BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5218.p (163 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774170.1| hypothetical protein Hsero_0743 [Herbaspiril... 310 3e-83 ref|YP_003777414.1| hypothetical protein Hsero_4035 [Herbaspiril... 306 8e-82 ref|YP_004753864.1| hypothetical protein CFU_3217 [Collimonas fu... 255 1e-66 ref|YP_004751346.1| hypothetical Protein CFU_0688 [Collimonas fu... 253 1e-65 ref|YP_004750734.1| putative cytoplasmic protein USSDB7A [Collim... 251 3e-65 >ref|YP_003774170.1| hypothetical protein Hsero_0743 [Herbaspirillum seropedicae SmR1] emb|CAP19682.1| hypothetical protein HS279.0505 [Herbaspirillum seropedicae] gb|ADJ62262.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 163 Score = 310 bits (795), Expect = 3e-83, Method: Composition-based stats. Identities = 161/163 (98%), Positives = 161/163 (98%) Query: 1 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF Sbjct: 1 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 Query: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVAPSIESG 120 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSV PSIESG Sbjct: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESG 120 Query: 121 EILNEVVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKVI 163 EILNE VGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKVI Sbjct: 121 EILNETVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKVI 163 >ref|YP_003777414.1| hypothetical protein Hsero_4035 [Herbaspirillum seropedicae SmR1] emb|CAP19687.1| hypothetical protein HS284.0971 [Herbaspirillum seropedicae] gb|ADJ65506.1| Conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 163 Score = 306 bits (784), Expect = 8e-82, Method: Composition-based stats. Identities = 158/163 (96%), Positives = 160/163 (98%) Query: 1 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 MAIDVY+QIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF Sbjct: 1 MAIDVYIQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 Query: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVAPSIESG 120 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSV PSIESG Sbjct: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESG 120 Query: 121 EILNEVVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKVI 163 EILNE VGLKYSTVKWKYTQQK+ GGTAGNTSGGWDLSTNKVI Sbjct: 121 EILNETVGLKYSTVKWKYTQQKQGGGTAGNTSGGWDLSTNKVI 163 >ref|YP_004753864.1| hypothetical protein CFU_3217 [Collimonas fungivorans Ter331] gb|AEK63041.1| hypothetical protein CFU_3217 [Collimonas fungivorans Ter331] Length = 163 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 136/162 (83%), Positives = 147/162 (90%) Query: 1 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 MAIDVYLQIDGIKGESTDD+HKDWIECK+V WEVLQPKSATAST GGHTAERCEHKDIV Sbjct: 1 MAIDVYLQIDGIKGESTDDIHKDWIECKSVQWEVLQPKSATASTAGGHTAERCEHKDIVI 60 Query: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVAPSIESG 120 TK+ADLASPLLLQN SSGKTIPKAKFEF+RADGKGER+RYFEIEL N++IS VAPS+ G Sbjct: 61 TKLADLASPLLLQNCSSGKTIPKAKFEFLRADGKGERIRYFEIELENLLISDVAPSVTEG 120 Query: 121 EILNEVVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKV 162 +L+E V LKYS VKWKYTQQK GG+ GNTSGGWDLSTNKV Sbjct: 121 SVLSETVSLKYSKVKWKYTQQKIAGGSGGNTSGGWDLSTNKV 162 >ref|YP_004751346.1| hypothetical Protein CFU_0688 [Collimonas fungivorans Ter331] gb|AEK60523.1| Hypothetical Protein CFU_0688 [Collimonas fungivorans Ter331] Length = 163 Score = 253 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 132/163 (80%), Positives = 148/163 (90%) Query: 1 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 MAIDVYLQIDGIKGESTD HKDWIECK+V WEVLQPKSATASTGGGHTAERCEHKDIV Sbjct: 1 MAIDVYLQIDGIKGESTDSAHKDWIECKSVQWEVLQPKSATASTGGGHTAERCEHKDIVL 60 Query: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVAPSIESG 120 TK+ADLA+PLLLQN SSGKTIPKAKFEF+RADGKG+R++YFEIEL N++IS V PS++ G Sbjct: 61 TKIADLATPLLLQNCSSGKTIPKAKFEFLRADGKGDRIKYFEIELVNLLISDVTPSVQEG 120 Query: 121 EILNEVVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKVI 163 ++L+E V LKYS VKWKYTQQK GG+ GNTSGGWDLSTNKV+ Sbjct: 121 DVLSETVSLKYSQVKWKYTQQKIGGGSGGNTSGGWDLSTNKVV 163 >ref|YP_004750734.1| putative cytoplasmic protein USSDB7A [Collimonas fungivorans Ter331] gb|AEK59911.1| Putative cytoplasmic protein USSDB7A [Collimonas fungivorans Ter331] Length = 163 Score = 251 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 131/163 (80%), Positives = 148/163 (90%) Query: 1 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 MAIDVYLQIDGIKGESTD HKDWIECK+V WEVLQPKSATASTGGGHTAERCEHKDIV Sbjct: 1 MAIDVYLQIDGIKGESTDSAHKDWIECKSVQWEVLQPKSATASTGGGHTAERCEHKDIVV 60 Query: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVAPSIESG 120 TK+ADLA+PLLLQN SSGKTIPKAKFEF+RADGKG+R++YFEIEL N++IS V PS++ G Sbjct: 61 TKIADLATPLLLQNCSSGKTIPKAKFEFLRADGKGDRIKYFEIELVNLLISDVTPSVQEG 120 Query: 121 EILNEVVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKVI 163 ++L+E + LKYS VKWKYTQQK GG+ GNTSGGWDLSTNKV+ Sbjct: 121 DVLSESISLKYSQVKWKYTQQKIGGGSGGNTSGGWDLSTNKVV 163