BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5219.p (497 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777415.1| hypothetical protein Hsero_4036 [Herbaspiril... 941 0.0 ref|YP_003774169.1| hypothetical protein Hsero_0742 [Herbaspiril... 930 0.0 ref|YP_004750735.1| hypothetical protein CFU_0073 [Collimonas fu... 861 0.0 ref|YP_002007680.1| hypothetical protein RALTA_B1014 [Cupriavidu... 835 0.0 ref|YP_003749640.1| hypothetical protein RPSI07_mp0657 [Ralstoni... 825 0.0 >ref|YP_003777415.1| hypothetical protein Hsero_4036 [Herbaspirillum seropedicae SmR1] gb|ADJ65507.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 497 Score = 941 bits (2433), Expect = 0.0, Method: Composition-based stats. Identities = 485/497 (97%), Positives = 494/497 (99%) Query: 1 MSAQANTEAAASAAPAAAASTLLDDIVEQSKVAKSSSEHDRAKDLITELVSQVMEGTVVV 60 MSAQA+ EAAASAAPAAA STLLDDIVEQSKVAKSSSEHDRAKDLI+ELVSQVMEGTVVV Sbjct: 1 MSAQAHIEAAASAAPAAAGSTLLDDIVEQSKVAKSSSEHDRAKDLISELVSQVMEGTVVV 60 Query: 61 SDNLSATLDARIAELDHLISNQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKIL 120 S+NLSATLDARIAELD LIS+QVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKIL Sbjct: 61 SENLSATLDARIAELDRLISSQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKIL 120 Query: 121 NATKKELVKDFNSALEFDQSAMFKKVYEEEFGTFGGAPFGALLGDYEITRQPEDMYFIEQ 180 NATKKELVKDFNSALEFDQSAMFKKVYEEEFGTFGGAPFGALLGD+EITRQPEDMYFIEQ Sbjct: 121 NATKKELVKDFNSALEFDQSAMFKKVYEEEFGTFGGAPFGALLGDFEITRQPEDMYFIEQ 180 Query: 181 MSRIAAASHAPFITAASPELFGLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVG 240 MSRIAAASHAPFITAASPELFGLES+++LGKPRDLSKVFDTVEYAKWKSFRESEDSRYVG Sbjct: 181 MSRIAAASHAPFITAASPELFGLESFSELGKPRDLSKVFDTVEYAKWKSFRESEDSRYVG 240 Query: 241 LTLPRFLGRLPFNPKDGTTVEGFNFVEDVDGTDHSKYLWCNAAYAFGSKLTKAFEDFGWC 300 LTLPRFLGRLPFNPKDGTTVEGFNFVEDVDGTDHSKYLWCNAAYAFGSKLTKAFEDFGWC Sbjct: 241 LTLPRFLGRLPFNPKDGTTVEGFNFVEDVDGTDHSKYLWCNAAYAFGSKLTKAFEDFGWC 300 Query: 301 AAIRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTD 360 AAIRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTD Sbjct: 301 AAIRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTD 360 Query: 361 YAAFFGAQSAQKPKKYNTDAANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASN 420 YAAFFGAQSAQKPKKYN+DAANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASN Sbjct: 361 YAAFFGAQSAQKPKKYNSDAANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASN 420 Query: 421 VEDFLNRWIAQYVLLDDNATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDE 480 VEDFLNRWIAQYVLLDDNATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDE Sbjct: 421 VEDFLNRWIAQYVLLDDNATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDE 480 Query: 481 LSVSLRLVAELPQAGKS 497 LSVSLRLVAELPQAGKS Sbjct: 481 LSVSLRLVAELPQAGKS 497 >ref|YP_003774169.1| hypothetical protein Hsero_0742 [Herbaspirillum seropedicae SmR1] gb|ADJ62261.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 495 Score = 930 bits (2404), Expect = 0.0, Method: Composition-based stats. Identities = 474/497 (95%), Positives = 489/497 (98%), Gaps = 2/497 (0%) Query: 1 MSAQANTEAAASAAPAAAASTLLDDIVEQSKVAKSSSEHDRAKDLITELVSQVMEGTVVV 60 MSAQ ++E AA+ A AA+++LLDDIVEQSKVAKS+SEHDRAKDLITELV+QVMEGTVVV Sbjct: 1 MSAQLHSETAAAPA--AASASLLDDIVEQSKVAKSASEHDRAKDLITELVNQVMEGTVVV 58 Query: 61 SDNLSATLDARIAELDHLISNQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKIL 120 S NLSATLDARIAELD LIS+QVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKIL Sbjct: 59 SSNLSATLDARIAELDKLISSQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKIL 118 Query: 121 NATKKELVKDFNSALEFDQSAMFKKVYEEEFGTFGGAPFGALLGDYEITRQPEDMYFIEQ 180 NATKKELVKDFNSALEFDQSAMFKKVYEEEFGTFGGAPFG LLGD+EITRQPEDMYFIEQ Sbjct: 119 NATKKELVKDFNSALEFDQSAMFKKVYEEEFGTFGGAPFGVLLGDFEITRQPEDMYFIEQ 178 Query: 181 MSRIAAASHAPFITAASPELFGLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVG 240 MSRIAAASHAPF+TAASPELFGLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVG Sbjct: 179 MSRIAAASHAPFVTAASPELFGLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVG 238 Query: 241 LTLPRFLGRLPFNPKDGTTVEGFNFVEDVDGTDHSKYLWCNAAYAFGSKLTKAFEDFGWC 300 LTLPRFLGRLPFNPKDGTTVEGFNFVEDVDG+DHSKYLWCNAAYAFG+KLTKAFEDFGWC Sbjct: 239 LTLPRFLGRLPFNPKDGTTVEGFNFVEDVDGSDHSKYLWCNAAYAFGTKLTKAFEDFGWC 298 Query: 301 AAIRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTD 360 AAIRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTD Sbjct: 299 AAIRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTD 358 Query: 361 YAAFFGAQSAQKPKKYNTDAANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASN 420 YAAFFGAQSAQKPKKYNTD+ANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASN Sbjct: 359 YAAFFGAQSAQKPKKYNTDSANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASN 418 Query: 421 VEDFLNRWIAQYVLLDDNATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDE 480 VEDFLNRWI+QYVLLDDNATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDE Sbjct: 419 VEDFLNRWISQYVLLDDNATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDE 478 Query: 481 LSVSLRLVAELPQAGKS 497 LSVSLRLVAELPQAGKS Sbjct: 479 LSVSLRLVAELPQAGKS 495 >ref|YP_004750735.1| hypothetical protein CFU_0073 [Collimonas fungivorans Ter331] gb|AEK59912.1| hypothetical protein CFU_0073 [Collimonas fungivorans Ter331] Length = 495 Score = 861 bits (2224), Expect = 0.0, Method: Composition-based stats. Identities = 423/476 (88%), Positives = 457/476 (96%) Query: 22 LLDDIVEQSKVAKSSSEHDRAKDLITELVSQVMEGTVVVSDNLSATLDARIAELDHLISN 81 LLD IVEQSKVAKS +EHDRAKD+I+ELV+QVM+GTVVVS NLSAT+DAR+AELD LIS Sbjct: 20 LLDQIVEQSKVAKSGAEHDRAKDIISELVNQVMQGTVVVSANLSATIDARVAELDRLISA 79 Query: 82 QVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKILNATKKELVKDFNSALEFDQSA 141 QVSA++HAPEFQKLE SWTGL+YLV N+T +N KIK+LNATK+ELVKDF SALEFDQSA Sbjct: 80 QVSAVIHAPEFQKLESSWTGLHYLVFNSTTSQNLKIKVLNATKRELVKDFQSALEFDQSA 139 Query: 142 MFKKVYEEEFGTFGGAPFGALLGDYEITRQPEDMYFIEQMSRIAAASHAPFITAASPELF 201 +FKKVYEEEFGTFGGAPFG+LLGD+EITRQPEDMYF+EQMS IAAA+HAPFI++ASPELF Sbjct: 140 IFKKVYEEEFGTFGGAPFGSLLGDFEITRQPEDMYFVEQMSHIAAAAHAPFISSASPELF 199 Query: 202 GLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVGLTLPRFLGRLPFNPKDGTTVE 261 GLE+Y++LGKPRDL+KVF+TVEYAKWKSFRESEDSRYVGLTLPRFLGRLPFNPKDG TVE Sbjct: 200 GLETYSELGKPRDLAKVFETVEYAKWKSFRESEDSRYVGLTLPRFLGRLPFNPKDGQTVE 259 Query: 262 GFNFVEDVDGTDHSKYLWCNAAYAFGSKLTKAFEDFGWCAAIRGVEGGGLVEDLPTHTFK 321 GFNFVEDVDGTDHSKYLWCNAAYAFG+KLTKAFEDFGWCAAIRGVEGGGLVEDLPTHTFK Sbjct: 260 GFNFVEDVDGTDHSKYLWCNAAYAFGTKLTKAFEDFGWCAAIRGVEGGGLVEDLPTHTFK 319 Query: 322 TDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTDYAAFFGAQSAQKPKKYNTDAA 381 TDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTDYAAFFGAQS QK KKYNTD+A Sbjct: 320 TDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTDYAAFFGAQSTQKAKKYNTDSA 379 Query: 382 NANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASNVEDFLNRWIAQYVLLDDNATQ 441 NAN+VLS+QLQYIFAVSRIAHYMKSMMRDKIGSFA+A NVEDFLNRW+ QYVLLDDNA+Q Sbjct: 380 NANSVLSAQLQYIFAVSRIAHYMKSMMRDKIGSFASAGNVEDFLNRWLTQYVLLDDNASQ 439 Query: 442 EAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDELSVSLRLVAELPQAGKS 497 EAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDELSVSLRLVAELP + KS Sbjct: 440 EAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDELSVSLRLVAELPASTKS 495 >ref|YP_002007680.1| hypothetical protein RALTA_B1014 [Cupriavidus taiwanensis LMG 19424] emb|CAQ71623.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424] Length = 496 Score = 835 bits (2158), Expect = 0.0, Method: Composition-based stats. Identities = 403/494 (81%), Positives = 457/494 (92%), Gaps = 2/494 (0%) Query: 6 NTEAAASAAPAAAASTL--LDDIVEQSKVAKSSSEHDRAKDLITELVSQVMEGTVVVSDN 63 + ++AA A P A TL LD+IVEQSKVAKS +EH RAKD+I ELVSQV++GTVVVSDN Sbjct: 3 DNQSAAVAQPGVAVGTLNLLDEIVEQSKVAKSDAEHARAKDIIGELVSQVLDGTVVVSDN 62 Query: 64 LSATLDARIAELDHLISNQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKILNAT 123 LSATLDAR+AELD LIS+Q+SA+MHAPEFQKLE +W GL+YLV+ T G KIK LNAT Sbjct: 63 LSATLDARVAELDRLISSQLSAVMHAPEFQKLESTWRGLSYLVKETQTGTMIKIKALNAT 122 Query: 124 KKELVKDFNSALEFDQSAMFKKVYEEEFGTFGGAPFGALLGDYEITRQPEDMYFIEQMSR 183 K++LV+DF +A++FDQSA+FKKVYEEEFGTFGGAPFGAL+GDYEITRQPED+YFIEQMS Sbjct: 123 KRDLVRDFKTAIDFDQSALFKKVYEEEFGTFGGAPFGALIGDYEITRQPEDVYFIEQMSH 182 Query: 184 IAAASHAPFITAASPELFGLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVGLTL 243 +A+ASHAPFI +ASPEL GLE++ADLGKPRDL+KVFDTVEYAKWKSFRESEDSRYVGLT+ Sbjct: 183 VASASHAPFIASASPELLGLETFADLGKPRDLAKVFDTVEYAKWKSFRESEDSRYVGLTM 242 Query: 244 PRFLGRLPFNPKDGTTVEGFNFVEDVDGTDHSKYLWCNAAYAFGSKLTKAFEDFGWCAAI 303 PRFLGRLP+NPKDGTTVEGFNFVEDVDGTDH KYLWCNAA+AFG++LT AFEDFGWCAAI Sbjct: 243 PRFLGRLPYNPKDGTTVEGFNFVEDVDGTDHGKYLWCNAAWAFGARLTAAFEDFGWCAAI 302 Query: 304 RGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTDYAA 363 RGVEGGGLVEDLPTHTFKTD+GE+ALKCPTEIAITDRREKELSDLGFI LVHCKN+DYAA Sbjct: 303 RGVEGGGLVEDLPTHTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKNSDYAA 362 Query: 364 FFGAQSAQKPKKYNTDAANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASNVED 423 FF AQS QKPKKYNTD+ANANAVLS+QLQYIF+VSR+AHY+K+MMRDKIGSFA+A NVE Sbjct: 363 FFAAQSVQKPKKYNTDSANANAVLSAQLQYIFSVSRVAHYLKAMMRDKIGSFASAQNVES 422 Query: 424 FLNRWIAQYVLLDDNATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDELSV 483 FLNRWI+QYVLLDDNA+QE KAQFPLREAS+QVSEVPG+PG YR+V+FLRPHFQLDELS+ Sbjct: 423 FLNRWISQYVLLDDNASQEQKAQFPLREASIQVSEVPGKPGTYRSVAFLRPHFQLDELSI 482 Query: 484 SLRLVAELPQAGKS 497 SLRLVA+LP+A S Sbjct: 483 SLRLVADLPKAANS 496 >ref|YP_003749640.1| hypothetical protein RPSI07_mp0657 [Ralstonia solanacearum PSI07] emb|CBM10545.1| conserved hypothethical protein [Ralstonia solanacearum PSI07] Length = 496 Score = 825 bits (2131), Expect = 0.0, Method: Composition-based stats. Identities = 393/479 (82%), Positives = 448/479 (93%) Query: 19 ASTLLDDIVEQSKVAKSSSEHDRAKDLITELVSQVMEGTVVVSDNLSATLDARIAELDHL 78 A LLD IV+QS+VAKS +EH RAKD+I ELV+QV++GTVVVSDNLSATLDAR+AELD L Sbjct: 18 AVNLLDQIVDQSRVAKSDAEHARAKDIIGELVNQVLQGTVVVSDNLSATLDARVAELDRL 77 Query: 79 ISNQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKILNATKKELVKDFNSALEFD 138 IS+Q+SA+MH PEFQKLE +W GL+YLV+ T G KIK+LNATK++LV+DF +A++FD Sbjct: 78 ISSQLSAVMHTPEFQKLESTWRGLSYLVKETQTGTMIKIKVLNATKRDLVRDFKTAIDFD 137 Query: 139 QSAMFKKVYEEEFGTFGGAPFGALLGDYEITRQPEDMYFIEQMSRIAAASHAPFITAASP 198 QSA+FKKVYEEEFGTFGGAPFG L+GD+E+TRQPED+YFIEQMS +AAASHAPFI ++SP Sbjct: 138 QSALFKKVYEEEFGTFGGAPFGTLIGDFEVTRQPEDVYFIEQMSHVAAASHAPFIASSSP 197 Query: 199 ELFGLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVGLTLPRFLGRLPFNPKDGT 258 ELFGLES+ADLGKPRDL+KVFDTVEYAKWKSFRESEDSRYVGLT+PRFLGRLP+NPKDGT Sbjct: 198 ELFGLESFADLGKPRDLAKVFDTVEYAKWKSFRESEDSRYVGLTMPRFLGRLPYNPKDGT 257 Query: 259 TVEGFNFVEDVDGTDHSKYLWCNAAYAFGSKLTKAFEDFGWCAAIRGVEGGGLVEDLPTH 318 TVEGFNFVEDVDGTDHSKYLWCNAA+AFG++LT AFEDFGWCAAIRGVEGGGLVEDLPTH Sbjct: 258 TVEGFNFVEDVDGTDHSKYLWCNAAWAFGARLTAAFEDFGWCAAIRGVEGGGLVEDLPTH 317 Query: 319 TFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTDYAAFFGAQSAQKPKKYNT 378 TFKTD+GE+ALKCPTEIAITDRREKELSDLGFI LVHCKN+DYAAFF AQS QKPKKY+T Sbjct: 318 TFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKNSDYAAFFAAQSVQKPKKYDT 377 Query: 379 DAANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASNVEDFLNRWIAQYVLLDDN 438 D+ANANAVLS+QLQYIF+VSR+AHY+K+MMRDKIGSFA+A NVE FLNRWI+QYVLLDDN Sbjct: 378 DSANANAVLSAQLQYIFSVSRVAHYLKAMMRDKIGSFASAKNVETFLNRWISQYVLLDDN 437 Query: 439 ATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDELSVSLRLVAELPQAGKS 497 ATQE KAQFPLREAS+QVSEVPG+PG YR+V+FLRPHFQLDELS+SLRLVA+LP+ S Sbjct: 438 ATQEQKAQFPLREASIQVSEVPGKPGTYRSVAFLRPHFQLDELSISLRLVADLPKPTNS 496