BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5217.p (162 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777413.1| hypothetical protein Hsero_4034 [Herbaspiril... 265 2e-69 ref|YP_003774171.1| hypothetical protein Hsero_0744 [Herbaspiril... 250 4e-65 ref|YP_004750733.1| hypothetical protein CFU_0071 [Collimonas fu... 218 3e-55 ref|YP_003749642.1| secretion system protein (evpe-like) [Ralsto... 181 4e-44 ref|YP_004359062.1| hypothetical protein bgla_1g04130 [Burkholde... 175 2e-42 >ref|YP_003777413.1| hypothetical protein Hsero_4034 [Herbaspirillum seropedicae SmR1] gb|ADJ65505.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 162 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 140/162 (86%), Positives = 152/162 (93%) Query: 1 MKGFAPSLFDKLMNDGPRSSFSPVVSRLSLEELKDAVARDLEAMLNTRSVVPEELLQQYP 60 MKGFAPSLFDKLM++GPR+S V++RLS+EELKD VARDLEAMLNTRSV+ E L+Q+P Sbjct: 1 MKGFAPSLFDKLMSEGPRASVGAVINRLSIEELKDVVARDLEAMLNTRSVIAEASLEQFP 60 Query: 61 ECSTSIIAYGLNDFAGMSLASLDDRTAICHSLEEAISRHEPRLRNVKATLEIQEGSINRL 120 ECS SII YGLNDFAGMSLASLDDR+AICHSLEEAI+RHEPRLR VKATLEIQ+GSINRL Sbjct: 61 ECSNSIITYGLNDFAGMSLASLDDRSAICHSLEEAITRHEPRLRGVKATLEIQDGSINRL 120 Query: 121 NFAISALLVVNAARETVNFDAVLQPSTLQYSISKSRTTRIGV 162 NFAISALLVVNAARETVNFDAVLQPSTLQYSISKSRTTRIGV Sbjct: 121 NFAISALLVVNAARETVNFDAVLQPSTLQYSISKSRTTRIGV 162 >ref|YP_003774171.1| hypothetical protein Hsero_0744 [Herbaspirillum seropedicae SmR1] gb|ADJ62263.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 162 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 133/162 (82%), Positives = 149/162 (91%) Query: 1 MKGFAPSLFDKLMNDGPRSSFSPVVSRLSLEELKDAVARDLEAMLNTRSVVPEELLQQYP 60 MKGFAPSLFD+LM++ R S + VVSRLS+EELKDAVARDLEAMLNTR+V+PE+L + +P Sbjct: 1 MKGFAPSLFDRLMHESDRVSPNTVVSRLSIEELKDAVARDLEAMLNTRAVIPEQLFRHFP 60 Query: 61 ECSTSIIAYGLNDFAGMSLASLDDRTAICHSLEEAISRHEPRLRNVKATLEIQEGSINRL 120 ECS SIIAYGLNDFAGMSLASLDDR AIC SLEEAI+RHEPRLRNV+A+LE+QEGSINRL Sbjct: 61 ECSKSIIAYGLNDFAGMSLASLDDRAAICRSLEEAIARHEPRLRNVRASLEVQEGSINRL 120 Query: 121 NFAISALLVVNAARETVNFDAVLQPSTLQYSISKSRTTRIGV 162 NFAISALLVVNAARE V+FDAVLQPS+LQYSISK R TRIGV Sbjct: 121 NFAISALLVVNAAREAVSFDAVLQPSSLQYSISKGRATRIGV 162 >ref|YP_004750733.1| hypothetical protein CFU_0071 [Collimonas fungivorans Ter331] gb|AEK59910.1| protein of unknown function DUF1316 [Collimonas fungivorans Ter331] Length = 163 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 109/156 (69%), Positives = 132/156 (84%) Query: 1 MKGFAPSLFDKLMNDGPRSSFSPVVSRLSLEELKDAVARDLEAMLNTRSVVPEELLQQYP 60 MKGF P LFD+LM + S +V RLS++ LKD VARDLEAMLNTR+V+PEELL+ +P Sbjct: 1 MKGFTPGLFDRLMGGDNTPAQSDLVVRLSMDALKDTVARDLEAMLNTRTVIPEELLKNFP 60 Query: 61 ECSTSIIAYGLNDFAGMSLASLDDRTAICHSLEEAISRHEPRLRNVKATLEIQEGSINRL 120 ECS SI+ YGLNDF+GMSLASLDDR IC LE+ I+RHEPRLRNV+A+LE++EGSINRL Sbjct: 61 ECSKSILTYGLNDFSGMSLASLDDRAHICQCLEQGIARHEPRLRNVRASLELREGSINRL 120 Query: 121 NFAISALLVVNAARETVNFDAVLQPSTLQYSISKSR 156 NFAI+A+LVV A+E V+FDAVLQPSTLQYSIS++R Sbjct: 121 NFAIAAMLVVGPAKEAVSFDAVLQPSTLQYSISRAR 156 >ref|YP_003749642.1| secretion system protein (evpe-like) [Ralstonia solanacearum PSI07] emb|CBJ35004.1| putative secretion system protein (EvpE-like) [Ralstonia solanacearum PSI07] Length = 157 Score = 181 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 94/156 (60%), Positives = 115/156 (73%) Query: 1 MKGFAPSLFDKLMNDGPRSSFSPVVSRLSLEELKDAVARDLEAMLNTRSVVPEELLQQYP 60 MKGF PSL DKL +D P + + +LSLEELK VARD+E++LNTR V EE LQ P Sbjct: 1 MKGFEPSLLDKLFDDEPHAPMPTALRQLSLEELKSTVARDIESLLNTRIVFEEEDLQGLP 60 Query: 61 ECSTSIIAYGLNDFAGMSLASLDDRTAICHSLEEAISRHEPRLRNVKATLEIQEGSINRL 120 EC S++ YGLNDFAG+SLAS DR IC SL +AI RHEPRL++V +LEI E + N L Sbjct: 61 ECKRSLLTYGLNDFAGLSLASFYDRNYICQSLTKAIERHEPRLQHVSVSLEINERATNAL 120 Query: 121 NFAISALLVVNAARETVNFDAVLQPSTLQYSISKSR 156 F ISA+L+V ARE VNFDA+LQPSTL+YS+S+ R Sbjct: 121 CFGISAVLLVGPAREPVNFDAMLQPSTLRYSVSRGR 156 >ref|YP_004359062.1| hypothetical protein bgla_1g04130 [Burkholderia gladioli BSR3] gb|AEA59106.1| hypothetical protein bgla_1g04130 [Burkholderia gladioli BSR3] Length = 160 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 89/160 (55%), Positives = 116/160 (72%) Query: 1 MKGFAPSLFDKLMNDGPRSSFSPVVSRLSLEELKDAVARDLEAMLNTRSVVPEELLQQYP 60 MK F PS DKL +D P SP + +LSL+ELK VARD+E++LNTR + +E L P Sbjct: 1 MKRFEPSFLDKLFDDEPHQPASPAMRQLSLDELKSTVARDVESILNTRIALTDEDLHALP 60 Query: 61 ECSTSIIAYGLNDFAGMSLASLDDRTAICHSLEEAISRHEPRLRNVKATLEIQEGSINRL 120 EC S++ YGLNDFAG+SLAS DR IC S+++AI RHEPRLR V + E+ E S N L Sbjct: 61 ECQQSVLTYGLNDFAGLSLASHYDRAFICKSIQQAIDRHEPRLRQVAVSFELNEQSTNSL 120 Query: 121 NFAISALLVVNAARETVNFDAVLQPSTLQYSISKSRTTRI 160 NFAI A+LVV+ A+E V+FDA+LQPSTLQYS+++ R ++ Sbjct: 121 NFAIRAMLVVHPAQEPVSFDAMLQPSTLQYSVTRGRAAKV 160