Sbjct: 512 ANANHPGVLSGWMSHNHE-EGHNQWVVDDAPGQLRTRLATSENAGQLGLGHLVHQAPESA 570 Query: 612 QRGSYRGQGFELRTDAWGVVRGAEGLLISSTARPVAGASVTSTQMDAHEAVAQLKGAQQL 671 RG++RG GFELRTD W VR EG+LIS+TARP A STQMD E VAQLK A++ Sbjct: 571 SRGAWRGSGFELRTDGWLAVRAGEGILISATARPNA----QSTQMDVAETVAQLKVAEET 626 Query: 672 AQTMGEAATQQQALHSADALQAKTDFISVIDPQDQGKHPASVNGQDAFKSQAGSRESDSS 731 A+ + +AA+QQQAL A A+T FI IDP+ QGK SV GQ A K+Q GSRE Sbjct: 627 AKALSDAASQQQAL-PLKANAAQTKFIEGIDPKQQGKFSGSVGGQAAQKAQPGSRE--LG 683 Query: 732 QPVEKFSKAAVLMESPSNVNWASAASTVLYAGANLHWTTQGDTHWTAADTASLAAGKAAT 791 P E++++ +L E+P ++ AS AST+L+AGANLH T Q D H +A T S A G+ A+ Sbjct: 684 DPTERYAEPFILAEAPGDIGLASPASTLLFAGANLHVTAQQDMHIASAYTVSTAVGQGAS 743 Query: 792 LFAHDGGIQAFAGNGPVSLQAHTDALEILADKDVSVISVNEGIEIKARQKIVLQAGQASV 851 F+H GGI++FA G ++QA+TD LEILAD+ ++V S N+ I I A+ KIVLQAGQ+SV Sbjct: 744 WFSHAGGIKSFAQAGTHTIQANTDQLEILADQSLTVTSTNDEIHILAKDKIVLQAGQSSV 803 Query: 852 TLEGGNITFACPGTFSVKGATHAFPGGASVSPDLMALPDTKYKLFDEAF-VVKDPNGTPL 910 TLEGGNITFACPG FSVKG+ +AF G S + LPD++ K+FDE + G P+ Sbjct: 804 TLEGGNITFACPGNFSVKGSGNAFMGPGSDPAQVEGLPDSRAKVFDEQIRALHSETGQPI 863 Query: 911 SDIPYRIKSSAGDQLAA-TAKDGMSERVGTEASEHVEFAMEWFKVVPAKS 959 +++PY++ + G+ T ++G + R+G+ V+ + W ++ P+++ Sbjct: 864 AEMPYKMVTGDGEVFYGFTDQEGKTMRIGSAEPSTVK--VYWGEMPPSET 911 >ref|YP_003981712.1| Rhs element Vgr family protein 2 [Achromobacter xylosoxidans A8] gb|ADP18997.1| Rhs element Vgr family protein 2 [Achromobacter xylosoxidans A8] Length = 1733 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 403/883 (45%), Positives = 550/883 (62%), Gaps = 51/883 (5%) Query: 20 GLSQHARLITLASAQEAGLPESLVVERFHGQESVNDNFQFEIDALSVSTDLDLKQFIGTE 79 LSQ+AR++ + + +A +L VER +E V++ F +D L+ S +LD++ +G E Sbjct: 18 ALSQNARMLQVRTPLDA----ALAVERMSLREGVSELFALTLDCLASSAELDVQALLGRE 73 Query: 80 LTLRLLQADGSRRAWHGYCTQASWLGADGGLARYRLRLESFLAFLDRRRDSFLFQDMSVT 139 +++ +L ADG RR WH LGADGGLARYRL +LA L RRDSFLFQD SVT Sbjct: 74 ISVSVLLADGGRRQWHAVVEGVDALGADGGLARYRLHAAPWLAALGLRRDSFLFQDKSVT 133 Query: 140 DIASAVLKEYPQANFALDVTQTLTKRDICTQYRESDFAFLRRILASEGLNFRFEHQQEGE 199 DI + + +YPQA ++ D+ + R + TQYRE+D AF+ R+LA GL+FRF+HQQ + Sbjct: 134 DILTEIFADYPQAAYSFDIAEPPAPRPLRTQYRETDLAFVLRLLAETGLSFRFDHQQGEQ 193 Query: 200 QGQASGQQQARHKLVIFDREAKAPDLPGGDTRIRFHRIAATEASDAITDFSAVRSVRSNA 259 Q ASG ARH+LV+FD A P P D +RFHR ATE D+IT F R+V+SNA Sbjct: 194 QDDASGG--ARHRLVVFDTRAARPACP--DATLRFHRSDATETEDSITRFGGARAVQSNA 249 Query: 260 VALASWHPEKISSPSAEENSSLDAGEVPALAVYDGTGQQDFADQEAAATHAQLMLQALEM 319 V +W K+ + +A S + AG VP L YD G +AD + A A LQA E Sbjct: 250 VTRLAWDDRKLLAHAAHAQSDVPAGAVPRLEDYDYDGHGRYADSDGAELAAARSLQAHEA 309 Query: 320 QNKRFEGAGAARQLSAGTQFTLSQHERHPEGE---------NRFKLLSVRHSARNNFDSN 370 + RF+G G ARQ+ G FTL+QH R+ G NR+ LL V H A NN S Sbjct: 310 RMVRFDGGGTARQMMPGHDFTLTQHSRYAAGSGQAVDEMGGNRYTLLHVEHEAANNLGSQ 369 Query: 371 ITQILEQFIPASLANLFGKTPSSGGLSDDDLKAGTYRNSFVAVREVVPIVPAAITERLKP 430 ++ L + DL+ G+YRNSF A+ P A R KP Sbjct: 370 ---------------------AARALGESDLEHGSYRNSFSALPAAAP---LAPGWRAKP 405 Query: 431 TARGTQTALVTGLPDAAVTTDRNHRVKVQFHWQRGKSPNPGGLRETGNLDDKDGNAPGND 490 TA TA+V DA +++ R+ R+KVQF WQRG P PGGL + DD GNAPG+D Sbjct: 406 TAPEGLTAVVMAAQDAPISSGRDLRIKVQFPWQRGARPLPGGLAHRSHGDDT-GNAPGDD 464 Query: 491 ASGTWVRVAEAQSGPNWGSQFTPRIGSEVLIDFIEGDIDRPVVVAQLYNGNDVPPFPAGA 550 +SGTW+RVA AQ+GPNWG+ PR G+EVL++F++GDID+PV AQLYN D+PP+ AG Sbjct: 465 SSGTWLRVAGAQAGPNWGAHHLPRKGTEVLVEFLDGDIDQPVASAQLYNDADLPPWSAGE 524 Query: 551 ESDANHAGTISGWHSTAHDGSGFNQWVVDDTQSQLRMRLASSQGKSELNLGHLIDQADTG 610 ++ ANH GT+SGWHS D +G +QW+ DDT Q+R RL+SS G ++L LG+L+DQA Sbjct: 525 DAAANHPGTLSGWHSKGLDDAGHSQWLFDDTTRQMRTRLSSSIGATQLGLGYLVDQAADE 584 Query: 611 AQRGSYRGQGFELRTDAWGVVRGAEGLLISSTARPVAGASVTSTQMDAHEAVAQLKGAQQ 670 + RG++RG GFELR+DAW VVR +G+L+S++AR A STQ DA EA+ +L+GAQ Sbjct: 585 SNRGAWRGTGFELRSDAWTVVRSGQGMLVSASAREDA----RSTQADAQEALTRLRGAQH 640 Query: 671 LAQTMGEAATQQQALHSADALQAKTDFIS-VIDPQDQGKHPASVNGQDAFKSQAGSRESD 729 AQ + A T++QA A A ++ D ++ IDP+ G++P SV GQ A K AG E Sbjct: 641 AAQRLDAAGTKRQA--RALAATSQYDALTRAIDPKGDGRYPGSVGGQQAVK--AGGGERS 696 Query: 730 SSQPVEKFSKAAVLMESPSNVNWASAASTVLYAGANLHWTTQGDTHWTAADTASLAAGKA 789 ++ VE+ A +L+++PS++N+A+ AS +L+AG NLH T D H A T + A+G++ Sbjct: 697 GTEAVERIDGARMLIDAPSSLNFATPASAILHAGENLHVTALADGHVAARQTFATASGRS 756 Query: 790 ATLFAHDGGIQAFAGNGPVSLQAHTDALEILADKDVSVISVNEGIEIKARQKIVLQAGQA 849 +LF DGGI+A A PVS+ AHTD LE+LA +D++V S ++ IEI A + I LQA A Sbjct: 757 TSLFVQDGGIRAVAAESPVSIHAHTDMLEMLAGQDITVTSTSDSIEILANKSITLQAAGA 816 Query: 850 SVTLEGGNITFACPGTFSVKGATHAFPGGASVSPDLMALPDTK 892 S+ + GG+I F PG FSVKGA+H G AS + L ALP T+ Sbjct: 817 SIVMNGGDILFKGPGMFSVKGASHNLIGPASDAAALPALPSTQ 859 >ref|YP_452328.1| putative VGR-related protein [Xanthomonas oryzae pv. oryzae MAFF 311018] dbj|BAE70054.1| putative VGR-related protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 905 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 409/922 (44%), Positives = 540/922 (58%), Gaps = 58/922 (6%) Query: 22 SQHARLITLASAQEAGLPESLVVERFHGQESVNDNFQFEIDALSVSTDLDLKQFIGTELT 81 SQHARLI L + E LVVERFHGQE+V +I L+ S LD + + L Sbjct: 17 SQHARLIQLRAPVEG-----LVVERFHGQEAVCGATVLQIACLATSAFLDAEALLEQPLD 71 Query: 82 LRLLQADGSRRAWHGYCTQASWLGADGGLARYRLRLESFLAFLDRRRDSFLFQDMSVTDI 141 L+L QADG++R W G CT+ + LG DGGLARYRL L + A L+ RR++ +FQD+ I Sbjct: 72 LQLRQADGTQRHWQGLCTEVAQLGGDGGLARYRLTLAPWTALLELRRNALVFQDLDARAI 131 Query: 142 ASAVLKEYPQANFALDVTQTLTKRDICTQYRESDFAFLRRILASEGLNFRFEHQQEGEQG 201 + +YPQA F DV L I TQYRE+D+AF+ R+LA GL +R+ H Q+ + Sbjct: 132 CERIFADYPQAAFRFDVQAALPAHPITTQYRETDWAFVTRLLAEAGLAWRYAHAQDADS- 190 Query: 202 QASGQQQARHKLVIFDREAKAPDLPGGDTRIRFHRIAATEASDAITDFSAVRSVRSNAVA 261 Q LVIFD +A+ PD IRFHR EA DAI F R V A Sbjct: 191 -----QATAATLVIFDPQAQVPD----SGTIRFHRSDLAEADDAIGAFGERRGVVPTAST 241 Query: 262 LASWHPEKISSPSAEENSSLDAGEVPALAVYDGTGQQDFADQEAAATHAQLMLQALEMQN 321 + SWH E++ + A+ + +AG +P L VY FA + A AQ L AL + + Sbjct: 242 VTSWHSEQVRAVGAQAQA--EAGGLPPLEVYVQPRAGRFAQEATAQDQAQARLDALRVPH 299 Query: 322 KRFEGAGAARQLSAGTQFTLSQHERHPEGENRFKLLSVRHSARNNFDSNITQILEQFIPA 381 GAG+AR L+AG FTL QH +H +G+ RF +++ H A NN I +L+ Sbjct: 300 TLHAGAGSARVLAAGAAFTLRQHAQH-DGQ-RFVPVAIEHVAVNNLGQGIVALLDA---- 353 Query: 382 SLANLFGKTPSSGGLSDDDLKAGTYRNSFVAVREVVPIVPAAITERLKPTARGTQTALVT 441 +L+ G+YRN F+AV P+ + +P G Q+A V Sbjct: 354 -----------------PELEHGSYRNRFLAVPAATPL---RALPQDRPRMPGPQSARVV 393 Query: 442 GLPDAAVTTDRNHRVKVQFHWQRGKSPNPGGLRETGNLDDKDGNAPGNDASGTWVRVAEA 501 G+ DAA++ R+H+V++QF WQRG P PGGL ++ + G+APG+ +GTWV VAE Sbjct: 394 GVADAALSPSRDHQVRIQFPWQRGDQPTPGGLTDSAS--TAPGHAPGDQRAGTWVPVAEW 451 Query: 502 QSGPNWGSQFTPRIGSEVLIDFIEGDIDRPVVVAQLYNGNDVPPFPAGAESDANHAGTIS 561 +GPNWGS F PRIGSEVL++F+ GDID+P + QLYNG PPF G ++ A+H GT+S Sbjct: 452 VAGPNWGSHFLPRIGSEVLVEFLHGDIDQPRITGQLYNGEVAPPFGGGLDARASHPGTLS 511 Query: 562 GWHSTAHDGSGFNQWVVDDTQSQLRMRLASSQGKSELNLGHLIDQADTGAQRGSYRGQGF 621 G H+ +HDGSG QW++DDT QLR RL +S + L LG+L+ +DT RG+ RGQGF Sbjct: 512 GLHTQSHDGSGTQQWLLDDTPGQLRTRLHTSLADTRLELGYLVQHSDTA--RGALRGQGF 569 Query: 622 ELRTDAWGVVRGAEGLLISSTARPVAGASVTSTQMDAHEAVAQLKGAQQLAQTMGEAATQ 681 EL + WG V A+GLL+SS+AR ST +D EAVAQL GAQ+ AQ + TQ Sbjct: 570 ELASQGWGNVHAAQGLLLSSSAR----GQGASTALDVAEAVAQLHGAQRTAQALHATLTQ 625 Query: 682 QQALHSADALQAKTDFISVIDPQDQGKHPASVNGQDAFKSQAGSRESDSSQPVEKFSKAA 741 QQ + DA + T IDPQ QGK+ A+V GQ A K G R D PVE+F++A Sbjct: 626 QQ-VPGLDAHPSVTQLREAIDPQAQGKYTAAVGGQAATKPADGGR--DGQAPVERFAQAR 682 Query: 742 VLMESPSNVNWASAASTVLYAGANLHWTTQGDTHWTAADTASLAAGKAATLFAHDGGIQA 801 +L ESP ++ W + AS V YAG L T Q D +A T S +G+ LFA G I+ Sbjct: 683 LLGESPDHIAWTTPASAVAYAGQALQLTVQQDAQLSAGQTLSAVSGQHTALFAQRGPIKL 742 Query: 802 FAGNGPVSLQAHTDALEILADKDVSVISVNEGIEIKARQKIVLQAGQASVTLEGGNITFA 861 A GPVSLQAHT ALE+LAD+ V+V + + I++ A+ KIVLQAGQ +TLEGG+ITFA Sbjct: 743 IAAAGPVSLQAHTGALELLADQAVTVTATDTRIDVLAQHKIVLQAGQTRITLEGGDITFA 802 Query: 862 CPGTFSVKGATHAFPGGASVSPDLMALPDTKYKLF--DEAF-VVKDPNGTPLSDIPYRIK 918 CPG F+VK +TH F GG L ALP + F DE F +V D TPLS YRI Sbjct: 803 CPGQFTVKASTHPFLGGEMNVAPLSALPGSLISDFGYDEQFRLVADDGETPLSRCRYRIT 862 Query: 919 SSAGDQLAATA-KDGMSERVGT 939 + GD A +DG++ERV T Sbjct: 863 GNNGDAWEGIADEDGLTERVFT 884 >ref|NP_522299.1| putative VGR-related protein [Ralstonia solanacearum GMI1000] emb|CAD17889.1| putative vgr-related protein [Ralstonia solanacearum GMI1000] Length = 898 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 414/964 (42%), Positives = 569/964 (59%), Gaps = 71/964 (7%) Query: 1 MNLPFPDSLSSVINQLFGPGLSQHARLITLASAQEAGLPESLVVERFHGQESVNDNFQFE 60 M PFP ++V + G L Q R ITL +A + ++LVVERF +E+V+ + + Sbjct: 1 MKSPFPLP-AAVPQAVLGALLGQQTRQITLETALTS---DNLVVERFTAREAVSASCVLQ 56 Query: 61 IDALSVSTDLDLKQFIGTELTLRLLQADGSRRAWHGYCTQASWLGADGGLARYRLRLESF 120 +D LS +LD Q E TLRL+ ADGSRRAWHGY T + LG +GGLARYRLR+ + Sbjct: 57 VDCLSPLANLDTAQLASQEATLRLMLADGSRRAWHGYVTDCAALGGNGGLARYRLRIGPW 116 Query: 121 LAFLDRRRDSFLFQDMSVTDIASAVLKEYPQANFALDVTQTLTKRDICTQYRESDFAFLR 180 L L RRD F++QD + +I + +YP A++ L V+Q KR IC QYRE+D+ F+ Sbjct: 117 LDRLHTRRDCFVYQDKTALEIIEDLFADYPVAHYKLAVSQPCAKRSICCQYRETDYDFVM 176 Query: 181 RILASEGLNFRFEHQQEGEQGQASGQQQARHKLVIFDREAKAPDLPGGDTRIRFHRIAAT 240 R+LA EGL+ R EH+Q + G Q+RH +VIFD +A+ P D IRFHR+ AT Sbjct: 177 RLLAEEGLSLRIEHEQ--GDARRDGSAQSRHCVVIFDNDAERPACAQPD--IRFHRVDAT 232 Query: 241 EASDAITDFSAVRSVRSNAVALASWHPEKISSPSAEENSSLDAGEVPALAVYDGTGQQDF 300 E DAI FS +R+V +NAV ++SW+ + +++ +A+ ++S GE+PAL ++ G F Sbjct: 233 EREDAIERFSQMRTVGTNAVTVSSWNYKALAATAAQASASDPGGELPALEAFEAAGPYRF 292 Query: 301 ADQEAAATHAQLMLQALEMQNKRFEGAGAARQLSAGTQFTLSQH--ERHPEGENRFKLLS 358 AD + A A+L +QA E R+ G G+ RQL G +FTL+QH RH ++F LS Sbjct: 293 ADAQGAGRAARLRMQAHEGAYLRYLGQGSVRQLGPGQRFTLTQHFDTRH----SQFVTLS 348 Query: 359 VRHSARNNFDSNITQILEQFIPASLANLFGKTPSSGGLSDDDLKAGTYRNSFVAVREVVP 418 V H A NN + A LA L G T D+++G YRN FVAV P Sbjct: 349 VEHEAANN------------LGADLARLLGTT---------DIESGRYRNRFVAVPAEAP 387 Query: 419 IVPAAITERLKPTARGTQTALVTGLPDAAVTTDRNHRVKVQFHWQRGKSPNPGGLRETGN 478 IVP R +PTA Q A V A +TTDR+HRV+++F W R +P E Sbjct: 388 IVPPY---RHRPTAPEGQAATVIADDGAPLTTDRDHRVRIRFPWLR--APALNAFAEPAG 442 Query: 479 LDDKDGNAPGNDASGTWVRVAEAQSGPNWGSQFTPRIGSEVLIDFIEGDIDRPVVVAQLY 538 D A WVRVA A +GPNWG+ PR G++VL+ F++GDIDRP+V QL+ Sbjct: 443 SDRSQVTA--------WVRVATASAGPNWGAHHLPRAGTQVLLTFVDGDIDRPLVTMQLH 494 Query: 539 NGNDVPPFPAGAESDANHAGTISGWHSTAHDGSGFNQWVVDDTQSQLRMRLASSQGKSEL 598 N D P+PA +DA +SGWHS + G G+NQWVVDD +QLRMRLASS S+L Sbjct: 495 NEQDALPWPA---ADAPLGQALSGWHSPSLGGDGYNQWVVDDHPAQLRMRLASSTAGSQL 551 Query: 599 NLGHLIDQADTGAQRGSYRGQGFELRTDAWGVVRGAEGLLISSTARPVAGASVTSTQMDA 658 NLG+++ TG +RG +RG G ELRTDAW VVR GLL+S+TAR AG T +D Sbjct: 552 NLGYVVSHGPTGGERGDWRGTGAELRTDAWAVVRAGGGLLLSTTARAQAGG----TLLDM 607 Query: 659 HEAVAQLKGAQQLAQTMGEAATQQQALH-SADALQAKTDFISVIDPQDQGKHPASVNGQD 717 HEA QL AQ+ AQ + +AA QQAL SA+A A +DP G +P+SVNGQD Sbjct: 608 HEARGQLTAAQRTAQRLSDAAASQQALPLSANA--AFDPLTQALDPAQDGHYPSSVNGQD 665 Query: 718 AFKSQAGSRESDSSQPVEKFSKAAVLMESPSNVNWASAASTVLYAGANLHWTTQGDTHWT 777 A + + PV+KF++ ++ ESP+++ AS A+T +YAG +LH T QGD H Sbjct: 666 ATQP--------NRAPVDKFAQPLLVTESPASIALASQATTTVYAGRHLHGTAQGDWHLA 717 Query: 778 AADTASLAAGKAATLFAHDGGIQAFAGNGPVSLQAHTDALEILADKDVSVISVNEGIEIK 837 A + + AA + +LFA G++A A GPVS+QAHTDAL +LAD+ V+VIS E IEI Sbjct: 718 AGNVVAAAAARGVSLFAQRNGLRAIAEGGPVSIQAHTDALAVLADQAVTVISSTESIEIL 777 Query: 838 ARQKIVLQAGQASVTLEGGNITFACPGTFSVKGATHAFPGGASVSPDLMALPDTKYKLFD 897 A++ IVL+ G + + +EG ITF SVKGA H G + LPD++ KLF+ Sbjct: 778 AQRNIVLRGGDSVIRMEGNAITFETI-KLSVKGAGHPLIGPGGRPFRIEGLPDSRVKLFE 836 Query: 898 EAF-VVKDPNGTPLSDIPYRIKSSAGD-QLAATAKDGMSERVGTEASEHVEFAMEWFKVV 955 + + + G P++++PY+I + GD T +G + RV T SE V + W ++ Sbjct: 837 QQMRAINERTGDPIANLPYKIVTEGGDVHYGTTDIEGKTIRVPTIKSEKV--TVFWGELP 894 Query: 956 PAKS 959 P KS Sbjct: 895 PYKS 898