BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5210.p (662 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04613169.1| ATPase involved in DNA repair [Yersinia rohde... 310 6e-82 ref|ZP_07949963.1| hypothetical protein HMPREF0864_00726 [Entero... 291 3e-76 ref|ZP_05969940.2| hypothetical protein ENTCAN_08605 [Enterobact... 289 9e-76 ref|YP_002920058.1| hypothetical protein KP1_3382 [Klebsiella pn... 265 2e-68 ref|ZP_06548308.1| hypothetical protein HMPREF0485_00708 [Klebsi... 218 4e-54 >ref|ZP_04613169.1| ATPase involved in DNA repair [Yersinia rohdei ATCC 43380] gb|EEQ02319.1| ATPase involved in DNA repair [Yersinia rohdei ATCC 43380] Length = 740 Score = 310 bits (794), Expect = 6e-82, Method: Composition-based stats. Identities = 239/713 (33%), Positives = 354/713 (49%), Gaps = 107/713 (15%) Query: 5 VDDFQQANIGLSQAIAAFGNFKGSDPIAKANA---EKAVTNAEQQVKKANDALREKISKL 61 VD+ QA+ S AI +G S P A+ E V+ AE+ ++ AL +K+ K Sbjct: 61 VDEHHQASEDYSFAIEKYG-ITYSQPAKNADLASLENKVSIAEKTLEIKKKALLKKLGKF 119 Query: 62 TDISNGGTAIVELIPI----RQLKGDGRGSRTPSGQR--QAQYGRKMTYVVPERIKPHWR 115 D G IVELIPI Q G+GS+ ++ + G+ + + V + Sbjct: 120 NDSGAGYEKIVELIPIATKNNQSGKKGKGSKYIYVKKAYKDNLGKGIKHTVSLK------ 173 Query: 116 TYSLTSKKDTQSGHKSALKKDANGKY-KIDKEKLTEQL-RTIKPKIKAD----FYNF-DE 168 KD S +S K+D G ID +K+ EQL + +K ++K D F N D Sbjct: 174 ------AKDKTSSPESIFKRDKKGNITNIDTKKMKEQLAKQVKKELKLDTAIQFLNAKDI 227 Query: 169 HAVTGVLGDWAEKWNANLKVSYASNHVDLSGQAQLMRYMAGVGASTEWEPTEGKIGLKAE 228 + VL WA+ WNA +VD+S AQ MR+ + +GAS EW+P GK+ LKAE Sbjct: 228 VKIDAVLTGWADCWNA-------GENVDISAGAQFMRFTSNLGASGEWDPINGKLKLKAE 280 Query: 229 AKADFALAEAKGAMKLFAPHRLGWVWQFSASDGKTYP--LGAVRAEFGISLSGIVGASAV 286 A ++A K+F P R+GW +F+ + G+T P +G +R SL G GASA Sbjct: 281 FGAALSVASGTADAKIFMPDRIGWPLKFTPT-GRTSPVNMGMLRVYLQASLIGFAGASAQ 339 Query: 287 AELGCELKIEPKKIGLRGVPPPNRRL----------------FSVNDEGVQIAGRDTEIT 330 AE ++ K L G PN RL NDEG+ +G Sbjct: 340 AEAQFQITTINSKQVLMG--KPNERLPRFSERRVKGAEFHKKMDENDEGISASGE----- 392 Query: 331 PAKAELGVFAGAKADADVSGAIQWLNP-------------EDKAQKFKDFAKIAPGVSAM 377 +F GA+AD +SG +QWL P + A ++ DF I+ + M Sbjct: 393 -------IFGGARADFTLSGGVQWLQPPALSSHQGKTDEQAEAATEYVDFCSISESIVGM 445 Query: 378 AGAGISAKLELTYIDGKFRFLMSASLCVGVGAKGKIKFEVDARLIGEFMVWVFYQLYHAN 437 AG GI + +++GKF F ++ASLCVG+GAKG K V + +F W+ YQLY + Sbjct: 446 AGIGIGGTFQCDFVNGKFCFKIAASLCVGLGAKGSFKASVSYDKLRDFGNWLAYQLYGVD 505 Query: 438 YEVLAFIRREAFAAITDIQFLVIQSGQN----AAKFLLDDLTQIQA----YVDAVIKNFE 489 Y L I ++AF + I +++ ++ ++L + +I A ++D++ + Sbjct: 506 YAFLELITKDAFKTFSKICVMLLSDIKSDIIKELRYLTGSIEKIDAQFSQFIDSIDAGLK 565 Query: 490 ASERRNALAANVLSNPKMLRISTPEAKGMLLYQLTRHGKADWLDNGN----YIGLDAYHQ 545 AS++RNALA N+L+ P+ L TPE+KG+LLY LTRH AD +D GN +I D YH Sbjct: 566 ASQKRNALANNILAAPQSLLSYTPESKGILLYLLTRHATADHIDIGNRGDGFIP-DIYHD 624 Query: 546 RKKAVLLILSWTQTLADFQNVLQHLTARGSK-----------TTEDTRSHLKRFLQLGVN 594 RKKA+++IL+ QT ++ V H TA GS + + L+ FLQ G+N Sbjct: 625 RKKAIIVILTTIQTQREWFQVFSHRTADGSDLANGNSALKYIVAQKQMNELREFLQEGIN 684 Query: 595 DMDDELDTIERRLKRQPSRGYAVAMNDSPRYDFLRGDNPNFTMLAQVEPINQI 647 D E+D I +RLK P+ GYA+AMN++ Y +NP + + Q P N I Sbjct: 685 K-DKEMDKIYKRLKETPAWGYALAMNNTLVYQLHSENNPFYPQMGQFGPRNDI 736 >ref|ZP_07949963.1| hypothetical protein HMPREF0864_00726 [Enterobacteriaceae bacterium 9_2_54FAA] gb|EFV42397.1| hypothetical protein HMPREF0864_00726 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 749 Score = 291 bits (745), Expect = 3e-76, Method: Composition-based stats. Identities = 213/682 (31%), Positives = 333/682 (48%), Gaps = 67/682 (9%) Query: 5 VDDFQQANIGLSQAIAAFGNFKGSDPIAKA---NAEKAVTNAEQQVKKANDALREKISKL 61 VD+ +A+ S A+ +G S P A N E V AE+ +++ DAL+ + Sbjct: 61 VDEHHKASENYSAALENYGKVY-SQPEKSAELDNLENEVVAAEKILQEKKDALQSTLGDF 119 Query: 62 TDISNGGTAIVELIPIRQLK--GDGRGSRTPSGQRQAQYGRKMTYVVPERIKPHWRTYSL 119 G +VELIPI K G RG + + Y K+ V ++K Sbjct: 120 EATGAGYKEVVELIPIATKKKPGSKRGVGSRYAFVKKGYIDKLGVGVRHKVK-------- 171 Query: 120 TSKKDTQSGHKSALKKDANGKYK-IDKEKLTEQLRTIKPK---IKADFYNFDEHAVTGVL 175 + KD S +S +D N K I+ +K+ QL+ + IK F D V L Sbjct: 172 ITGKDKASASESIFTRDGNKNIKGINTQKIKNQLKELDSDNTGIKY-FSAEDIGKVDKTL 230 Query: 176 GDWAEKWNANLKVSYASN---HVDLSGQAQLMRYMAGVGASTEWEPTEGKIGLKAEAKAD 232 DWA+ WN +L + ++ ++D+S AQ +R+ + GAS EW+P +GK+ K E + Sbjct: 231 TDWADSWNKSLARANETDVNANIDVSAGAQFLRFTSNSGASGEWDPYDGKLSFKVEHSSV 290 Query: 233 FALAEAKGAMKLFAPHRLGWVWQFSASDG-KTYPLGAVRAEFGISLSGIVGASAVAELGC 291 ++A + K + P R+GW +++A D K +G +R F SL G GASA E Sbjct: 291 LSIASGTVSAKFYMPDRIGWPLKYAAEDRVKPLDMGMLRVYFETSLIGFAGASAQVESQI 350 Query: 292 ELKIEPKKIGLRGVPPP------NRRLFSVNDEGVQIAGRDTEITPAKAELGVFAGAKAD 345 ++ K + G+ P RR+ + + E A AE +F GAKA Sbjct: 351 QVTTIGTKQVVMGIREPELPRFRQRRVTGAQFHNARKGKNEDEGLTASAE--IFGGAKAT 408 Query: 346 ADVSGAIQWLNPE-------------DKAQKFKDFAKIAPGVSAMAGAGISAKLELTYID 392 ++G +QWL P+ A +F DF I+ + MAG GI + +++ Sbjct: 409 LKLAGGVQWLQPKALTEYQGKTGEKAKAAAEFVDFCSISESLVGMAGLGIGGTFKCDFVN 468 Query: 393 GKFRFLMSASLCVGVGAKGKIKFEVDARLIGEFMVWVFYQLYHANYEVLAFIRREAFAAI 452 G+F F ++ASLCVGVGAKG + VD + +F W+ YQLY +Y + +EAF+A Sbjct: 469 GRFCFKIAASLCVGVGAKGSFEAAVDYDKLSDFGGWLIYQLYGLDYAFFELVTKEAFSAF 528 Query: 453 TDIQFLVIQSGQNAAKFLLDDLT--------QIQAYVDAVIKNFEASERRNALAANVLSN 504 + + +++ ++ K L + +V ++ + EAS++RN LA N++S+ Sbjct: 529 SKVCVMMLTDMESEIKEFLKSTKATVITIEEKFSDFVASIEQGLEASKKRNQLALNIISD 588 Query: 505 PKMLRISTPEAKGMLLYQLTRHGKADWLDN---GNYIGLDAYHQRKKAVLLILSWTQTLA 561 + L TPE+KGML+Y LTRHG AD +D G+ I D Y RK A+++IL+ QT Sbjct: 589 KQCLLSYTPESKGMLIYLLTRHGLADHIDTDNRGDEIIPDIYSDRKNAIIIILASIQTQK 648 Query: 562 DFQNVLQHLTARGSK-----------TTEDTRSHLKRFLQLGVNDMDDELDTIERRLKRQ 610 ++ V H TA GS ++ ++L+ FLQ G+N D E++TI RRL+ Sbjct: 649 EWFEVFSHCTADGSSLSGGNPALKYMVSQKQMNNLRDFLQEGMN-RDHEMETIYRRLRVN 707 Query: 611 PSRGYAVAMNDSPRYDFLRGDN 632 P+ GY + N+S Y G N Sbjct: 708 PAWGYPLVWNNSEAYRLYNGVN 729 >ref|ZP_05969940.2| hypothetical protein ENTCAN_08605 [Enterobacter cancerogenus ATCC 35316] gb|EFC54349.1| hypothetical protein ENTCAN_08605 [Enterobacter cancerogenus ATCC 35316] Length = 742 Score = 289 bits (740), Expect = 9e-76, Method: Composition-based stats. Identities = 224/693 (32%), Positives = 328/693 (47%), Gaps = 73/693 (10%) Query: 5 VDDFQQANIGLSQAIAAFGNFKG-SDPIAKANA-EKAVTNAEQQVKKANDALREKISKLT 62 VD+ +AN S AI A+ + D +++ E V AEQ++ + L+ ++ Sbjct: 65 VDEVHKANKIYSSAIEAYRKVQPYPDRVSELTLLEAKVAEAEQKLADKKEELQNRLGDFE 124 Query: 63 DISNGGTAIVELIPIRQLKGDGRGSRTPSGQRQAQYGRKMTYVVPERIKPHWRTYSL--- 119 G +VELIPI+ ++ G RQ G + YV I ++ T + Sbjct: 125 SGGAGYEEVVELIPIK--------TKKQQGGRQG-IGSRYVYVKKSYID-NFGTGGIHRV 174 Query: 120 -TSKKDTQSGHKSALKKDANGKYK-IDKEKLTEQLRTIKPKIKA-DFYNF-DEHAVTGVL 175 +D S +S +DANG K I+ K+ EQL+ I+ + K F+ D + L Sbjct: 175 SLRGRDRSSAQESIFNRDANGNIKSINIPKIKEQLKKIESENKGVKFFEVKDIGNIDNTL 234 Query: 176 GDWAEKWNANLKVSYASNH-VDLSGQAQLMRYMAGVGASTEWEPTEGKIGLKAEAKADFA 234 DWA WN + NH +D+S AQ +R+ + GAS EW+P GK LKAE + Sbjct: 235 CDWATSWNKD-----EDNHNIDVSAGAQFLRFASNTGASGEWDPYNGKATLKAEHSTVLS 289 Query: 235 LAEAKGAMKLFAPHRLGWVWQFSASDGKTYPL--GAVRAEFGISLSGIVGASAVAELGCE 292 +A + P +GW + GK+ L G R SL G GAS L E Sbjct: 290 VASGTAVATFYMPDSIGWSLKMLPPPGKSKVLNMGMWRIYLETSLIGFAGAS----LQVE 345 Query: 293 LKIEPKKIGLR--------GVPPPNRRLFSVNDEGVQIAGRDTEITPAKAELGVFAGAKA 344 +++ IG + G P R S A R+ A A +FAGA+A Sbjct: 346 AQVQVTTIGAKQAIIGNREGRLPRFRNRHSPTGAAFHQA-REQNEEGASASAEIFAGARA 404 Query: 345 DADVSGAIQWLNPED-------------KAQKFKDFAKIAPGVSAMAGAGISAKLELTYI 391 + + G +QWL P + +A +F DF I+ V M G G K + +I Sbjct: 405 EFKMKGGVQWLQPLELTAHQGKTGDEAKEAAEFVDFCSISEAVVGMVGFGAGGKFQCDFI 464 Query: 392 DGKFRFLMSASLCVGVGAKGKIKFEVDARLIGEFMVWVFYQLYHANYEVLAFIRREAFAA 451 +G+F F ++ASLC+G GAKG + EVD +F W+ YQLY +Y I +EAF A Sbjct: 465 NGRFCFSIAASLCLGAGAKGSFEAEVDYDKFYDFGYWLVYQLYGLDYSFFDVISKEAFGA 524 Query: 452 ITDIQFLVIQSGQNAAKFLLDD----LTQIQAYVDAVIKNFEA----SERRNALAANVLS 503 T I L + + ++ ++ L D L +I++ + FE S++RN +A N+L Sbjct: 525 YTKICILFLTNMKSQVEYELKDFKSSLDKIESRFYDAVNYFEKGMVESKKRNEIANNILM 584 Query: 504 NPKMLRISTPEAKGMLLYQLTRHGKADWLDNGNYIGLDAYHQRKKAVLLILSWTQTLADF 563 +PK L TPEAKG+L+Y LTRHG D D N + LD YH RK+A+L IL QT ++ Sbjct: 585 DPKYLLRVTPEAKGILIYLLTRHGFNDHRDWDNRVMLDIYHNRKEAILTILDSIQTQREW 644 Query: 564 QNVLQHLTARGSK-----------TTEDTRSHLKRFLQLGVNDMDDELDTIERRLKRQPS 612 V H A GS + + L+ FLQ GVN D E+D I +RLK PS Sbjct: 645 FQVFSHCNADGSDLAAGNSALKYMIAQKKMNDLREFLQEGVNK-DKEMDKIYKRLKTSPS 703 Query: 613 RGYAVAMNDSPRYDFLRGDNPNFTMLAQVEPIN 645 GYA++MN++ Y DN + + P+N Sbjct: 704 WGYALSMNNTEFYRLYTMDNDFYPKSMKFSPVN 736 >ref|YP_002920058.1| hypothetical protein KP1_3382 [Klebsiella pneumoniae NTUH-K2044] dbj|BAH63991.1| hypothetical protein KP1_3382 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 753 Score = 265 bits (677), Expect = 2e-68, Method: Composition-based stats. Identities = 206/613 (33%), Positives = 295/613 (48%), Gaps = 106/613 (17%) Query: 37 EKAVTNAEQQVKKANDALREKISKLT-----------DISNGGTAIVELIPIRQLKGDGR 85 E +T A + + KAN ALR+++ LT + + I+ELIP++ Sbjct: 88 ESEITKAYEALNKANQALRKELMSLTANPPEGELLNDKMKDTAVGIMELIPLKN------ 141 Query: 86 GSRTPSGQRQAQYGRKMTYVVPERIKPHWRTYSLTSKKDTQSGHKSALK--------KDA 137 G K TYV ++IK WRTY L S+ D +SG S +K +DA Sbjct: 142 ---------NTVKGFKKTYVRSDKIKHQWRTYKL-SEVDKKSGEASFIKYKNKTIVSQDA 191 Query: 138 NGKY--------KIDKEKLTEQLRTIKPKIKADFYNFDEHAVTGVLGDWAEKWNANL--- 186 NG KID +L +QL + +K D D+ V ++ WAE+ N +L Sbjct: 192 NGNQVNKTIRQGKIDTAELKKQLSNVPVSLKFDL--VDDTNV--IVSHWAEEMNKSLTWP 247 Query: 187 ----KVSYASNH--VDLSGQAQLMRYMAGVGASTEWEPTEGKIGLKAEAKADFALAEAKG 240 KV + H VD+S QAQLMRY G GAS E+ P+E K+ K E A FAL EAK Sbjct: 248 KGDGKVDESVYHQYVDISAQAQLMRYSHGAGASAEYNPSEKKLEGKIEGHASFALGEAKA 307 Query: 241 AMKLFAPHRLGWVWQFSASDGKTYP--------LGAVRAEFGISLSGIVGASAVAELGCE 292 L+ P RLG F A K P +GA+R + LSG VGASA ELG Sbjct: 308 ETALYLPDRLGVSLLFPAK--KVTPQIPDGVCNMGALRFAMKLVLSGSVGASAAIELGVT 365 Query: 293 LKIEP---KKIGLRGVPPPNRRLFSVNDEGVQIAGRDTEITP---AKAELGVFAGAKADA 346 K G++G P L + G Q T P E+GVF GA+A Sbjct: 366 ADWSGEMGKGYGIKGRPAT---LTAPPLPGQQQVNLKTSTIPEAQGGGEIGVFVGAQAGG 422 Query: 347 DVSGAIQWLNPE------------------DKAQKFKDFAKIAPGVSAMAGAGISAKLEL 388 ++SGAI+W +P +K +KF AK+ G++ AGAG S + Sbjct: 423 NISGAIEWFDPHPDDTPVAIGVEKDNKPLVNKEKKFAAIAKLEAGMTVQAGAGGSGVFYI 482 Query: 389 TYIDGKFRFLMSASLCVGVGAKGKIKFEVDARLIGEFMVWVFYQLYHANYEVL-AFIRRE 447 TYI G+FR A+LC GVGAKG++ FEVD FM + L + +Y+ L + + Sbjct: 483 TYIQGRFRIYCKAALCWGVGAKGEVGFEVDGSSFAAFMKSFMFMLRNVDYQKLEQMMAGD 542 Query: 448 AFAAITDIQFLVIQSGQNAAKFLLDDLTQIQAYVDAVIKNFEASERRNALAANVLSNPKM 507 AF ++ I ++ G AA+ +LDD+ + + I + +R L ++LSNP Sbjct: 543 AFRSLCAIPIIMAAQGVQAAEAMLDDMLAVLQRIQTDILD---ENKRVYLMNSILSNPDQ 599 Query: 508 LRISTPEAKGMLLYQLTRHGKADWLD----NGNYIGLDAY-----HQRKKAVLLILSWTQ 558 L+ + PE KG ++ L ADWLD N ++ ++++ +RK+AV + L W Q Sbjct: 600 LKYTPPETKGAVIATLIDQNWADWLDPRNQNNDFFSVNSWKLGPLKRRKQAVFMALKWIQ 659 Query: 559 TLADFQNVLQHLT 571 + AD+ NV+QHLT Sbjct: 660 SQADYNNVMQHLT 672 >ref|ZP_06548308.1| hypothetical protein HMPREF0485_00708 [Klebsiella sp. 1_1_55] gb|EFD86328.1| hypothetical protein HMPREF0485_00708 [Klebsiella sp. 1_1_55] Length = 514 Score = 218 bits (554), Expect = 4e-54, Method: Composition-based stats. Identities = 150/433 (34%), Positives = 216/433 (49%), Gaps = 50/433 (11%) Query: 181 KWNANLKVSYASNHVDLSGQAQLMRYMAGVGASTEWEPTEGKIGLKAEAKADFALAEAKG 240 K + + S +VD+S QAQLMRY G GAS E+ P+E K+ K E A FAL EAK Sbjct: 9 KGDGKVDESVYHQYVDISAQAQLMRYSHGGGASAEYNPSEKKLEGKIEGHASFALGEAKA 68 Query: 241 AMKLFAPHRLGWVWQFSASDGKTYP--------LGAVRAEFGISLSGIVGASAVAELGCE 292 L+ P RLG F A K P +GA+R + LSG VGASA ELG Sbjct: 69 ETALYLPDRLGVSLLFPAK--KVTPQTPDGVCNMGALRFAMKLVLSGSVGASAAIELGVT 126 Query: 293 LKIEP---KKIGLRGVPPPNRRLFSVNDEGVQIAGRDTEITP---AKAELGVFAGAKADA 346 + K G++G P L + G Q T P E+GVF GA+A Sbjct: 127 VDWSGEMGKGYGIKGRPAT---LTAPPLPGQQQVNLKTSTIPEAQGGGEIGVFVGAQAGG 183 Query: 347 DVSGAIQWLNPE------------------DKAQKFKDFAKIAPGVSAMAGAGISAKLEL 388 ++SGAI+W +P +K +KF AK+ G++ AGAG S + Sbjct: 184 NISGAIEWFDPHPDDTPVAKGVEKDNKPIVNKEKKFAAIAKLEAGMTVQAGAGGSGVFYI 243 Query: 389 TYIDGKFRFLMSASLCVGVGAKGKIKFEVDARLIGEFMVWVFYQLYHANYEVL-AFIRRE 447 TYI G+FR A+LC GVGAKG++ FEVD FM Y L + +Y+ L + + Sbjct: 244 TYIQGRFRIYCKAALCWGVGAKGEVGFEVDGSSFAAFMKSFLYMLRNVDYQKLEQMMAGD 303 Query: 448 AFAAITDIQFLVIQSGQNAAKFLLDDLTQIQAYVDAVIKNFEASERRNALAANVLSNPKM 507 AF ++ I ++ G A + +L ++ I ++ + E +R L ++LSNP Sbjct: 304 AFRSLCAIPIIMAAQGIQAGEAMLKNMGIILRRIET---DLEDENKRVHLMNSILSNPDQ 360 Query: 508 LRISTPEAKGMLLYQLTRHGKADWLD----NGNYIGLDAY-----HQRKKAVLLILSWTQ 558 L+ + PE KG ++ L DWLD N ++ ++++ +RK+AV + L W Q Sbjct: 361 LKYTPPETKGAVIATLIDQNWVDWLDPRNQNNDFFSVNSWKLGPLKRRKQAVFMALKWIQ 420 Query: 559 TLADFQNVLQHLT 571 + AD+ NV+QHLT Sbjct: 421 SQADYNNVMQHLT 433